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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch3:4099267..4101101+ Legend: five_prime_UTRexonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_004161-T1 ID=KJC3_004161-T1|Name=KJC3_004161-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1835bp|location=Sequence derived from alignment at ch3:4099267..4101101+ (Aspergillus niger KJC3)
TGCTCTGAAGAATCCGCCTGGACAGAATGGGTGCAGACCGTATTGCAGTG
GCCAATGATGGCATGACTCGTGAGAGAAACATCGAGGCTCAGAGTGCCTT
CGCTTCTACTTTGGTGGTGGATGTCGAGAAGGCGCCTCATTCTAAGGAAG
TGCCCACTGACAGACCGCATACCAATGTCTATGGCTCCACTATTAACACT
CCCACTTCTGTGGCTGGAAGCGATGCCGTCTATGCGGCTAAGGCGGCGCT
TCTGAACCAGGCGCTGATGGATATGGGTATGGGGTTGTATCAGTGGTTGC
TCTTTATTATTACCAGTGTGGGATGGTTTCTCGATAGTGTATGCCTCCAT
ATGAACAGTGCAAAAGTGAAGAAACATTTGCTGATCAGTACAGTTCTGGT
TGATGTCCTTCACGGTCATCGCCCCCTCCAGCGCCAATGAAGCCCAGTTC
TTCTTCACCGACAACAAAGAGGCCTACCTCTTCATTAGTCTGTACGTCGG
TCTGACCACGGGCTCCACCGCCTGGCCCTGGATGTCCGACATGCTGGGCC
GGAAGTGGATCTTCACGAGTACCCTGGTCCTTATGGGCATGGGTGGCCTC
GTCGGTGCTGGAATGCCGTCCTTCACCGGCCTTTGTGTCGTTGGCTTCGT
TGTCGGCTTTGCAGTGGCTGGCAATCAGATCGTGGATGCGATGATTCTGC
TCGAATCTGTTCCCGCATCTCACCAGTTCCTTGTCTCCATGCAGGGTGCC
ATGTGGGGACTGGGTCAGCTGGTAGCAGAAGCTGTCGGATGGTAAGTCTA
CCTACTGTCAAACACCATACCACGCAATCTAACAACCACAGGGCATTTAT
CGCCGAATACACTTGCGGCACCGGTCCCGACGAGATCAGCACCGGCGCAG
CCCTCTCCCACCAGTCCCGCGCCGACCACTCCAGCAGCAGCAGCAGCAGC
TCCCAATGCCATTACGTGTCCAACAAGGGCTGGCGCTACGTCTGGTGGAC
CTTCGGCTGTATGACACTGTTTCTGTACTTGTGCCGGTTTGCCTTCCCGC
TGCGCGAAACCCCCAAGTATCTGCTCTCCAAACGCCGCGACGCCGAAGCA
ACCCAGCTCGTCAAGGACATCGCCGCCTACAGCAACCGTAAGACCTGGCT
GGAGGAGTCCTCCTTTGCGCGCATTGACTCGACCGTTGATGCCAGCGCCC
CCGAGTCCCGTCGCCAGTCGCGCACCAAGTCCCTCCTGTCCTCTGCCGGA
GCCATCGGCCTCCCCGTTCTCTGTCTCCTCTGGGCCATCGCCGGGTTGAC
TTTCACCCTGCACAAAACCTACATCAGCAAGTACCTCGCCACTAAGGGTG
TCGAGGCGGTGTCAGCTACCTCCGTGACTACTGGATACCTCTACAGCCGG
TACCTGTACGTTGCGCTGTGCGCTATCCCCGGCCCGATCGTGGTGGGTCT
TCTCATCGAGGCGAAGGGACTGGGTCGCAAGCGCACGGGATCTATTGTCG
CTGTGCTGACCGGTTTGTTCATGTTTCTCGCGGCGGTGTCGCGGTCGAGG
GATGCGCTGCTTGCCTTCGAATGTATCCTGTCATTTTTGCAGACGGCGAC
GATGGCGGTGCTAGTTACGTACTCCGTCGAGGTGTTTGCGGCACCGTTCC
