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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch3:4281076..4283619+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_004230-T3 ID=KJC3_004230-T3|Name=KJC3_004230-T3|organism=Aspergillus niger KJC3|type=mRNA|length=2544bp|location=Sequence derived from alignment at ch3:4281076..4283619+ (Aspergillus niger KJC3)
GAACCTGGCGATATTCAACAAAATAGCCGAGGTAGGGGAACGACGGTTCA
GTCAGTCATCTGTACAGACGCTCAGTGGTCGAAAAGTAGCTAACTTGTTC
GAACAGGCTATTGTATCCGTGCCATTCGCAGATCTCAATGCAGATTGCGT
TGGCCAAGCCAGACATGGGCTGCAATTGCCTAAGCTTCGCTGTCACGGAA
TTGGAATGATTGACAAAGATGCTGCGCCGTAACCGATTGAGATATGAGTT
GCGTTCTGCTTACATCGCTTAATTAGACATGATCGGGATACTCCTAGCTG
CTTCACCCTCAGCACCTTTCTTGCGATATCGGACAACCGCAACTGCAGAA
ACATTGTTATCTCAATTATGGGGCATCGACCAGCCCTCTTTATCTATTTA
TCTCCCACAATGGCCATTACCAAATTCAATGAGGCTTCTGGGGTTGGGCT
TGGCGGCCCAGGGACTCCCGACTGGCTGTTGACCCGAGGTCCAACAACCC
CCATCGGCCGGATCCGATGGAAAGGCAGCCGGCAGGTGGAGAAAAGTCCA
ACGACGATCCCCAAATTCTCCAGCGGGGAAAAGGACAAGACGCCTGCCAG
CTTGGCGATCGATGCCTGTCTCTCGCGATCCTTTGACTTTGGCACAGCTT
CGGTTACAGGAATCCTCTTCTAGTCCGGAATGCCCCAAGTCCACGCGACA
GACGGGCGCCGCCGATGGCCGACCCATCTGCAAATTGCTGGGACGCTTTT
TATAAAATGTCCGCACCGGAGACCAGGGTTCAACGGCGTGAGCCAAGTCC
AATTGATCACTACATGCGGGGACATCCTGGCTGATGTCGCGATCGTTGCA
TAGAATCTTCTACTGCATGTCTTAGCCATGCAACCATACTTCGGCCTACG
CGGCGCTCTTTTGAATCGCGCCATCATCTGGCTGGTCGTCTGCCCGGCCT
TTGTGTGCTATGGATACAACCAGGGAGTGACGGGAGGTCTCCTCACGCTG
GAGTCGTTTGCGGAGACGTTTCCCCAGATGAACACTTTGACCACCACTGG
GGCCCAGCAGCACTACAACTCCACCATCCAGGGTAAGGCGCCCGCTCCCT
CACAACTGCCCTCCCTCTCCCGGTCTAACCATCCACAGGTACGGTGGTCG
CACTGTACACCGTCGGCGGCATATTCGGATCCCTGTCATGCATCTACCTC
GGTGATCTCCTCGGCCGGCGAAAGGTGATCTTTCTCACTTCAGCTATCTC
GATAATTGGGGCCCTGCTGATGGCCACTTCCTTCGGACTGGCTCAATTCA
TCGTGGCACGTGTTGTGCTGGGGCTGGGAACGGGCGGCTATGTTGCAACT
GTGCCCGTGTGGCAGGCCGAGATCTCGCAGGCGGGCAAGCGTGGTGCCCA
TGTAGTGACGGACGGTATCTTCATTGGGGCGGGAATCACAATCTCGCTGT
GGATTGATTTCGGGTTTTATTTCGTTACGGGTAACTCCGTGTCGTGGCGG
TTCCCGCTAGCCTTCCAGATCGTCCTGTCACTCATGGTGATGGCCTTCAT
CATATTTTTCCCAGAGTCGCCCCGGTGGCTGATAAAGCGGAACCGGACCG
AGGAGGCCCGCGAGATCCTGGCTGCGCTGGCCGACCTCGATCCGGACGAC
GAAAGCATCACACTGGCTGTGCGCGACATTGAGCGGTCGCTGGCCCTCTC
GGGAACGGGGTCGTGGAAGGACATGCTGAGCATGGGCGAACAGCGACTCT
TCCATCGGACGGTGTTGGCTGCAGCAGGTCAGATGTTCCAGCAAATGTGC
GGAATCAATCTCATCACCTTTTACGCCACAACCATTTTCCAACAGTACTT
