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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch3:4106292..4107387- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_004166-T1 ID=KJC3_004166-T1|Name=KJC3_004166-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1096bp|location=Sequence derived from alignment at ch3:4106292..4107387- (Aspergillus niger KJC3)
ATGAACGTATCCGGGAGCGCTCCCTTCGGGAACGACTATATCCCGCACCC
TCATCTTCACCCTCACCCGCGGCTTCACACGGCCGACATCGGGATCTTCA
AATCGACCATCCTTCCCTCCTTCACTCTCCACACGACTCTCGACATCGCT
GCTTTTATTGCATCCAAGGCCACTGACCGCGCCGAAATCAAAGACTGGTG
CTGGCCTTCTAGCCAAGTGATCAACGCCTGGTGGAGCGCCATTGGTCACC
AAGTCTACTACCACAACATCTCCCCGCAAACTGCCTGGTCGACTCTCTCT
TGGACTGAAAAGGTACTCTTGACTTGTGTTACGGTCTGGGGTACTCGGCT
GTTTACTCGCATCGCTTCACGGACTATCACCCGCGGCAAGGATGACCCGC
GCTACGACCAGCTGAAGAAGGAAGACCCCAATGGATTCTGGACCTCGGCT
CTCTTGAAGCAGTATCTCCCTGAGGCGGCTTTCCTCACCCTGATCGCCCT
GCCCTTTACCGTGCCGTTCCGGTTGACTTCGTCGACATTGTCGCTGGACG
GTGATGTCCAGTCTGCCGTGCGCGCAATCGGTGTCGCGCTCTTTGGTGCT
GGATTCGCATTGGAAGTCACGGCCGATGCGCAGCTGGAGTTGCACCGTCA
GGAACGGACCGATCTGTGCAAGCACGGCGTGTGGAGTATCGTCCGACACC
CTAAGTAAGCTGCCCCTTCGCATCCTCACTTTCATACTACTGTGGGGGAT
CTGGACTAACGAAATTAGCTACCTCGGCGACACCCTCGTGCACATCTCCT
TCGCCGTCCTCAACGTCGCCAACAACTTCAACCCGATCGTCCTTCTCGGT
CCCCTAACCAACTACTTCTTCCTCCGCTTCGTCGGCGGCGACCGCCAGAC
CGAAGCCAGCCAGGAGACGCGGTACCGCACCGAGGACCTGCACAAGTACG
AGCAGTTGCAAAGCTGGCGGCGCGAGAAGAACAGCTTCTGGCCCGGTTTC
ACGGAGGTAGTGAACCCCTGGACCTGGGTGGTGCTTGGCGCGGGTGTGCT
GGGTGTGGTCGTAGAGGAGGGTATTCGGGGATGGCTTACTCAATAA back to topCoding sequence (CDS) from alignment at ch3:4106292..4107387- >KJC3_004166-T1 ID=KJC3_004166-T1|Name=KJC3_004166-T1|organism=Aspergillus niger KJC3|type=CDS|length=2064bp|location=Sequence derived from alignment at ch3:4106292..4107387- (Aspergillus niger KJC3)
CTACCTCGGCGACACCCTCGTGCACATCTCCTTCGCCGTCCTCAACGTCG
CCAACAACTTCAACCCGATCGTCCTTCTCGGTCCCCTAACCAACTACTTC
TTCCTCCGCTTCGTCGGCGGCGACCGCCAGACCGAAGCCAGCCAGGAGAC
GCGGTACCGCACCGAGGACCTGCACAAGTACGAGCAGTTGCAAAGCTGGC
GGCGCGAGAAGAACAGCTTCTGGCCCGGTTTCACGGAGGTAGTGAACCCC
TGGACCTGGGTGGTGCTTGGCGCGGGTGTGCTGGGTGTGGTCGTAGAGGA