GGGGCTTCGGGCTGGGAGTCGTCGGATTCTGCTGGGGATTGTTTGGGTTG
ATTGCTAGTATTATTACGACGTTCGAGAGCACTGTTGCCGGTGGTGCGGC
GGTGTGGTTCTGTGGTGCTATTTGGGTGATCATGGGTGGTGCTTGGATGG
TTGTGCCTGAGACGAAGGGTCGGGCTGCTGCTTAG back to topCoding sequence (CDS) from alignment at ch3:4099267..4101101+ >KJC3_004161-T1 ID=KJC3_004161-T1|Name=KJC3_004161-T1|organism=Aspergillus niger KJC3|type=CDS|length=5112bp|location=Sequence derived from alignment at ch3:4099267..4101101+ (Aspergillus niger KJC3)
ATGGGTGCAGACCGTATTGCAGTGGCCAATGATGGCATGACTCGTGAGAG
AAACATCGAGGCTCAGAGTGCCTTCGCTTCTACTTTGGTGGTGGATGTCG
AGAAGGCGCCTCATTCTAAGGAAGTGCCCACTGACAGACCGCATACCAAT
GTCTATGGCTCCACTATTAACACTCCCACTTCTGTGGCTGGAAGCGATGC
CGTCTATGCGGCTAAGGCGGCGCTTCTGAACCAGGCGCTGATGGATATGG
GTATGGGGTTGTATCAGTGGTTGCTCTTTATTATTACCAGTGTGGGATGG
TTTCTCGATAGTTTCTGGTTGATGTCCTTCACGGTCATCGCCCCCTCCAG
CGCCAATGAAGCCCAGTTCTTCTTCACCGACAACAAAGAGGCCTACCTCT
TCATTAGTCTGTACGTCGGTCTGACCACGGGCTCCACCGCCTGGCCCTGG
ATGTCCGACATGCTGGGCCGGAAGTGGATCTTCACGAGTACCCTGGTCCT
TATGGGCATGGGTGGCCTCGTCGGTGCTGGAATGCCGTCCTTCACCGGCC
TTTGTGTCGTTGGCTTCGTTGTCGGCTTTGCAGTGGCTGGCAATCAGATC
GTGGATGCGATGATTCTGCTCGAATCTGTTCCCGCATCTCACCAGTTCCT
TGTCTCCATGCAGGGTGCCATGTGGGGACTGGGTCAGCTGGTAGCAGAAG
CTGTCGGATGGGCATTTATCGCCGAATACACTTGCGGCACCGGTCCCGAC
GAGATCAGCACCGGCGCAGCCCTCTCCCACCAGTCCCGCGCCGACCACTC
CAGCAGCAGCAGCAGCAGCTCCCAATGCCATTACGTGTCCAACAAGGGCT
GGCGCTACGTCTGGTGGACCTTCGGCTGTATGACACTGTTTCTGTACTTG
TGCCGGTTTGCCTTCCCGCTGCGCGAAACCCCCAAGTATCTGCTCTCCAA
ACGCCGCGACGCCGAAGCAACCCAGCTCGTCAAGGACATCGCCGCCTACA
GCAACCGTAAGACCTGGCTGGAGGAGTCCTCCTTTGCGCGCATTGACTCG
ACCGTTGATGCCAGCGCCCCCGAGTCCCGTCGCCAGTCGCGCACCAAGTC
CCTCCTGTCCTCTGCCGGAGCCATCGGCCTCCCCGTTCTCTGTCTCCTCT
GGGCCATCGCCGGGTTGACTTTCACCCTGCACAAAACCTACATCAGCAAG
TACCTCGCCACTAAGGGTGTCGAGGCGGTGTCAGCTACCTCCGTGACTAC
TGGATACCTCTACAGCCGGTACCTGTACGTTGCGCTGTGCGCTATCCCCG
GCCCGATCGTGGTGGGTCTTCTCATCGAGGCGAAGGGACTGGGTCGCAAG
CGCACGGGATCTATTGTCGCTGTGCTGACCGGTTTGTTCATGTTTCTCGC
GGCGGTGTCGCGGTCGAGGGATGCGCTGCTTGCCTTCGAATGTATCCTGT
CATTTTTGCAGACGGCGACGATGGCGGTGCTAGTTACGTACTCCGTCGAG
GTGTTTGCGGCACCGTTCCGGGGCTTCGGGCTGGGAGTCGTCGGATTCTG
CTGGGGATTGTTTGGGTTGATTGCTAGTATTATTACGACGTTCGAGAGCA
CTGTTGCCGGTGGTGCGGCGGTGTGGTTCTGTGGTGCTATTTGGGTGATC
