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KJC3_004173-T1, KJC3_004173-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_004173-T1
Unique NameKJC3_004173-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch3:4121656..4123916+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_004173-T1 ID=KJC3_004173-T1|Name=KJC3_004173-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2261bp|location=Sequence derived from alignment at ch3:4121656..4123916+ (Aspergillus niger KJC3)
CACACCGAAGCCGAAGCCGATTCCGTCTCAAGCATACCCACCAGCCATCT
ACCATCTATGTTTGCCAACACCGTTCCAAAATAACCATGTAGCTGTTCCC
ATTCGGGGCTCACAGTTACTCCGACCTATTCCATGCCCGCTCTCAGGCGG
AAGAATGGCCGAGAGCCAGCTTGTGAGGCATGCCGGCGACGCAAACTGGC
CTGCGACCACGAAACCCCCGCCTGCCAGCGGTGTCGGAGACTATCCTTGA
AATGCGTCTATCTTGCCAATCCACTCACCAAAGGCAGAGCGAGAAGCCTG
CCTGAGGCCGACTCGCCGACTGTCTTGAGCAATGAGAGCGAGGGTGTCCC
AAGTACCAAAACCTGCCCGGGAGCCCAGTCGACCACGCCCATCCTCGAAA
GCTCAGCCGAGTACCTGGGGCCCACGAGTTTTTCATCTGTATTTGTAGAA
CATCGGGATCGATTCGAAGTGGATCAGACCCTGAAAACGCCCACTGGAGG
GGGTATCGATGGTGTCGGGGCGCAATCACCCACCCAGCGGGGGAACCCTA
CCATCACGCCGAGAATGCTCCAACTGGGGATACAGATCCTACAAAACCTG
CCCGATGAACGAACATGTAACTTACTTTTCGTTCATCCGATGGCTTTGAT
GGATGCCTGTTTCCGACTAGCTTATCGAATCGCGTCTGATAAGATGTGGG
ATGAGTATCGCGACGTGCTCCGGCTGCGGAACAGCGAGCACCTACAGTTT
GTTGCGAAGCGGTTTTCAGAGTGCAGTCTAACGCCTTTACCGGCTGTACA
AGATCCACACCGCTGGATCGAGTCTTTCTCGGGAAAGAGAACTCGTTGGG
AGCTTCTAGGATCCTTGTTCACTTTTTGGTCGTCTGCAGCCTCACAGTTG
CCGGTACAGCACGATATTATCACCCAGTACTGTCAGCAACATGCGTTCAA
GAGACCCAAAGACCTTATGGTGCATCTGAAACGGTGTGCATCTATGTGCA
TTGAGCTGTGTAGTCAGCTGGGTGCAATTAATATTCTTTTTGTCAATTTG
GCGTTCAAACATAACATCCTCGAGAGCATTGCCAGTGGTGATAAGAGTAA
GTCCTAGTCCGGAGATAATCAAACATAGCACATAGAGCTGATCAACAGGC
CTTTCCTGCTGGCGCCAACATGGCGATGTAATTGCAGTGACGACATCAAT
CGGGCTTCACCGGGAATTATCATCTGATTGGAACGAGGTTTCATTCCAGC
ACGAACTCAAGCGACGAGTCTACGCATCGATTTACAATTTCGACAAGGTC
ATCTCCACCTTTACCGGCAGACCACCGCTCCTGAACAGAAAGTACTCGAC
GACCAAGCTGCCGCTGGACATTGACGACGAGGATATATTCTCCGGCAGAA
TTGGCGATGCCGTGGCAAAGCTCAACTCAAATGGTTGGGACAGCAGCGAA
GACCGACAGCCGTATCCTGCCACCATCTTACGGGCGCGAGCAATGCTAGC
AAGGAACCGCGAAGAGATGCTAGAAGTTTTAGAGACTTCGCAGGATAGCA
TCACAGATGCTGCAGTTCAAACATGCCTGTATGACTTCAGCCCAATCTGT
ATCCCTCGCACTTACAACTGCTGACAAGCGAACAGCCACCTCAAAGCACA