GGGCCTGGATGCCATACCATCACGCATTCTGGCTGCCGCCATGTGCCTCA
CCCAGCCACTGGGTGGATTCCTCGCTTTCTTCACGATTGACCGGCTCGGT
CGGCGAGTCCTGATGCTGTGGAGTGCTGTGGGCATGTCCGCCTCGATGGC
CATCCTGGCGGGAACAACGTCTCGATCCAACGATACCGCGGCGCTGGTCG
TAGCGGTGGTGTTCCTGTTCGTGTTCGAATTCATCTTCACCGTCGGATAC
TCGGGTCTGACCTTCCTGTACGCGACGGAGGTCGCACCGCTGCAACTTCG
AGCGGCCATCAGTGCCGTATCAACAGCGGCCGTGTGGACCTTCAATTTCC
TCCTCGCTGAAGTGACCCCGGTGGGCTTTGATACGATCGGATACCAATAT
TACATCATCTTCGCGGTGTTGAACGCAGTGATTGTGCCGATCGTGTACTT
CTTCTTCCCGGAGACGAATGGTCGGTCGCTGGAGGAGATCGACGAAATCT
TCCTGCAGTCGAAGAGCGTGTTTGACCCTCCGCGACTGGCGAGGACATTG
CCGCGGATGCATCTGGCAGAGGTGGTGGATGATCCGGAGGAGGTGGCCGA
TGCGAAGGTGGGCAAGAGTTGAGGGTTATGATTGATGATTATGATATGCT
TGAATTGCGGATTACATAGCTTTTTGATGTTAGTCGAATCGGAC back to topCoding sequence (CDS) from alignment at ch3:4281076..4283619+ >KJC3_004230-T3 ID=KJC3_004230-T3|Name=KJC3_004230-T3|organism=Aspergillus niger KJC3|type=CDS|length=5013bp|location=Sequence derived from alignment at ch3:4281076..4283619+ (Aspergillus niger KJC3)
ATGCCCCAAGTCCACGCGACAGACGGGCGCCGCCGATGGCCGACCCATCT
GCAAATTGCTGGGACGCTTTTTATAAAATGTCCGCACCGGAGACCAGGGT
TCAACGGCAATCTTCTACTGCATGTCTTAGCCATGCAACCATACTTCGGC
CTACGCGGCGCTCTTTTGAATCGCGCCATCATCTGGCTGGTCGTCTGCCC
GGCCTTTGTGTGCTATGGATACAACCAGGGAGTGACGGGAGGTCTCCTCA
CGCTGGAGTCGTTTGCGGAGACGTTTCCCCAGATGAACACTTTGACCACC
ACTGGGGCCCAGCAGCACTACAACTCCACCATCCAGGGTACGGTGGTCGC
ACTGTACACCGTCGGCGGCATATTCGGATCCCTGTCATGCATCTACCTCG
GTGATCTCCTCGGCCGGCGAAAGGTGATCTTTCTCACTTCAGCTATCTCG
ATAATTGGGGCCCTGCTGATGGCCACTTCCTTCGGACTGGCTCAATTCAT
CGTGGCACGTGTTGTGCTGGGGCTGGGAACGGGCGGCTATGTTGCAACTG
TGCCCGTGTGGCAGGCCGAGATCTCGCAGGCGGGCAAGCGTGGTGCCCAT
GTAGTGACGGACGGTATCTTCATTGGGGCGGGAATCACAATCTCGCTGTG
GATTGATTTCGGGTTTTATTTCGTTACGGGTAACTCCGTGTCGTGGCGGT
TCCCGCTAGCCTTCCAGATCGTCCTGTCACTCATGGTGATGGCCTTCATC
ATATTTTTCCCAGAGTCGCCCCGGTGGCTGATAAAGCGGAACCGGACCGA
GGAGGCCCGCGAGATCCTGGCTGCGCTGGCCGACCTCGATCCGGACGACG
AAAGCATCACACTGGCTGTGCGCGACATTGAGCGGTCGCTGGCCCTCTCG
GGAACGGGGTCGTGGAAGGACATGCTGAGCATGGGCGAACAGCGACTCTT
CCATCGGACGGTGTTGGCTGCAGCAGGTCAGATGTTCCAGCAAATGTGCG
GAATCAATCTCATCACCTTTTACGCCACAACCATTTTCCAACAGTACTTG
GGCCTGGATGCCATACCATCACGCATTCTGGCTGCCGCCATGTGCCTCAC
CCAGCCACTGGGTGGATTCCTCGCTTTCTTCACGATTGACCGGCTCGGTC
GGCGAGTCCTGATGCTGTGGAGTGCTGTGGGCATGTCCGCCTCGATGGCC
ATCCTGGCGGGAACAACGTCTCGATCCAACGATACCGCGGCGCTGGTCGT
AGCGGTGGTGTTCCTGTTCGTGTTCGAATTCATCTTCACCGTCGGATACT