ATGGGTGGTGCTTGGATGGTTGTGCCTGAGACGAAGGGTCGGGCTGCTGC
TTAGATGGGTGCAGACCGTATTGCAGTGGCCAATGATGGCATGACTCGTG
AGAGAAACATCGAGGCTCAGAGTGCCTTCGCTTCTACTTTGGTGGTGGAT
GTCGAGAAGGCGCCTCATTCTAAGGAAGTGCCCACTGACAGACCGCATAC
CAATGTCTATGGCTCCACTATTAACACTCCCACTTCTGTGGCTGGAAGCG
ATGCCGTCTATGCGGCTAAGGCGGCGCTTCTGAACCAGGCGCTGATGGAT
ATGGGTATGGGGTTGTATCAGTGGTTGCTCTTTATTATTACCAGTGTGGG
ATGGTTTCTCGATAGTTTCTGGTTGATGTCCTTCACGGTCATCGCCCCCT
CCAGCGCCAATGAAGCCCAGTTCTTCTTCACCGACAACAAAGAGGCCTAC
CTCTTCATTAGTCTGTACGTCGGTCTGACCACGGGCTCCACCGCCTGGCC
CTGGATGTCCGACATGCTGGGCCGGAAGTGGATCTTCACGAGTACCCTGG
TCCTTATGGGCATGGGTGGCCTCGTCGGTGCTGGAATGCCGTCCTTCACC
GGCCTTTGTGTCGTTGGCTTCGTTGTCGGCTTTGCAGTGGCTGGCAATCA
GATCGTGGATGCGATGATTCTGCTCGAATCTGTTCCCGCATCTCACCAGT
TCCTTGTCTCCATGCAGGGTGCCATGTGGGGACTGGGTCAGCTGGTAGCA
GAAGCTGTCGGATGGGCATTTATCGCCGAATACACTTGCGGCACCGGTCC
CGACGAGATCAGCACCGGCGCAGCCCTCTCCCACCAGTCCCGCGCCGACC
ACTCCAGCAGCAGCAGCAGCAGCTCCCAATGCCATTACGTGTCCAACAAG
GGCTGGCGCTACGTCTGGTGGACCTTCGGCTGTATGACACTGTTTCTGTA
CTTGTGCCGGTTTGCCTTCCCGCTGCGCGAAACCCCCAAGTATCTGCTCT
CCAAACGCCGCGACGCCGAAGCAACCCAGCTCGTCAAGGACATCGCCGCC
TACAGCAACCGTAAGACCTGGCTGGAGGAGTCCTCCTTTGCGCGCATTGA
CTCGACCGTTGATGCCAGCGCCCCCGAGTCCCGTCGCCAGTCGCGCACCA
AGTCCCTCCTGTCCTCTGCCGGAGCCATCGGCCTCCCCGTTCTCTGTCTC
CTCTGGGCCATCGCCGGGTTGACTTTCACCCTGCACAAAACCTACATCAG
CAAGTACCTCGCCACTAAGGGTGTCGAGGCGGTGTCAGCTACCTCCGTGA
CTACTGGATACCTCTACAGCCGGTACCTGTACGTTGCGCTGTGCGCTATC
CCCGGCCCGATCGTGGTGGGTCTTCTCATCGAGGCGAAGGGACTGGGTCG
CAAGCGCACGGGATCTATTGTCGCTGTGCTGACCGGTTTGTTCATGTTTC
TCGCGGCGGTGTCGCGGTCGAGGGATGCGCTGCTTGCCTTCGAATGTATC
CTGTCATTTTTGCAGACGGCGACGATGGCGGTGCTAGTTACGTACTCCGT
CGAGGTGTTTGCGGCACCGTTCCGGGGCTTCGGGCTGGGAGTCGTCGGAT
TCTGCTGGGGATTGTTTGGGTTGATTGCTAGTATTATTACGACGTTCGAG
AGCACTGTTGCCGGTGGTGCGGCGGTGTGGTTCTGTGGTGCTATTTGGGT
GATCATGGGTGGTGCTTGGATGGTTGTGCCTGAGACGAAGGGTCGGGCTG
CTGCTTAGATGGGTGCAGACCGTATTGCAGTGGCCAATGATGGCATGACT
CGTGAGAGAAACATCGAGGCTCAGAGTGCCTTCGCTTCTACTTTGGTGGT
GGATGTCGAGAAGGCGCCTCATTCTAAGGAAGTGCCCACTGACAGACCGC
ATACCAATGTCTATGGCTCCACTATTAACACTCCCACTTCTGTGGCTGGA
AGCGATGCCGTCTATGCGGCTAAGGCGGCGCTTCTGAACCAGGCGCTGAT
GGATATGGGTATGGGGTTGTATCAGTGGTTGCTCTTTATTATTACCAGTG