AGCTACAGACATCTACGCACAATTTCCCGAAGTCATCAAGTTCAAAACAG
AACACGTCCACGACCGCGACATTCCCGGCCAGCTGCTCGCTTTGCGTGTC
CTTGTGCGCTTGGATTTTCTGCTCAACCTGTTCATCTTAGAGCGACTACT
GACCCGACACAGGGTGGTTGACGAACAGGCGCTAATCCAGGTTAGCCATG
AAATGGTAGGATTAACCTTGATATACTGGAAGCACAAGGACCGGTTCGAG
AATCACGTTGATTTTTCCTGGCTGGTATGACTCACACTCCCCTTCAAACA
GATACACCTCATCAATACTGACTCGACATGCTCAGGCTATGTCCTACGCC
GTCCCAGGCAGCGGCATTCTCTGCCTTGAGCTGCTTCGCCAATCTAGCTC
TCCCGAAACGTACACCTTAGAACTTCCCCGATCGGACATCATCCAGGACC
TCAGTGTACTGGTCGCCTTTCTCGACTGGCTCCGCCCCTCGGAATCCGAC
ATCGCAGCCAAGGCGCAAATCAAGGGAATATTGCAACGATCATTGGACCG
AATCCTCAGCATGCCGGCATCGCTGCACAGTCCGACGAGAGCCCTGGACG
CGCTGCCCGAC
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Coding sequence (CDS) from alignment at ch3:4121656..4123916+

>KJC3_004173-T1 ID=KJC3_004173-T1|Name=KJC3_004173-T1|organism=Aspergillus niger KJC3|type=CDS|length=6084bp|location=Sequence derived from alignment at ch3:4121656..4123916+ (Aspergillus niger KJC3)
ATGCCCGCTCTCAGGCGGAAGAATGGCCGAGAGCCAGCTTGTGAGGCATG
CCGGCGACGCAAACTGGCCTGCGACCACGAAACCCCCGCCTGCCAGCGGT
GTCGGAGACTATCCTTGAAATGCGTCTATCTTGCCAATCCACTCACCAAA
GGCAGAGCGAGAAGCCTGCCTGAGGCCGACTCGCCGACTGTCTTGAGCAA
TGAGAGCGAGGGTGTCCCAAGTACCAAAACCTGCCCGGGAGCCCAGTCGA
CCACGCCCATCCTCGAAAGCTCAGCCGAGTACCTGGGGCCCACGAGTTTT
TCATCTGTATTTGTAGAACATCGGGATCGATTCGAAGTGGATCAGACCCT
GAAAACGCCCACTGGAGGGGGTATCGATGGTGTCGGGGCGCAATCACCCA
CCCAGCGGGGGAACCCTACCATCACGCCGAGAATGCTCCAACTGGGGATA
CAGATCCTACAAAACCTGCCCGATGAACGAACATGTAACTTACTTTTCGT
TCATCCGATGGCTTTGATGGATGCCTGTTTCCGACTAGCTTATCGAATCG
CGTCTGATAAGATGTGGGATGAGTATCGCGACGTGCTCCGGCTGCGGAAC
AGCGAGCACCTACAGTTTGTTGCGAAGCGGTTTTCAGAGTGCAGTCTAAC
GCCTTTACCGGCTGTACAAGATCCACACCGCTGGATCGAGTCTTTCTCGG
GAAAGAGAACTCGTTGGGAGCTTCTAGGATCCTTGTTCACTTTTTGGTCG
TCTGCAGCCTCACAGTTGCCGGTACAGCACGATATTATCACCCAGTACTG
TCAGCAACATGCGTTCAAGAGACCCAAAGACCTTATGGTGCATCTGAAAC
GGTGTGCATCTATGTGCATTGAGCTGTGTAGTCAGCTGGGTGCAATTAAT
ATTCTTTTTGTCAATTTGGCGTTCAAACATAACATCCTCGAGAGCATTGC
CAGTGGTGATAAGAGCCTTTCCTGCTGGCGCCAACATGGCGATGTAATTG
CAGTGACGACATCAATCGGGCTTCACCGGGAATTATCATCTGATTGGAAC
GAGGTTTCATTCCAGCACGAACTCAAGCGACGAGTCTACGCATCGATTTA
CAATTTCGACAAGGTCATCTCCACCTTTACCGGCAGACCACCGCTCCTGA
ACAGAAAGTACTCGACGACCAAGCTGCCGCTGGACATTGACGACGAGGAT
