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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch3:4336554..4337821- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_004252-T1 ID=KJC3_004252-T1|Name=KJC3_004252-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1268bp|location=Sequence derived from alignment at ch3:4336554..4337821- (Aspergillus niger KJC3)
CACATAGTGTTGCTAAGATTGGTTTCTGGCTGCATGACCCTGCGGAATAG
CTCAGAATAACCAGAATGAATAAACATGGTTCACGTTAACGTTGACAGTT
TTAACAAACACACGGAAAAGGGCAGCAGGCGGGAGGGCGGTAGAGTCTTT
ATGTGTGTTTCCGAAAACCGACATCACGGCCCCGCACTGAAGAACTTCCT
TCATATCAACACACTCGCGCTCAAGCAACAGACACAGCCAAGATGCTTTC
CCTCCTCCTGTCTGCCGAACTCAGCGGGTATGTCTTGTTCCTACATTACT
AACTGGCCCTTTCACCTATCTATCCCTTCAGTCAAACCCCCAAAGTTCAT
TTGAAGTTTCCCCTCCGCAGAGATCCTTCCCCGCACCTCATCTCAAACCA
ACTCCAACTCACATATCTTCACCTCCAATAGCGTCACCGACCTCCGTCCC
AAGGACACCGAGGAAGAGCCCTACTACTTCACTTTCAAAGTGCAATGCAC
CTCTTGTCGTGAAACCCACCCCAACTGGGTCAGCTTCAACCGCTTCGTAA
GTCCGCTTCATCTCCCCCATCCTATAGATTCTCTGAACGGGAAACTTACT
CTGTATCCAGGAACAACATGAAATCCCCGGTAGTAGGGGCGAGGCGAACT
TTGTCTGGAAATGCAAGCTGTGCCAGGTGGGTTGACTTCTCCTTTCTAAC
TTCATTCTCGCAACTGAGAATACTGAAACATCGGGATGATGTGTTGATTG
GTACTAGAAAACCCACTCTGCCTCTATCACTGCCGGCCCCAACGTCTACG
AGGCGGATGAGAAGCGCACTGCGAAGAAGGTGATTGAGATTGACTGCAGA
GGATTGGAATTTACCGAGTTTAAGGCTGATGTAAGTGGTTAAATCGTCCT
TTTCTTTTTCTTTCTCCCTCTTTTGAGTCTTTTGTGGTCCTTTACAGTGC
TCTTTGTTGGGTTACCAAGGGATAGCAGCAGCTAACGACTTATCAGGGTG
AGTGGGAAGCGAAGGGAGCTGAGTCTTCTACTCCTTTCACCGGCATTGAT
TTGTCAGAGGAAGAGTGGTATGATTACGATGAGAAGGCGGGAGAGGAGGT
TTCGATCAAGGAGATCAACTTCCAGGTCGGAAGGGCATAAGGGACGGAAA
TCACAAGTGGTTCTTGTATTATCATTTAATGAGAAATGGAGTGTAGTTTA
GCCTGTGTAAGCGACGATAGAGCCTAAGGTTTCTTTGATGCTGTGTACGG
CTGTACAGAACTACGATG back to topCoding sequence (CDS) from alignment at ch3:4336554..4337821- >KJC3_004252-T1 ID=KJC3_004252-T1|Name=KJC3_004252-T1|organism=Aspergillus niger KJC3|type=CDS|length=2415bp|location=Sequence derived from alignment at ch3:4336554..4337821- (Aspergillus niger KJC3)
GGTGAGTGGGAAGCGAAGGGAGCTGAGTCTTCTACTCCTTTCACCGGCAT
TGATTTGTCAGAGGAAGAGTGGTATGATTACGATGAGAAGGCGGGAGAGG
AGGTTTCGATCAAGGAGATCAACTTCCAGGTCGGAAGGGCATAAAAAACC
CACTCTGCCTCTATCACTGCCGGCCCCAACGTCTACGAGGCGGATGAGAA
GCGCACTGCGAAGAAGGTGATTGAGATTGACTGCAGAGGATTGGAATTTA
CCGAGTTTAAGGCTGATGAACAACATGAAATCCCCGGTAGTAGGGGCGAG
GCGAACTTTGTCTGGAAATGCAAGCTGTGCCAGCGTCACCGACCTCCGTC
CCAAGGACACCGAGGAAGAGCCCTACTACTTCACTTTCAAAGTGCAATGC
ACCTCTTGTCGTGAAACCCACCCCAACTGGGTCAGCTTCAACCGCTTCAT
GCTTTCCCTCCTCCTGTCTGCCGAACTCAGCGGGGTGAGTGGGAAGCGAA
