You are here

Home

KJC3_004191-T1, KJC3_004191-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_004191-T1
Unique NameKJC3_004191-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch3:4170011..4171249-

Legend: CDSpolypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_004191-T1 ID=KJC3_004191-T1|Name=KJC3_004191-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1239bp|location=Sequence derived from alignment at ch3:4170011..4171249- (Aspergillus niger KJC3)
ATGAAGACTACCACCTACAGTTTGCTCGCTCTGGCAGCGGCTTCCAAGCT
GGCTTCCGCCCACACCACCGTCCAGGCCGTCTGGATCAACGGCGAGGACC
AGGGTCTCGGTAACTCCGCCGATGGCTACATCCGCAGTCCCCCCAGCAAC
AGCCCCGTCACCGACGTCACGTCCACCGACATGACCTGCAACGTCAACGG
TGACCAGGCCGCCTCTAAGACCCTCTCCGTCAAGGCCGGTGACGTTGTCA
CCTTCGAGTGGCACCACAGCGACCGCTCCGACTCCGACGACATCATCGCC
TCCTCCCACAAGGGTCCCGTCCAGGTCTACATGGCCCCGACGGCCAAGGG
CTCCAACGGCAACAACTGGGTCAAGATCGCCGAGGACGGATACCACAAGA
GCTCCGACGAGTGGGCCACCGACATCCTGATCGCCAACAAGGGCAAGCAC
AACATCACTGTTCCCGACGTTCCCGCCGGTAACTACCTCTTCCGCCCTGA
GATCATTGCCCTCCACGAGGGTAACCGCGAGGGTGGTGCCCAGTTCTACA
TGGAGTGTGTCCAGTTCAAGGTCACCTCCGACGGCTCCAGCGAGCTTCCC
TCCGGTGTCTCCATCCCCGGCGTCTACACCGCCACTGACCCCGGTATCCT
CTTCGATATCTACAACTCCTTCGACAGCTACCCCATCCCCGGCCCGGATG
TCTGGGATGGCTCCAGCTCCGGCTCCAGCTCCGGATCTTCCTCCGCTGCT
GCTGCTGCTACCACCTCCGCTGCTGTCGCTGCTACTACCCCCGCCACCCA
GGCTGCCGTCGAGGTCTCTTCCTCCGCTGCTGCTGTCGTTGAGTCCACCT
CTTCCGCCGCCGCTGCTACCACCGAAGCTGCCGCTCCCGTCGTCAGCTCT
GCTGCCCCCGTCCAGCAGGCCACCTCCGCTGTCACCAGCCAGGCCCAGGC
CCCCACCACCTTCGCCACCTCTTCTAAGTCCTCCAAGACTGCCTGCAAGA
ACAAGACCAAGTCCAAGTCCAAGGTTGCTGCTTCCAGCACTGAGGCCGTC
GTTGCCCCCGCCCCTACTTCCAGCGTCGTCCCTGCTGTCAGTGCCAGCGC
TAGCGCTTCCGCTGGCGGTGTTGCTAAGATGTACGAGCGCTGCGGTGGTA
TCAACCACACTGGCCCTACTACGTGCGAGAGCGGCTCCGTTTGCAAGAAG
TGGAACCCTTACTACTACCAGTGCGTTGCGTCTCAGTAA
back to top

Coding sequence (CDS) from alignment at ch3:4170011..4171249-

>KJC3_004191-T1 ID=KJC3_004191-T1|Name=KJC3_004191-T1|organism=Aspergillus niger KJC3|type=CDS|length=1239bp|location=Sequence derived from alignment at ch3:4170011..4171249- (Aspergillus niger KJC3)
ATGAAGACTACCACCTACAGTTTGCTCGCTCTGGCAGCGGCTTCCAAGCT
GGCTTCCGCCCACACCACCGTCCAGGCCGTCTGGATCAACGGCGAGGACC
AGGGTCTCGGTAACTCCGCCGATGGCTACATCCGCAGTCCCCCCAGCAAC
AGCCCCGTCACCGACGTCACGTCCACCGACATGACCTGCAACGTCAACGG
TGACCAGGCCGCCTCTAAGACCCTCTCCGTCAAGGCCGGTGACGTTGTCA
CCTTCGAGTGGCACCACAGCGACCGCTCCGACTCCGACGACATCATCGCC
TCCTCCCACAAGGGTCCCGTCCAGGTCTACATGGCCCCGACGGCCAAGGG
CTCCAACGGCAACAACTGGGTCAAGATCGCCGAGGACGGATACCACAAGA
GCTCCGACGAGTGGGCCACCGACATCCTGATCGCCAACAAGGGCAAGCAC
AACATCACTGTTCCCGACGTTCCCGCCGGTAACTACCTCTTCCGCCCTGA
GATCATTGCCCTCCACGAGGGTAACCGCGAGGGTGGTGCCCAGTTCTACA
TGGAGTGTGTCCAGTTCAAGGTCACCTCCGACGGCTCCAGCGAGCTTCCC
TCCGGTGTCTCCATCCCCGGCGTCTACACCGCCACTGACCCCGGTATCCT
CTTCGATATCTACAACTCCTTCGACAGCTACCCCATCCCCGGCCCGGATG
TCTGGGATGGCTCCAGCTCCGGCTCCAGCTCCGGATCTTCCTCCGCTGCT
GCTGCTGCTACCACCTCCGCTGCTGTCGCTGCTACTACCCCCGCCACCCA
GGCTGCCGTCGAGGTCTCTTCCTCCGCTGCTGCTGTCGTTGAGTCCACCT
CTTCCGCCGCCGCTGCTACCACCGAAGCTGCCGCTCCCGTCGTCAGCTCT
GCTGCCCCCGTCCAGCAGGCCACCTCCGCTGTCACCAGCCAGGCCCAGGC
CCCCACCACCTTCGCCACCTCTTCTAAGTCCTCCAAGACTGCCTGCAAGA
ACAAGACCAAGTCCAAGTCCAAGGTTGCTGCTTCCAGCACTGAGGCCGTC
GTTGCCCCCGCCCCTACTTCCAGCGTCGTCCCTGCTGTCAGTGCCAGCGC
TAGCGCTTCCGCTGGCGGTGTTGCTAAGATGTACGAGCGCTGCGGTGGTA
TCAACCACACTGGCCCTACTACGTGCGAGAGCGGCTCCGTTTGCAAGAAG
TGGAACCCTTACTACTACCAGTGCGTTGCGTCTCAGTAA
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005576extracellular region
Vocabulary: Molecular Function
TermDefinition
GO:0030248cellulose binding
Vocabulary: Biological Process
TermDefinition
GO:0005975carbohydrate metabolic process
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_004191KJC3_004191Aspergillus niger KJC3gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_004191-T1.cdsKJC3_004191-T1.cdsAspergillus niger KJC3CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_004191-T1.exon1KJC3_004191-T1.exon1Aspergillus niger KJC3exon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_004191-T1KJC3_004191-T1-proteinAspergillus niger KJC3polypeptide


Properties
Property NameValue
NoteSECRETED:SignalP(1-20)
NoteCAZy:AA9
DBxrefInterPro:IPR035971
DBxrefInterPro:IPR005103
DBxrefInterPro:IPR000254
DBxrefPFAM:PF03443
DBxrefPFAM:PF00734
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch3supercontigch3:4170011..4171249 -
Powered by Drupal