TGGGATGGTTTCTCGATAGTTTCTGGTTGATGTCCTTCACGGTCATCGCC
CCCTCCAGCGCCAATGAAGCCCAGTTCTTCTTCACCGACAACAAAGAGGC
CTACCTCTTCATTAGTCTGTACGTCGGTCTGACCACGGGCTCCACCGCCT
GGCCCTGGATGTCCGACATGCTGGGCCGGAAGTGGATCTTCACGAGTACC
CTGGTCCTTATGGGCATGGGTGGCCTCGTCGGTGCTGGAATGCCGTCCTT
CACCGGCCTTTGTGTCGTTGGCTTCGTTGTCGGCTTTGCAGTGGCTGGCA
ATCAGATCGTGGATGCGATGATTCTGCTCGAATCTGTTCCCGCATCTCAC
CAGTTCCTTGTCTCCATGCAGGGTGCCATGTGGGGACTGGGTCAGCTGGT
AGCAGAAGCTGTCGGATGGGCATTTATCGCCGAATACACTTGCGGCACCG
GTCCCGACGAGATCAGCACCGGCGCAGCCCTCTCCCACCAGTCCCGCGCC
GACCACTCCAGCAGCAGCAGCAGCAGCTCCCAATGCCATTACGTGTCCAA
CAAGGGCTGGCGCTACGTCTGGTGGACCTTCGGCTGTATGACACTGTTTC
TGTACTTGTGCCGGTTTGCCTTCCCGCTGCGCGAAACCCCCAAGTATCTG
CTCTCCAAACGCCGCGACGCCGAAGCAACCCAGCTCGTCAAGGACATCGC
CGCCTACAGCAACCGTAAGACCTGGCTGGAGGAGTCCTCCTTTGCGCGCA
TTGACTCGACCGTTGATGCCAGCGCCCCCGAGTCCCGTCGCCAGTCGCGC
ACCAAGTCCCTCCTGTCCTCTGCCGGAGCCATCGGCCTCCCCGTTCTCTG
TCTCCTCTGGGCCATCGCCGGGTTGACTTTCACCCTGCACAAAACCTACA
TCAGCAAGTACCTCGCCACTAAGGGTGTCGAGGCGGTGTCAGCTACCTCC
GTGACTACTGGATACCTCTACAGCCGGTACCTGTACGTTGCGCTGTGCGC
TATCCCCGGCCCGATCGTGGTGGGTCTTCTCATCGAGGCGAAGGGACTGG
GTCGCAAGCGCACGGGATCTATTGTCGCTGTGCTGACCGGTTTGTTCATG
TTTCTCGCGGCGGTGTCGCGGTCGAGGGATGCGCTGCTTGCCTTCGAATG
TATCCTGTCATTTTTGCAGACGGCGACGATGGCGGTGCTAGTTACGTACT
CCGTCGAGGTGTTTGCGGCACCGTTCCGGGGCTTCGGGCTGGGAGTCGTC
GGATTCTGCTGGGGATTGTTTGGGTTGATTGCTAGTATTATTACGACGTT
CGAGAGCACTGTTGCCGGTGGTGCGGCGGTGTGGTTCTGTGGTGCTATTT
GGGTGATCATGGGTGGTGCTTGGATGGTTGTGCCTGAGACGAAGGGTCGG
GCTGCTGCTTAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0016021 | integral component of membrane |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0055085 | transmembrane transport |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0022857 | transmembrane transporter activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_004161-T1.utr5p1 | KJC3_004161-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR036259 |
| DBxref | InterPro:IPR020846 |
| DBxref | InterPro:IPR005828 |
| DBxref | PFAM:PF00083 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch3 | supercontig | ch3:4099267..4101101 + |
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