GGGAGCTGAGTCTTCTACTCCTTTCACCGGCATTGATTTGTCAGAGGAAG
AGTGGTATGATTACGATGAGAAGGCGGGAGAGGAGGTTTCGATCAAGGAG
ATCAACTTCCAGGTCGGAAGGGCATAAAAAACCCACTCTGCCTCTATCAC
TGCCGGCCCCAACGTCTACGAGGCGGATGAGAAGCGCACTGCGAAGAAGG
TGATTGAGATTGACTGCAGAGGATTGGAATTTACCGAGTTTAAGGCTGAT
GAACAACATGAAATCCCCGGTAGTAGGGGCGAGGCGAACTTTGTCTGGAA
ATGCAAGCTGTGCCAGCGTCACCGACCTCCGTCCCAAGGACACCGAGGAA
GAGCCCTACTACTTCACTTTCAAAGTGCAATGCACCTCTTGTCGTGAAAC
CCACCCCAACTGGGTCAGCTTCAACCGCTTCATGCTTTCCCTCCTCCTGT
CTGCCGAACTCAGCGGGGTGAGTGGGAAGCGAAGGGAGCTGAGTCTTCTA
CTCCTTTCACCGGCATTGATTTGTCAGAGGAAGAGTGGTATGATTACGAT
GAGAAGGCGGGAGAGGAGGTTTCGATCAAGGAGATCAACTTCCAGGTCGG
AAGGGCATAAAAAACCCACTCTGCCTCTATCACTGCCGGCCCCAACGTCT
ACGAGGCGGATGAGAAGCGCACTGCGAAGAAGGTGATTGAGATTGACTGC
AGAGGATTGGAATTTACCGAGTTTAAGGCTGATGAACAACATGAAATCCC
CGGTAGTAGGGGCGAGGCGAACTTTGTCTGGAAATGCAAGCTGTGCCAGC
GTCACCGACCTCCGTCCCAAGGACACCGAGGAAGAGCCCTACTACTTCAC
TTTCAAAGTGCAATGCACCTCTTGTCGTGAAACCCACCCCAACTGGGTCA
GCTTCAACCGCTTCATGCTTTCCCTCCTCCTGTCTGCCGAACTCAGCGGG
GTGAGTGGGAAGCGAAGGGAGCTGAGTCTTCTACTCCTTTCACCGGCATT
GATTTGTCAGAGGAAGAGTGGTATGATTACGATGAGAAGGCGGGAGAGGA
GGTTTCGATCAAGGAGATCAACTTCCAGGTCGGAAGGGCATAAAAAACCC
ACTCTGCCTCTATCACTGCCGGCCCCAACGTCTACGAGGCGGATGAGAAG
CGCACTGCGAAGAAGGTGATTGAGATTGACTGCAGAGGATTGGAATTTAC
CGAGTTTAAGGCTGATGAACAACATGAAATCCCCGGTAGTAGGGGCGAGG
CGAACTTTGTCTGGAAATGCAAGCTGTGCCAGCGTCACCGACCTCCGTCC
CAAGGACACCGAGGAAGAGCCCTACTACTTCACTTTCAAAGTGCAATGCA
CCTCTTGTCGTGAAACCCACCCCAACTGGGTCAGCTTCAACCGCTTCATG
CTTTCCCTCCTCCTGTCTGCCGAACTCAGCGGGGTGAGTGGGAAGCGAAG
GGAGCTGAGTCTTCTACTCCTTTCACCGGCATTGATTTGTCAGAGGAAGA
GTGGTATGATTACGATGAGAAGGCGGGAGAGGAGGTTTCGATCAAGGAGA
TCAACTTCCAGGTCGGAAGGGCATAAAAAACCCACTCTGCCTCTATCACT
GCCGGCCCCAACGTCTACGAGGCGGATGAGAAGCGCACTGCGAAGAAGGT
GATTGAGATTGACTGCAGAGGATTGGAATTTACCGAGTTTAAGGCTGATG
AACAACATGAAATCCCCGGTAGTAGGGGCGAGGCGAACTTTGTCTGGAAA
TGCAAGCTGTGCCAGCGTCACCGACCTCCGTCCCAAGGACACCGAGGAAG
AGCCCTACTACTTCACTTTCAAAGTGCAATGCACCTCTTGTCGTGAAACC
CACCCCAACTGGGTCAGCTTCAACCGCTTCATGCTTTCCCTCCTCCTGTC
TGCCGAACTCAGCGG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_004252-T1.utr3p1 | KJC3_004252-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_004252-T1.utr5p1 | KJC3_004252-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
| Property Name | Value |
|---|
| Note | BUSCO:EOG09264X31 |
| DBxref | InterPro:IPR008584 |
| DBxref | PFAM:PF05907 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch3 | supercontig | ch3:4336554..4337821 - |
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