ATATTCTCCGGCAGAATTGGCGATGCCGTGGCAAAGCTCAACTCAAATGG
TTGGGACAGCAGCGAAGACCGACAGCCGTATCCTGCCACCATCTTACGGG
CGCGAGCAATGCTAGCAAGGAACCGCGAAGAGATGCTAGAAGTTTTAGAG
ACTTCGCAGGATAGCATCACAGATGCTGCAGTTCAAACATGCCTCCACCT
CAAAGCACAAGCTACAGACATCTACGCACAATTTCCCGAAGTCATCAAGT
TCAAAACAGAACACGTCCACGACCGCGACATTCCCGGCCAGCTGCTCGCT
TTGCGTGTCCTTGGTGGTTGAATGCCCGCTCTCAGGCGGAAGAATGGCCG
AGAGCCAGCTTGTGAGGCATGCCGGCGACGCAAACTGGCCTGCGACCACG
AAACCCCCGCCTGCCAGCGGTGTCGGAGACTATCCTTGAAATGCGTCTAT
CTTGCCAATCCACTCACCAAAGGCAGAGCGAGAAGCCTGCCTGAGGCCGA
CTCGCCGACTGTCTTGAGCAATGAGAGCGAGGGTGTCCCAAGTACCAAAA
CCTGCCCGGGAGCCCAGTCGACCACGCCCATCCTCGAAAGCTCAGCCGAG
TACCTGGGGCCCACGAGTTTTTCATCTGTATTTGTAGAACATCGGGATCG
ATTCGAAGTGGATCAGACCCTGAAAACGCCCACTGGAGGGGGTATCGATG
GTGTCGGGGCGCAATCACCCACCCAGCGGGGGAACCCTACCATCACGCCG
AGAATGCTCCAACTGGGGATACAGATCCTACAAAACCTGCCCGATGAACG
AACATGTAACTTACTTTTCGTTCATCCGATGGCTTTGATGGATGCCTGTT
TCCGACTAGCTTATCGAATCGCGTCTGATAAGATGTGGGATGAGTATCGC
GACGTGCTCCGGCTGCGGAACAGCGAGCACCTACAGTTTGTTGCGAAGCG
GTTTTCAGAGTGCAGTCTAACGCCTTTACCGGCTGTACAAGATCCACACC
GCTGGATCGAGTCTTTCTCGGGAAAGAGAACTCGTTGGGAGCTTCTAGGA
TCCTTGTTCACTTTTTGGTCGTCTGCAGCCTCACAGTTGCCGGTACAGCA
CGATATTATCACCCAGTACTGTCAGCAACATGCGTTCAAGAGACCCAAAG
ACCTTATGGTGCATCTGAAACGGTGTGCATCTATGTGCATTGAGCTGTGT
AGTCAGCTGGGTGCAATTAATATTCTTTTTGTCAATTTGGCGTTCAAACA
TAACATCCTCGAGAGCATTGCCAGTGGTGATAAGAGCCTTTCCTGCTGGC
GCCAACATGGCGATGTAATTGCAGTGACGACATCAATCGGGCTTCACCGG
GAATTATCATCTGATTGGAACGAGGTTTCATTCCAGCACGAACTCAAGCG
ACGAGTCTACGCATCGATTTACAATTTCGACAAGGTCATCTCCACCTTTA
CCGGCAGACCACCGCTCCTGAACAGAAAGTACTCGACGACCAAGCTGCCG
CTGGACATTGACGACGAGGATATATTCTCCGGCAGAATTGGCGATGCCGT
GGCAAAGCTCAACTCAAATGGTTGGGACAGCAGCGAAGACCGACAGCCGT
ATCCTGCCACCATCTTACGGGCGCGAGCAATGCTAGCAAGGAACCGCGAA
GAGATGCTAGAAGTTTTAGAGACTTCGCAGGATAGCATCACAGATGCTGC
AGTTCAAACATGCCTCCACCTCAAAGCACAAGCTACAGACATCTACGCAC
AATTTCCCGAAGTCATCAAGTTCAAAACAGAACACGTCCACGACCGCGAC
ATTCCCGGCCAGCTGCTCGCTTTGCGTGTCCTTGGTGGTTGAATGCCCGC
TCTCAGGCGGAAGAATGGCCGAGAGCCAGCTTGTGAGGCATGCCGGCGAC
GCAAACTGGCCTGCGACCACGAAACCCCCGCCTGCCAGCGGTGTCGGAGA
CTATCCTTGAAATGCGTCTATCTTGCCAATCCACTCACCAAAGGCAGAGC
GAGAAGCCTGCCTGAGGCCGACTCGCCGACTGTCTTGAGCAATGAGAGCG
AGGGTGTCCCAAGTACCAAAACCTGCCCGGGAGCCCAGTCGACCACGCCC
ATCCTCGAAAGCTCAGCCGAGTACCTGGGGCCCACGAGTTTTTCATCTGT
