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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch3:4080355..4081201- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_004154-T1 ID=KJC3_004154-T1|Name=KJC3_004154-T1|organism=Aspergillus niger KJC3|type=mRNA|length=847bp|location=Sequence derived from alignment at ch3:4080355..4081201- (Aspergillus niger KJC3)
ATGGTGTCTTTCCTTGGCCAAGCACGCCTAGCCGTGCCAATCCTGTCAGC
TTTTGCGTGCATGCTTGCGGCAAGTTCCGCGATCCCCCCACCACCGCGTG
GAGCTCTTTCACCCGAACGTCTGCAATGGATTAGAGAGGTGATCGGCAAT
CAGACTGAGAACGACAGCGTTTCGGACCTTGCTAAGCGGAGCACTGTCCT
GTCTACCAGCCAAGACGGAGTTGACAGCGCCGGATTCTACTACTCAGTGT
ACAATGACAACGGGGCCGATGTCGGATACACCGAATACCCCACGACCGGC
CAGTTCGAACTTGGCTGGAGTGCTGAGGCGGAATTCCTCGCTGGAAAGGG
CTTCAAGGGCGGCAACCCACGGTAAGTAGCCCTTCACCGGGCAGAGCCCA
AGAAGGCTGACAATTTTCCGGCTCAGCTCCTTGACCTGGGACGGTTATTT
TACCGCCGAAGGGGACTGGACTTTGGCCATTTATGGCTGGACCACGAACC
CCGTCACCGAGTGGTATATTGTGGAGACGCATGGAACTGGAACCCCAGGC
AACGGGGACATCCTCGGCCAGGTTGATAGTGATGGCGGCGTCTACGATGT
CTATAATCTTCCCTATAGGAATGTTCCGGAGATCTACGGTGTCACCAACT
TCGACCAGTACTGGTCGGTGCGTCGCACCCACCGCACCACCGGCACCGTC
GACGTGAGCGCCCATTTCCAGGGCTGGAAAAACTTGGGTCTCAACCCTGG
CTCCCCAGTCTTTCAGATGGTTACTCTGGAAGGATTTTCCGGCCAGGGGT
ACCTGGACTTCACCGTTAGTGCACAGGGAAAAAAAGGGACATTGTGA back to topCoding sequence (CDS) from alignment at ch3:4080355..4081201- >KJC3_004154-T1 ID=KJC3_004154-T1|Name=KJC3_004154-T1|organism=Aspergillus niger KJC3|type=CDS|length=1584bp|location=Sequence derived from alignment at ch3:4080355..4081201- (Aspergillus niger KJC3)
CTCCTTGACCTGGGACGGTTATTTTACCGCCGAAGGGGACTGGACTTTGG
CCATTTATGGCTGGACCACGAACCCCGTCACCGAGTGGTATATTGTGGAG
ACGCATGGAACTGGAACCCCAGGCAACGGGGACATCCTCGGCCAGGTTGA
TAGTGATGGCGGCGTCTACGATGTCTATAATCTTCCCTATAGGAATGTTC
CGGAGATCTACGGTGTCACCAACTTCGACCAGTACTGGTCGGTGCGTCGC
ACCCACCGCACCACCGGCACCGTCGACGTGAGCGCCCATTTCCAGGGCTG
GAAAAACTTGGGTCTCAACCCTGGCTCCCCAGTCTTTCAGATGGTTACTC
TGGAAGGATTTTCCGGCCAGGGGTACCTGGACTTCACCGTTAGTGCACAG
GGAAAAAAAGGGACATTGTGAATGGTGTCTTTCCTTGGCCAAGCACGCCT
AGCCGTGCCAATCCTGTCAGCTTTTGCGTGCATGCTTGCGGCAAGTTCCG
CGATCCCCCCACCACCGCGTGGAGCTCTTTCACCCGAACGTCTGCAATGG
ATTAGAGAGGTGATCGGCAATCAGACTGAGAACGACAGCGTTTCGGACCT
TGCTAAGCGGAGCACTGTCCTGTCTACCAGCCAAGACGGAGTTGACAGCG
CCGGATTCTACTACTCAGTGTACAATGACAACGGGGCCGATGTCGGATAC
ACCGAATACCCCACGACCGGCCAGTTCGAACTTGGCTGGAGTGCTGAGGC
GGAATTCCTCGCTGGAAAGGGCTTCAAGGGCGGCAACCCACGCTCCTTGA
CCTGGGACGGTTATTTTACCGCCGAAGGGGACTGGACTTTGGCCATTTAT
GGCTGGACCACGAACCCCGTCACCGAGTGGTATATTGTGGAGACGCATGG
AACTGGAACCCCAGGCAACGGGGACATCCTCGGCCAGGTTGATAGTGATG
GCGGCGTCTACGATGTCTATAATCTTCCCTATAGGAATGTTCCGGAGATC
TACGGTGTCACCAACTTCGACCAGTACTGGTCGGTGCGTCGCACCCACCG
CACCACCGGCACCGTCGACGTGAGCGCCCATTTCCAGGGCTGGAAAAACT
TGGGTCTCAACCCTGGCTCCCCAGTCTTTCAGATGGTTACTCTGGAAGGA
TTTTCCGGCCAGGGGTACCTGGACTTCACCGTTAGTGCACAGGGAAAAAA
AGGGACATTGTGAATGGTGTCTTTCCTTGGCCAAGCACGCCTAGCCGTGC
CAATCCTGTCAGCTTTTGCGTGCATGCTTGCGGCAAGTTCCGCGATCCCC
CCACCACCGCGTGGAGCTCTTTCACCCGAACGTCTGCAATGGATTAGAGA
GGTGATCGGCAATCAGACTGAGAACGACAGCGTTTCGGACCTTGCTAAGC
GGAGCACTGTCCTGTCTACCAGCCAAGACGGAGTTGACAGCGCCGGATTC
TACTACTCAGTGTACAATGACAACGGGGCCGATGTCGGATACACCGAATA
CCCCACGACCGGCCAGTTCGAACTTGGCTGGAGTGCTGAGGCGGAATTCC
TCGCTGGAAAGGGCTTCAAGGGCGGCAACCCACG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0005975 | carbohydrate metabolic process |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| Note | SECRETED:SignalP(1-27) |
| Note | CAZy:GH11 |
| DBxref | InterPro:IPR013320 |
| DBxref | InterPro:IPR013319 |
| DBxref | InterPro:IPR033123 |
| DBxref | InterPro:IPR001137 |
| DBxref | PFAM:PF00457 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch3 | supercontig | ch3:4080355..4081201 - |
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