CGGGTCTGACCTTCCTGTACGCGACGGAGGTCGCACCGCTGCAACTTCGA
GCGGCCATCAGTGCCGTATCAACAGCGGCCGTGTGGACCTTCAATTTCCT
CCTCGCTGAAGTGACCCCGGTGGGCTTTGATACGATCGGATACCAATATT
ACATCATCTTCGCGGTGTTGAACGCAGTGATTGTGCCGATCGTGTACTTC
TTCTTCCCGGAGACGAATGGTCGGTCGCTGGAGGAGATCGACGAAATCTT
CCTGCAGTCGAAGAGCGTGTTTGACCCTCCGCGACTGGCGAGGACATTGC
CGCGGATGCATCTGGCAGAGGTGGTGGATGATCCGGAGGAGGTGGCCGAT
GCGAAGGTGGGCAAGAGTTGAATGCCCCAAGTCCACGCGACAGACGGGCG
CCGCCGATGGCCGACCCATCTGCAAATTGCTGGGACGCTTTTTATAAAAT
GTCCGCACCGGAGACCAGGGTTCAACGGCAATCTTCTACTGCATGTCTTA
GCCATGCAACCATACTTCGGCCTACGCGGCGCTCTTTTGAATCGCGCCAT
CATCTGGCTGGTCGTCTGCCCGGCCTTTGTGTGCTATGGATACAACCAGG
GAGTGACGGGAGGTCTCCTCACGCTGGAGTCGTTTGCGGAGACGTTTCCC
CAGATGAACACTTTGACCACCACTGGGGCCCAGCAGCACTACAACTCCAC
CATCCAGGGTACGGTGGTCGCACTGTACACCGTCGGCGGCATATTCGGAT
CCCTGTCATGCATCTACCTCGGTGATCTCCTCGGCCGGCGAAAGGTGATC
TTTCTCACTTCAGCTATCTCGATAATTGGGGCCCTGCTGATGGCCACTTC
CTTCGGACTGGCTCAATTCATCGTGGCACGTGTTGTGCTGGGGCTGGGAA
CGGGCGGCTATGTTGCAACTGTGCCCGTGTGGCAGGCCGAGATCTCGCAG
GCGGGCAAGCGTGGTGCCCATGTAGTGACGGACGGTATCTTCATTGGGGC
GGGAATCACAATCTCGCTGTGGATTGATTTCGGGTTTTATTTCGTTACGG
GTAACTCCGTGTCGTGGCGGTTCCCGCTAGCCTTCCAGATCGTCCTGTCA
CTCATGGTGATGGCCTTCATCATATTTTTCCCAGAGTCGCCCCGGTGGCT
GATAAAGCGGAACCGGACCGAGGAGGCCCGCGAGATCCTGGCTGCGCTGG
CCGACCTCGATCCGGACGACGAAAGCATCACACTGGCTGTGCGCGACATT
GAGCGGTCGCTGGCCCTCTCGGGAACGGGGTCGTGGAAGGACATGCTGAG
CATGGGCGAACAGCGACTCTTCCATCGGACGGTGTTGGCTGCAGCAGGTC
AGATGTTCCAGCAAATGTGCGGAATCAATCTCATCACCTTTTACGCCACA
ACCATTTTCCAACAGTACTTGGGCCTGGATGCCATACCATCACGCATTCT
GGCTGCCGCCATGTGCCTCACCCAGCCACTGGGTGGATTCCTCGCTTTCT
TCACGATTGACCGGCTCGGTCGGCGAGTCCTGATGCTGTGGAGTGCTGTG
GGCATGTCCGCCTCGATGGCCATCCTGGCGGGAACAACGTCTCGATCCAA
CGATACCGCGGCGCTGGTCGTAGCGGTGGTGTTCCTGTTCGTGTTCGAAT
TCATCTTCACCGTCGGATACTCGGGTCTGACCTTCCTGTACGCGACGGAG
GTCGCACCGCTGCAACTTCGAGCGGCCATCAGTGCCGTATCAACAGCGGC
CGTGTGGACCTTCAATTTCCTCCTCGCTGAAGTGACCCCGGTGGGCTTTG
ATACGATCGGATACCAATATTACATCATCTTCGCGGTGTTGAACGCAGTG
ATTGTGCCGATCGTGTACTTCTTCTTCCCGGAGACGAATGGTCGGTCGCT
GGAGGAGATCGACGAAATCTTCCTGCAGTCGAAGAGCGTGTTTGACCCTC
CGCGACTGGCGAGGACATTGCCGCGGATGCATCTGGCAGAGGTGGTGGAT
GATCCGGAGGAGGTGGCCGATGCGAAGGTGGGCAAGAGTTGAATGCCCCA
AGTCCACGCGACAGACGGGCGCCGCCGATGGCCGACCCATCTGCAAATTG
CTGGGACGCTTTTTATAAAATGTCCGCACCGGAGACCAGGGTTCAACGGC
AATCTTCTACTGCATGTCTTAGCCATGCAACCATACTTCGGCCTACGCGG
CGCTCTTTTGAATCGCGCCATCATCTGGCTGGTCGTCTGCCCGGCCTTTG