ATTTGTAGAACATCGGGATCGATTCGAAGTGGATCAGACCCTGAAAACGC
CCACTGGAGGGGGTATCGATGGTGTCGGGGCGCAATCACCCACCCAGCGG
GGGAACCCTACCATCACGCCGAGAATGCTCCAACTGGGGATACAGATCCT
ACAAAACCTGCCCGATGAACGAACATGTAACTTACTTTTCGTTCATCCGA
TGGCTTTGATGGATGCCTGTTTCCGACTAGCTTATCGAATCGCGTCTGAT
AAGATGTGGGATGAGTATCGCGACGTGCTCCGGCTGCGGAACAGCGAGCA
CCTACAGTTTGTTGCGAAGCGGTTTTCAGAGTGCAGTCTAACGCCTTTAC
CGGCTGTACAAGATCCACACCGCTGGATCGAGTCTTTCTCGGGAAAGAGA
ACTCGTTGGGAGCTTCTAGGATCCTTGTTCACTTTTTGGTCGTCTGCAGC
CTCACAGTTGCCGGTACAGCACGATATTATCACCCAGTACTGTCAGCAAC
ATGCGTTCAAGAGACCCAAAGACCTTATGGTGCATCTGAAACGGTGTGCA
TCTATGTGCATTGAGCTGTGTAGTCAGCTGGGTGCAATTAATATTCTTTT
TGTCAATTTGGCGTTCAAACATAACATCCTCGAGAGCATTGCCAGTGGTG
ATAAGAGCCTTTCCTGCTGGCGCCAACATGGCGATGTAATTGCAGTGACG
ACATCAATCGGGCTTCACCGGGAATTATCATCTGATTGGAACGAGGTTTC
ATTCCAGCACGAACTCAAGCGACGAGTCTACGCATCGATTTACAATTTCG
ACAAGGTCATCTCCACCTTTACCGGCAGACCACCGCTCCTGAACAGAAAG
TACTCGACGACCAAGCTGCCGCTGGACATTGACGACGAGGATATATTCTC
CGGCAGAATTGGCGATGCCGTGGCAAAGCTCAACTCAAATGGTTGGGACA
GCAGCGAAGACCGACAGCCGTATCCTGCCACCATCTTACGGGCGCGAGCA
ATGCTAGCAAGGAACCGCGAAGAGATGCTAGAAGTTTTAGAGACTTCGCA
GGATAGCATCACAGATGCTGCAGTTCAAACATGCCTCCACCTCAAAGCAC
AAGCTACAGACATCTACGCACAATTTCCCGAAGTCATCAAGTTCAAAACA
GAACACGTCCACGACCGCGACATTCCCGGCCAGCTGCTCGCTTTGCGTGT
CCTTGGTGGTTGAATGCCCGCTCTCAGGCGGAAGAATGGCCGAGAGCCAG
CTTGTGAGGCATGCCGGCGACGCAAACTGGCCTGCGACCACGAAACCCCC
GCCTGCCAGCGGTGTCGGAGACTATCCTTGAAATGCGTCTATCTTGCCAA
TCCACTCACCAAAGGCAGAGCGAGAAGCCTGCCTGAGGCCGACTCGCCGA
CTGTCTTGAGCAATGAGAGCGAGGGTGTCCCAAGTACCAAAACCTGCCCG
GGAGCCCAGTCGACCACGCCCATCCTCGAAAGCTCAGCCGAGTACCTGGG
GCCCACGAGTTTTTCATCTGTATTTGTAGAACATCGGGATCGATTCGAAG
TGGATCAGACCCTGAAAACGCCCACTGGAGGGGGTATCGATGGTGTCGGG
GCGCAATCACCCACCCAGCGGGGGAACCCTACCATCACGCCGAGAATGCT
CCAACTGGGGATACAGATCCTACAAAACCTGCCCGATGAACGAACATGTA
ACTTACTTTTCGTTCATCCGATGGCTTTGATGGATGCCTGTTTCCGACTA
GCTTATCGAATCGCGTCTGATAAGATGTGGGATGAGTATCGCGACGTGCT
CCGGCTGCGGAACAGCGAGCACCTACAGTTTGTTGCGAAGCGGTTTTCAG
AGTGCAGTCTAACGCCTTTACCGGCTGTACAAGATCCACACCGCTGGATC
GAGTCTTTCTCGGGAAAGAGAACTCGTTGGGAGCTTCTAGGATCCTTGTT
CACTTTTTGGTCGTCTGCAGCCTCACAGTTGCCGGTACAGCACGATATTA
TCACCCAGTACTGTCAGCAACATGCGTTCAAGAGACCCAAAGACCTTATG
GTGCATCTGAAACGGTGTGCATCTATGTGCATTGAGCTGTGTAGTCAGCT
GGGTGCAATTAATATTCTTTTTGTCAATTTGGCGTTCAAACATAACATCC
