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KJC3_004249-T1, KJC3_004249-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_004249-T1
Unique NameKJC3_004249-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch3:4329408..4330392-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_004249-T1 ID=KJC3_004249-T1|Name=KJC3_004249-T1|organism=Aspergillus niger KJC3|type=mRNA|length=985bp|location=Sequence derived from alignment at ch3:4329408..4330392- (Aspergillus niger KJC3)
GTCTGATATACAATTCTATTCTAAGTAGCCTATCATACACTCAGCGACTT
GCTACTAAGCGCCGGTCTACATTCAATTCCCCATCATGCAAAATCTTGAG
CCCTCAGCCCTCTTGAATAAAGTTGCTATCAGCCTATCGATTCGGTGGCA
TGTAATCGGTGTCTGGCGGCTAAACGAGCATATGACGACGACGATTAACT
TCAGCTGTGCGGTTCGTATGTAAGTTTATTGGATCATTGGCTATCTTTTG
TTCGTTATAGTGTATCCTTTAGCGCCTGGGTTGCATTTGAGGGGTGCTGC
TAATCCTAGGCACCTACCATCCATACATTATTGACATACAAATAGCCCTC
CCTTAAACCTGCTCCTTCCTCTCCATCAAGCAAGCAAACAAACACCCTTC
CATAAAATATTATTCTTATCCCAGAACGCAAAACGCAAGCAGACCTATTT
CGAAAACTCCTTCGCAATGTTCAAAGCAACAGCACGTTCTTTGTACCAAC
TTATTGGGAAGACAAGATTGGGTGACCTTCCTCCCGAATGGCAGGCTCCT
GTCGGACAGGTCCTTGACGCTGAAGAAAAGAGTGTGAGTTGATGTATTCC
ATCTTTGGCTTTGTACCAAGTACTGATGCGTGCGCCATAGGACCCCAGGT
TCAAGAATGCTGAGATCCGGTAACCCTCAGACTCCCCAACGGAATTCTGG
GACAATTGTGAGTTCAGAGCTAATCACTTTTCATAGAGGCTCTAAGCCAC
ATGCTTCCCACGATGATCCGACCGACCCGAAAGATGTTGTGTCCGTCCGT
ATCAAGGATGATGGCCTGAAAACTTTCCGGAGACTGCACATACATCAAGA
TGGCTCGGTCAAACGAATTGATGTTTAGTGTGCTTGTTGGGGTCAATTAC
TCGAGACCAGTTGGATGGGTAAGGATGCCGTCTTGGGAGACTTGGCGAGA
TCCTTCCCACTATTTGTATTGATAGGGTTATGCTC
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Coding sequence (CDS) from alignment at ch3:4329408..4330392-

>KJC3_004249-T1 ID=KJC3_004249-T1|Name=KJC3_004249-T1|organism=Aspergillus niger KJC3|type=CDS|length=1752bp|location=Sequence derived from alignment at ch3:4329408..4330392- (Aspergillus niger KJC3)
AGGCTCTAAGCCACATGCTTCCCACGATGATCCGACCGACCCGAAAGATG
TTGTGTCCGTCCGTATCAAGGATGATGGCCTGAAAACTTTCCGGAGACTG
CACATACATCAAGATGGCTCGGTCAAACGAATTGATGTTTAGGACCCCAG
GTTCAAGAATGCTGAGATCCGACCTATTTCGAAAACTCCTTCGCAATGTT
CAAAGCAACAGCACGTTCTTTGTACCAACTTATTGGGAAGACAAGATTGG
GTGACCTTCCTCCCGAATGGCAGGCTCCTGTCGGACAGGTCCTTGACGCT
GAAGAAAAGAGTATGCAAAATCTTGAGCCCTCAGCCCTCTTGAATAAAGT
TGCTATCAGCCTATCGATTCGGTGGCATGTAATCGGTGTCTGGCGGCTAA
ACGAGCATATGACGACGACGATTAACTTCAGCTGTGCGAGGCTCTAAGCC
ACATGCTTCCCACGATGATCCGACCGACCCGAAAGATGTTGTGTCCGTCC
GTATCAAGGATGATGGCCTGAAAACTTTCCGGAGACTGCACATACATCAA
GATGGCTCGGTCAAACGAATTGATGTTTAGGACCCCAGGTTCAAGAATGC
TGAGATCCGACCTATTTCGAAAACTCCTTCGCAATGTTCAAAGCAACAGC
ACGTTCTTTGTACCAACTTATTGGGAAGACAAGATTGGGTGACCTTCCTC
CCGAATGGCAGGCTCCTGTCGGACAGGTCCTTGACGCTGAAGAAAAGAGT
ATGCAAAATCTTGAGCCCTCAGCCCTCTTGAATAAAGTTGCTATCAGCCT
ATCGATTCGGTGGCATGTAATCGGTGTCTGGCGGCTAAACGAGCATATGA
CGACGACGATTAACTTCAGCTGTGCGAGGCTCTAAGCCACATGCTTCCCA
CGATGATCCGACCGACCCGAAAGATGTTGTGTCCGTCCGTATCAAGGATG
ATGGCCTGAAAACTTTCCGGAGACTGCACATACATCAAGATGGCTCGGTC
AAACGAATTGATGTTTAGGACCCCAGGTTCAAGAATGCTGAGATCCGACC
TATTTCGAAAACTCCTTCGCAATGTTCAAAGCAACAGCACGTTCTTTGTA
CCAACTTATTGGGAAGACAAGATTGGGTGACCTTCCTCCCGAATGGCAGG
CTCCTGTCGGACAGGTCCTTGACGCTGAAGAAAAGAGTATGCAAAATCTT
GAGCCCTCAGCCCTCTTGAATAAAGTTGCTATCAGCCTATCGATTCGGTG
GCATGTAATCGGTGTCTGGCGGCTAAACGAGCATATGACGACGACGATTA
ACTTCAGCTGTGCGAGGCTCTAAGCCACATGCTTCCCACGATGATCCGAC
CGACCCGAAAGATGTTGTGTCCGTCCGTATCAAGGATGATGGCCTGAAAA
CTTTCCGGAGACTGCACATACATCAAGATGGCTCGGTCAAACGAATTGAT
GTTTAGGACCCCAGGTTCAAGAATGCTGAGATCCGACCTATTTCGAAAAC
TCCTTCGCAATGTTCAAAGCAACAGCACGTTCTTTGTACCAACTTATTGG
GAAGACAAGATTGGGTGACCTTCCTCCCGAATGGCAGGCTCCTGTCGGAC
AGGTCCTTGACGCTGAAGAAAAGAGTATGCAAAATCTTGAGCCCTCAGCC
CTCTTGAATAAAGTTGCTATCAGCCTATCGATTCGGTGGCATGTAATCGG
TGTCTGGCGGCTAAACGAGCATATGACGACGACGATTAACTTCAGCTGTG
CG
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_004249KJC3_004249Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_004249-T1KJC3_004249-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_004249-T1.cdsKJC3_004249-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_004249-T1.utr3p1KJC3_004249-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_004249-T1.exon4KJC3_004249-T1.exon4Aspergillus niger KJC3exon
KJC3_004249-T1.exon3KJC3_004249-T1.exon3Aspergillus niger KJC3exon
KJC3_004249-T1.exon2KJC3_004249-T1.exon2Aspergillus niger KJC3exon
KJC3_004249-T1.exon1KJC3_004249-T1.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_004249-T1.utr5p1KJC3_004249-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch3supercontigch3:4329408..4330392 -
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