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KJC3_004228-T1, KJC3_004228-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_004228-T1
Unique NameKJC3_004228-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch3:4278939..4279481+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_004228-T1 ID=KJC3_004228-T1|Name=KJC3_004228-T1|organism=Aspergillus niger KJC3|type=mRNA|length=543bp|location=Sequence derived from alignment at ch3:4278939..4279481+ (Aspergillus niger KJC3)
ATGCTCAAGCAAACCACCCATATCCTCAAAAAAACCCCAACGATCACCAC
ATATCCAATCCACCATCTACGAAACCTACAAACAACAACCCCTCGAACAA
TGTCCCTCTTACCACACCACCCCCGACCCGTCCCCTCCCTCCTGCGCGCC
TTCACCGATTTAGACAACTACCTCACTAGTACATCCACCGCTGCAGACTC
CCTGTTCCCTAATTCCCCGCGCTTTGACCTCCGCGAAACCAAAGACGCAT
ACATCCTAGACGGCGACCTGCCCGGCGTCAAGAAAGAAGACGTCACTATT
GAATTCAGTGATCCCAGCACGATGAATGTCAGGGGTCGCAGTGTGCGCAG
CACCGAGGGGGAGGATGGGAACTGGTGGTTCTCGGAACGTACGATGGGGG
AGTTTCGTCGCTCGTTTAGTTTCCCGGCCAAGGTGGATCGGGAGCATGTG
GATGCGAAGTTGACGGATGGGGTGTTGTCGATTCAGGTGCCGAAGGTGGA
GGAGGAGCCAGAGGAGGAGAGGAAGATTGTTGAGATCAAGTAG
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Coding sequence (CDS) from alignment at ch3:4278939..4279481+

>KJC3_004228-T1 ID=KJC3_004228-T1|Name=KJC3_004228-T1|organism=Aspergillus niger KJC3|type=CDS|length=543bp|location=Sequence derived from alignment at ch3:4278939..4279481+ (Aspergillus niger KJC3)
ATGCTCAAGCAAACCACCCATATCCTCAAAAAAACCCCAACGATCACCAC
ATATCCAATCCACCATCTACGAAACCTACAAACAACAACCCCTCGAACAA
TGTCCCTCTTACCACACCACCCCCGACCCGTCCCCTCCCTCCTGCGCGCC
TTCACCGATTTAGACAACTACCTCACTAGTACATCCACCGCTGCAGACTC
CCTGTTCCCTAATTCCCCGCGCTTTGACCTCCGCGAAACCAAAGACGCAT
ACATCCTAGACGGCGACCTGCCCGGCGTCAAGAAAGAAGACGTCACTATT
GAATTCAGTGATCCCAGCACGATGAATGTCAGGGGTCGCAGTGTGCGCAG
CACCGAGGGGGAGGATGGGAACTGGTGGTTCTCGGAACGTACGATGGGGG
AGTTTCGTCGCTCGTTTAGTTTCCCGGCCAAGGTGGATCGGGAGCATGTG
GATGCGAAGTTGACGGATGGGGTGTTGTCGATTCAGGTGCCGAAGGTGGA
GGAGGAGCCAGAGGAGGAGAGGAAGATTGTTGAGATCAAGTAG
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_004228KJC3_004228Aspergillus niger KJC3gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_004228-T1.exon1KJC3_004228-T1.exon1Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_004228-T1.cdsKJC3_004228-T1.cdsAspergillus niger KJC3CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_004228-T1KJC3_004228-T1-proteinAspergillus niger KJC3polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR002068
DBxrefInterPro:IPR008978
DBxrefPFAM:PF00011
DBxrefPFAM:PF17886
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch3supercontigch3:4278939..4279481 +
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