TCGAGAGCATTGCCAGTGGTGATAAGAGCCTTTCCTGCTGGCGCCAACAT
GGCGATGTAATTGCAGTGACGACATCAATCGGGCTTCACCGGGAATTATC
ATCTGATTGGAACGAGGTTTCATTCCAGCACGAACTCAAGCGACGAGTCT
ACGCATCGATTTACAATTTCGACAAGGTCATCTCCACCTTTACCGGCAGA
CCACCGCTCCTGAACAGAAAGTACTCGACGACCAAGCTGCCGCTGGACAT
TGACGACGAGGATATATTCTCCGGCAGAATTGGCGATGCCGTGGCAAAGC
TCAACTCAAATGGTTGGGACAGCAGCGAAGACCGACAGCCGTATCCTGCC
ACCATCTTACGGGCGCGAGCAATGCTAGCAAGGAACCGCGAAGAGATGCT
AGAAGTTTTAGAGACTTCGCAGGATAGCATCACAGATGCTGCAGTTCAAA
CATGCCTCCACCTCAAAGCACAAGCTACAGACATCTACGCACAATTTCCC
GAAGTCATCAAGTTCAAAACAGAACACGTCCACGACCGCGACATTCCCGG
CCAGCTGCTCGCTTTGCGTGTCCTTGGTGGTTGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0042025host cell nucleus
GO:0005634nucleus
Vocabulary: Biological Process
TermDefinition
GO:0006355regulation of transcription, DNA-templated
GO:0006351transcription, DNA-templated
Vocabulary: Molecular Function
TermDefinition
GO:0000981DNA-binding transcription factor activity, RNA polymerase II-specific
GO:0008270zinc ion binding
GO:0003677DNA binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_004173KJC3_004173Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_004173-T1KJC3_004173-T1-proteinAspergillus niger KJC3polypeptide


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_004173-T1.utr5p1KJC3_004173-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_004173-T1.exon1KJC3_004173-T1.exon1Aspergillus niger KJC3exon
KJC3_004173-T1.exon2KJC3_004173-T1.exon2Aspergillus niger KJC3exon
KJC3_004173-T1.exon3KJC3_004173-T1.exon3Aspergillus niger KJC3exon
KJC3_004173-T1.exon4KJC3_004173-T1.exon4Aspergillus niger KJC3exon
KJC3_004173-T1.exon5KJC3_004173-T1.exon5Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_004173-T1.cdsKJC3_004173-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_004173-T1.utr3p1KJC3_004173-T1.utr3p1Aspergillus niger KJC3three_prime_UTR
KJC3_004173-T1.utr3p2KJC3_004173-T1.utr3p2Aspergillus niger KJC3three_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR036864
DBxrefInterPro:IPR001138
DBxrefInterPro:IPR007219
DBxrefPFAM:PF00172
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch3supercontigch3:4121656..4123916 +
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