GGGTATTCGGGGATGGCTTACTCAATAAATGAACGTATCCGGGAGCGCTC
CCTTCGGGAACGACTATATCCCGCACCCTCATCTTCACCCTCACCCGCGG
CTTCACACGGCCGACATCGGGATCTTCAAATCGACCATCCTTCCCTCCTT
CACTCTCCACACGACTCTCGACATCGCTGCTTTTATTGCATCCAAGGCCA
CTGACCGCGCCGAAATCAAAGACTGGTGCTGGCCTTCTAGCCAAGTGATC
AACGCCTGGTGGAGCGCCATTGGTCACCAAGTCTACTACCACAACATCTC
CCCGCAAACTGCCTGGTCGACTCTCTCTTGGACTGAAAAGGTACTCTTGA
CTTGTGTTACGGTCTGGGGTACTCGGCTGTTTACTCGCATCGCTTCACGG
ACTATCACCCGCGGCAAGGATGACCCGCGCTACGACCAGCTGAAGAAGGA
AGACCCCAATGGATTCTGGACCTCGGCTCTCTTGAAGCAGTATCTCCCTG
AGGCGGCTTTCCTCACCCTGATCGCCCTGCCCTTTACCGTGCCGTTCCGG
TTGACTTCGTCGACATTGTCGCTGGACGGTGATGTCCAGTCTGCCGTGCG
CGCAATCGGTGTCGCGCTCTTTGGTGCTGGATTCGCATTGGAAGTCACGG
CCGATGCGCAGCTGGAGTTGCACCGTCAGGAACGGACCGATCTGTGCAAG
CACGGCGTGTGGAGTATCGTCCGACACCCTAACTACCTCGGCGACACCCT
CGTGCACATCTCCTTCGCCGTCCTCAACGTCGCCAACAACTTCAACCCGA
TCGTCCTTCTCGGTCCCCTAACCAACTACTTCTTCCTCCGCTTCGTCGGC
GGCGACCGCCAGACCGAAGCCAGCCAGGAGACGCGGTACCGCACCGAGGA
CCTGCACAAGTACGAGCAGTTGCAAAGCTGGCGGCGCGAGAAGAACAGCT
TCTGGCCCGGTTTCACGGAGGTAGTGAACCCCTGGACCTGGGTGGTGCTT
GGCGCGGGTGTGCTGGGTGTGGTCGTAGAGGAGGGTATTCGGGGATGGCT
TACTCAATAAATGAACGTATCCGGGAGCGCTCCCTTCGGGAACGACTATA
TCCCGCACCCTCATCTTCACCCTCACCCGCGGCTTCACACGGCCGACATC
GGGATCTTCAAATCGACCATCCTTCCCTCCTTCACTCTCCACACGACTCT
CGACATCGCTGCTTTTATTGCATCCAAGGCCACTGACCGCGCCGAAATCA
AAGACTGGTGCTGGCCTTCTAGCCAAGTGATCAACGCCTGGTGGAGCGCC
ATTGGTCACCAAGTCTACTACCACAACATCTCCCCGCAAACTGCCTGGTC
GACTCTCTCTTGGACTGAAAAGGTACTCTTGACTTGTGTTACGGTCTGGG
GTACTCGGCTGTTTACTCGCATCGCTTCACGGACTATCACCCGCGGCAAG
GATGACCCGCGCTACGACCAGCTGAAGAAGGAAGACCCCAATGGATTCTG
GACCTCGGCTCTCTTGAAGCAGTATCTCCCTGAGGCGGCTTTCCTCACCC
TGATCGCCCTGCCCTTTACCGTGCCGTTCCGGTTGACTTCGTCGACATTG
TCGCTGGACGGTGATGTCCAGTCTGCCGTGCGCGCAATCGGTGTCGCGCT
CTTTGGTGCTGGATTCGCATTGGAAGTCACGGCCGATGCGCAGCTGGAGT
TGCACCGTCAGGAACGGACCGATCTGTGCAAGCACGGCGTGTGGAGTATC
GTCCGACACCCTAA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR010721 |
| DBxref | PFAM:PF06966 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch3 | supercontig | ch3:4106292..4107387 - |
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