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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch3:4146199..4148745- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_004182-T1 ID=KJC3_004182-T1|Name=KJC3_004182-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2547bp|location=Sequence derived from alignment at ch3:4146199..4148745- (Aspergillus niger KJC3)
GCCGGTGCCATAAATAGCATAATGCCCAGAAATTTTCGTGTAGTCTGGGG
CTTACTGACTATCTACTGTTCTTCACAGTTGCCAACTGGTGCGGGGGTGC
TTTGACAAACCTTCTTGTCCCTTTTAGCCAGCATCCCGACCGGGTTTGCA
GAGTTTGCTTTCACTCTGACGAAAGCCTAGACACAGAATATGTCTCTAAG
GCCCCCTTATCTGCACTCATATTCTTCGGAAATGGTCGGAAATCGCTATA
TTAATGGACCGCTTAGTCGCATAGAATTCCGGAACGCTGGATCTGTCTGA
GTAACCATCAGCAGAAATCTCCTCCAGCATACGAGAAGATGGTAAGGGGA
GCCAAACACGTGAGTAATCGAAACCCAAAAAGAGCCCTGCGAGTCGACGA
ATGAAGATTAAACCATTGGTTAAGCTCCACTAAATCGGTGGACCCAGAGA
GGCTTAGCCAGGAAAAAGCATCTTTAGCTTCTTGATAGGATCTTTCTGCC
TGGCCGGACTCCGATCCATGCCTGGCCGACCCGAAAATCAACGAAACTCA
GGGGACCTATCAAGGGGTTCAGCCCTACTAGGCCCATTGTCCACCCACTT
GGCTGACAAGTCAGTAGCAAGCTTCTTTGTTTTTGGCAGTGATCTTGTGT
CCCCCTTATTCTCCGGCCCCCATTTAGCTGCGCCCGGCTTGATCCTGAAC
TGGGATCCACGTATGCACCGGGGCCAAAAGTTCCTTCTAGTCGCTAAGGT
GTTAATCTAAATACCACTTAAAAACATGTCATCGCCCCCGGTCATGACGC
GAGGCCCATCAGGTTCCGGCCTTGCATGTTTGCCCGCTGCCAACGTCATC
CGTGCAGGCAGAAGCAATCCTCTGCACGGGACTTGCTCGCCCTATTCTCA
CGGACTACCTATGCTTGCTCAACCAAATTCTTTGTTGCACAATGACTTGG
GATGAGTCCAGGAAGCTCTTCTCGCACAATATGAGCCAGTTCGCGGCGAT
CCGGAGCCACCGCGGCTTCCGGATCATCTTCGCTGCCGTCGCAGTCATAT
TTGCGCTCTCTATATTCATGCTGCTTCCACCCGCATCGTCAACGAGTCAA
GTCTTCGGATTCGGGCAGGGACAGAAGCCGGCAACTCATTCATCTTCAGC
TGGAACCATCACAATAGATACCACCCTCATCACCGATATATCGCAATACT
TTGCGGACCACCCTATTCAGAAACCCTTTAAAGAGAAGTTCGGCGAGCTA
GGCCGCCGCAACCGAGTTCTTCGCGACTGGCTCATTCAAGCTGAAGCCTC
ACAGGACTCTACCACCAAGTCCATCTTACACAACGCCATTGAAGGAGTCG
CCATCGCACAATACCCTTTCCTGCAACCTCCCAAGCAGCCTCAGTCGCAC
CATTCTAGATCCTCCCATCACCCAGTACAAGACCTTCGCGCTTCTTTTGA
GCCCAACTCAGCCGGCATCGTCATCCCCACCAGCGACTACACCCTCCGTT
ATGCCGCCCACCTCATTGCCTCTCTCCGCTTCGTCCTCAACTCTACTCTG
CCCATCCAAGTCGTCTACGCAGGCGATGACGACCTCTCCCCGACCAACCG
GAACCACCTTTCAACACTGGCAGCCTCTGGCCCCGCCATCACCTTCCTCA
ACATCCTCACCGTCTTCGACGACACAACCCTCAAACTCCAAACGGGCGGC
TGGGCCATAAAACCTTTCGCGGCGCTAGCTTCCCCTTTCGAAAAAGTTAT
CCTTGCAGATGCTGACGCCGTCTTCCTGCAACCCCCAGAAGTACTCCTCC
AGCACGACGCCCTCGTCAACAAAGGCGCGCTTCTCTTCCATGACCGCCTT
CTCTGGAAACACGCCTTCGAGGGCCGTCATGAGTGGTGGCGGGATCAGAT
CCGTCGACCCAGTAAGGAAATGGATGCCTCTCTTGTCTGGACGGAAGATT
ACGCTGAAGAAGCGGACTCGGGTCTCGTGGTACTCGACAAAAGTAGGCCT
GATACGTTCATGGGCCTGTTGCATATCTGCTGGCAGAATACGTACGAAGT
GCGCGAGGAAACTACGTACAAGATCACGTATGGAGATAAGGAGAGCTGGT
GGTTCGGGTTGGAGTTGTCGGGCGCTGAGTATGAGTTTTCGAAGCATTAT
GGAGGGATCGTGGGGTGGGAGAACGTCGATGATAAGGAAAGAGTCGGTGT
ATGTAGTTTCGTGATTGCGCATGTGGATGCCAAGGGGCGACTGTTGTGGT
ATAATGGGAGTCTGTTGAAGAATAAGGGACAGGCTGGGATGGAGGATGTC
