|
|
Sequences
The following sequences are available for this feature:
mRNA from alignment at ch3:4193678..4194928+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_004199-T1 ID=KJC3_004199-T1|Name=KJC3_004199-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1251bp|location=Sequence derived from alignment at ch3:4193678..4194928+ (Aspergillus niger KJC3)
CCCGAGCCATGATCCCTGCTCTTCTCCAGGTTTCAAATTCCTAGATTCAG
TCTGTCCTTCCACCTGCCCCTCCGCAATGACCACAATCAACGGTCACTGC
GATCCGGCCTTCACCGGGGTGCGCGATCTCCTACAGCAATTGATCAACAA
TGAAGAAGAGCTAGGAGCATCCATCTGTGTCAACATCGACGGTCAAAACG
TCGTCGATCTCTGGGGCGGCCACGCAGACCCAGCGAGAACCAAGCCATGG
GAAAAGGACACACTAACCGTGGTATGGTCCGTTTCCAAAGTAATTACCGC
CATCGCAACCAACATTCTCATCGACCGTGGCCTCTTAGACCCAAATGAGA
AGGTCTCCAAATACTGGCCCGAGTTCGCTGCGAACGGCAAGGAGAATATC
CTTGTGTCCCAGATCCTCAGTCACACCTCTGGAGTATCCTCCTGGGAGCT
TCCCAACACCTTAGACGACATATACGATGCGAAAAGAGGAGCCGATAAAC
TAGCCCGACAGGCCCCCTGGTGGACGCCCGGCGAACACTCCGGCTACCAC
GTAACCAACCAGGGCCACTTACTCGGCGAGCTGGTGCATCGTGTAACCGG
AAAACCGTTGGATGAGTTCATCCGCGACGAGCTTGCCAGTCCTCTGGCTG
CGGACTTCCAGCTCGGGGTCCCAGAGAAGGACTGGCCACGAACAGCAGAC
GTTTCCCCGCCGCCGCCACTGAGTCTCGACGGCGTTGACCCGCAGAGTGT
TATGTTCAAGAGCTTTGCCAGTCTGCCTATACCGGCGGAAGAAAGTATGA
GTCCTGGGTTTAGGAAGGCGTTGATTGGTGCCACGAATGGATTCTCTAAT
GCCCGAGGCATTGCGCGCATTGCGTCGGTCATTTCGCTTGGAGGCACGGT
GGATGGAAAGCAGTATCTCTCGCCTGAAACTATTGACCGCATGCTGGAGG
AGCAAATAAGTGGGCCAGATTTGGTCTTGATGTATCATTTGCGTTGGGGT
CTTGGTGTTGGGTTGCCCGTCCCGGAGACTTTTCCTTGGTTGCCCGACGG
TCGCATTGCTTTTTGGACGGGCTGGGGAGGTTCAGTTGTTGTTATGGACC
TGGAGAAACGGATGACGATTGCCTATGTGATGAATAAGATGGGACAAGGC
ACGTTGGGTTCGGATAGGACGGCGGCTTATGTGCGGGCTGTTTATGATTG
TCTTGCATAGATAGTATGTTAAGGCTCGCGAATGGAACACGATATATAAA
C back to topCoding sequence (CDS) from alignment at ch3:4193678..4194928+ >KJC3_004199-T1 ID=KJC3_004199-T1|Name=KJC3_004199-T1|organism=Aspergillus niger KJC3|type=CDS|length=1134bp|location=Sequence derived from alignment at ch3:4193678..4194928+ (Aspergillus niger KJC3)
ATGACCACAATCAACGGTCACTGCGATCCGGCCTTCACCGGGGTGCGCGA
TCTCCTACAGCAATTGATCAACAATGAAGAAGAGCTAGGAGCATCCATCT
GTGTCAACATCGACGGTCAAAACGTCGTCGATCTCTGGGGCGGCCACGCA
GACCCAGCGAGAACCAAGCCATGGGAAAAGGACACACTAACCGTGGTATG
GTCCGTTTCCAAAGTAATTACCGCCATCGCAACCAACATTCTCATCGACC
GTGGCCTCTTAGACCCAAATGAGAAGGTCTCCAAATACTGGCCCGAGTTC
GCTGCGAACGGCAAGGAGAATATCCTTGTGTCCCAGATCCTCAGTCACAC
CTCTGGAGTATCCTCCTGGGAGCTTCCCAACACCTTAGACGACATATACG
ATGCGAAAAGAGGAGCCGATAAACTAGCCCGACAGGCCCCCTGGTGGACG
CCCGGCGAACACTCCGGCTACCACGTAACCAACCAGGGCCACTTACTCGG
CGAGCTGGTGCATCGTGTAACCGGAAAACCGTTGGATGAGTTCATCCGCG
ACGAGCTTGCCAGTCCTCTGGCTGCGGACTTCCAGCTCGGGGTCCCAGAG
AAGGACTGGCCACGAACAGCAGACGTTTCCCCGCCGCCGCCACTGAGTCT
CGACGGCGTTGACCCGCAGAGTGTTATGTTCAAGAGCTTTGCCAGTCTGC
CTATACCGGCGGAAGAAAGTATGAGTCCTGGGTTTAGGAAGGCGTTGATT
GGTGCCACGAATGGATTCTCTAATGCCCGAGGCATTGCGCGCATTGCGTC
GGTCATTTCGCTTGGAGGCACGGTGGATGGAAAGCAGTATCTCTCGCCTG
AAACTATTGACCGCATGCTGGAGGAGCAAATAAGTGGGCCAGATTTGGTC
TTGATGTATCATTTGCGTTGGGGTCTTGGTGTTGGGTTGCCCGTCCCGGA
GACTTTTCCTTGGTTGCCCGACGGTCGCATTGCTTTTTGGACGGGCTGGG
GAGGTTCAGTTGTTGTTATGGACCTGGAGAAACGGATGACGATTGCCTAT
GTGATGAATAAGATGGGACAAGGCACGTTGGGTTCGGATAGGACGGCGGC
TTATGTGCGGGCTGTTTATGATTGTCTTGCATAG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_004199-T1.utr5p1 | KJC3_004199-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_004199-T1.utr3p1 | KJC3_004199-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Note | antiSMASH:Cluster_3.8 |
| Note | MEROPS:MER0011726 |
| Note | SMCOG1053:beta-lactamase |
| DBxref | InterPro:IPR012338 |
| DBxref | InterPro:IPR001466 |
| DBxref | PFAM:PF00144 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch3 | supercontig | ch3:4193678..4194928 + |
|