TGTGCTATGGATACAACCAGGGAGTGACGGGAGGTCTCCTCACGCTGGAG
TCGTTTGCGGAGACGTTTCCCCAGATGAACACTTTGACCACCACTGGGGC
CCAGCAGCACTACAACTCCACCATCCAGGGTACGGTGGTCGCACTGTACA
CCGTCGGCGGCATATTCGGATCCCTGTCATGCATCTACCTCGGTGATCTC
CTCGGCCGGCGAAAGGTGATCTTTCTCACTTCAGCTATCTCGATAATTGG
GGCCCTGCTGATGGCCACTTCCTTCGGACTGGCTCAATTCATCGTGGCAC
GTGTTGTGCTGGGGCTGGGAACGGGCGGCTATGTTGCAACTGTGCCCGTG
TGGCAGGCCGAGATCTCGCAGGCGGGCAAGCGTGGTGCCCATGTAGTGAC
GGACGGTATCTTCATTGGGGCGGGAATCACAATCTCGCTGTGGATTGATT
TCGGGTTTTATTTCGTTACGGGTAACTCCGTGTCGTGGCGGTTCCCGCTA
GCCTTCCAGATCGTCCTGTCACTCATGGTGATGGCCTTCATCATATTTTT
CCCAGAGTCGCCCCGGTGGCTGATAAAGCGGAACCGGACCGAGGAGGCCC
GCGAGATCCTGGCTGCGCTGGCCGACCTCGATCCGGACGACGAAAGCATC
ACACTGGCTGTGCGCGACATTGAGCGGTCGCTGGCCCTCTCGGGAACGGG
GTCGTGGAAGGACATGCTGAGCATGGGCGAACAGCGACTCTTCCATCGGA
CGGTGTTGGCTGCAGCAGGTCAGATGTTCCAGCAAATGTGCGGAATCAAT
CTCATCACCTTTTACGCCACAACCATTTTCCAACAGTACTTGGGCCTGGA
TGCCATACCATCACGCATTCTGGCTGCCGCCATGTGCCTCACCCAGCCAC
TGGGTGGATTCCTCGCTTTCTTCACGATTGACCGGCTCGGTCGGCGAGTC
CTGATGCTGTGGAGTGCTGTGGGCATGTCCGCCTCGATGGCCATCCTGGC
GGGAACAACGTCTCGATCCAACGATACCGCGGCGCTGGTCGTAGCGGTGG
TGTTCCTGTTCGTGTTCGAATTCATCTTCACCGTCGGATACTCGGGTCTG
ACCTTCCTGTACGCGACGGAGGTCGCACCGCTGCAACTTCGAGCGGCCAT
CAGTGCCGTATCAACAGCGGCCGTGTGGACCTTCAATTTCCTCCTCGCTG
AAGTGACCCCGGTGGGCTTTGATACGATCGGATACCAATATTACATCATC
TTCGCGGTGTTGAACGCAGTGATTGTGCCGATCGTGTACTTCTTCTTCCC
GGAGACGAATGGTCGGTCGCTGGAGGAGATCGACGAAATCTTCCTGCAGT
CGAAGAGCGTGTTTGACCCTCCGCGACTGGCGAGGACATTGCCGCGGATG
CATCTGGCAGAGGTGGTGGATGATCCGGAGGAGGTGGCCGATGCGAAGGT
GGGCAAGAGTTGA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0016021 | integral component of membrane |
| GO:0016020 | membrane |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0055085 | transmembrane transport |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0022857 | transmembrane transporter activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_004230-T3.utr3p1 | KJC3_004230-T3.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR036259 |
| DBxref | InterPro:IPR020846 |
| DBxref | InterPro:IPR005829 |
| DBxref | InterPro:IPR005828 |
| DBxref | InterPro:IPR003663 |
| DBxref | PFAM:PF00083 |
| DBxref | PFAM:PF07690 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch3 | supercontig | ch3:4281076..4283619 + |
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