TATGAGGTCCCGGATAAGTGGATGATCGATGCGGAGTGGGTAAAAGGGTC
GAGGAAACAGGATCATAGTTGTATGGTCGGTGGTGAGGTCAGGGATCTCA
CGAAGGAGGAGTTGGATGTCTTAGAGAGGTCGATTGCTGCTGCAAGGCAG
GTGGATACGCTGGTGCGTACCGATTGAGCATTCATATAGATTCAAATTCA
CGTTGCTATAATATTTAGGAGTTTTCTGTTCGGCTACATACCCGCTG back to topCoding sequence (CDS) from alignment at ch3:4146199..4148745- >KJC3_004182-T1 ID=KJC3_004182-T1|Name=KJC3_004182-T1|organism=Aspergillus niger KJC3|type=CDS|length=1536bp|location=Sequence derived from alignment at ch3:4146199..4148745- (Aspergillus niger KJC3)
ATGACTTGGGATGAGTCCAGGAAGCTCTTCTCGCACAATATGAGCCAGTT
CGCGGCGATCCGGAGCCACCGCGGCTTCCGGATCATCTTCGCTGCCGTCG
CAGTCATATTTGCGCTCTCTATATTCATGCTGCTTCCACCCGCATCGTCA
ACGAGTCAAGTCTTCGGATTCGGGCAGGGACAGAAGCCGGCAACTCATTC
ATCTTCAGCTGGAACCATCACAATAGATACCACCCTCATCACCGATATAT
CGCAATACTTTGCGGACCACCCTATTCAGAAACCCTTTAAAGAGAAGTTC
GGCGAGCTAGGCCGCCGCAACCGAGTTCTTCGCGACTGGCTCATTCAAGC
TGAAGCCTCACAGGACTCTACCACCAAGTCCATCTTACACAACGCCATTG
AAGGAGTCGCCATCGCACAATACCCTTTCCTGCAACCTCCCAAGCAGCCT
CAGTCGCACCATTCTAGATCCTCCCATCACCCAGTACAAGACCTTCGCGC
TTCTTTTGAGCCCAACTCAGCCGGCATCGTCATCCCCACCAGCGACTACA
CCCTCCGTTATGCCGCCCACCTCATTGCCTCTCTCCGCTTCGTCCTCAAC
TCTACTCTGCCCATCCAAGTCGTCTACGCAGGCGATGACGACCTCTCCCC
GACCAACCGGAACCACCTTTCAACACTGGCAGCCTCTGGCCCCGCCATCA
CCTTCCTCAACATCCTCACCGTCTTCGACGACACAACCCTCAAACTCCAA
ACGGGCGGCTGGGCCATAAAACCTTTCGCGGCGCTAGCTTCCCCTTTCGA
AAAAGTTATCCTTGCAGATGCTGACGCCGTCTTCCTGCAACCCCCAGAAG
TACTCCTCCAGCACGACGCCCTCGTCAACAAAGGCGCGCTTCTCTTCCAT
GACCGCCTTCTCTGGAAACACGCCTTCGAGGGCCGTCATGAGTGGTGGCG
GGATCAGATCCGTCGACCCAGTAAGGAAATGGATGCCTCTCTTGTCTGGA
CGGAAGATTACGCTGAAGAAGCGGACTCGGGTCTCGTGGTACTCGACAAA
AGTAGGCCTGATACGTTCATGGGCCTGTTGCATATCTGCTGGCAGAATAC
GTACGAAGTGCGCGAGGAAACTACGTACAAGATCACGTATGGAGATAAGG
AGAGCTGGTGGTTCGGGTTGGAGTTGTCGGGCGCTGAGTATGAGTTTTCG
AAGCATTATGGAGGGATCGTGGGGTGGGAGAACGTCGATGATAAGGAAAG
AGTCGGTGTATGTAGTTTCGTGATTGCGCATGTGGATGCCAAGGGGCGAC
TGTTGTGGTATAATGGGAGTCTGTTGAAGAATAAGGGACAGGCTGGGATG
GAGGATGTCTATGAGGTCCCGGATAAGTGGATGATCGATGCGGAGTGGGT
AAAAGGGTCGAGGAAACAGGATCATAGTTGTATGGTCGGTGGTGAGGTCA
GGGATCTCACGAAGGAGGAGTTGGATGTCTTAGAGAGGTCGATTGCTGCT
GCAAGGCAGGTGGATACGCTGGTGCGTACCGATTGA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0016757 | transferase activity, transferring glycosyl groups |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006486 | protein glycosylation |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_004182-T1.utr3p1 | KJC3_004182-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| Note | CAZy:GT71 |
| DBxref | InterPro:IPR029044 |
| DBxref | InterPro:IPR022751 |
| DBxref | PFAM:PF11051 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch3 | supercontig | ch3:4146199..4148745 - |
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