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KJC3_004299-T1, KJC3_004299-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_004299-T1
Unique NameKJC3_004299-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch3:4468961..4470067-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_004299-T1 ID=KJC3_004299-T1|Name=KJC3_004299-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1107bp|location=Sequence derived from alignment at ch3:4468961..4470067- (Aspergillus niger KJC3)
ATGGGAACTCCACTTGTTGGTACCGCTATTATCACCGGGGCGAATGGATT
GCTCGGGTCGGAGATAGCTGTCTCGATTGCCAAAGCACAGCCGTTTGTTC
ACTTGCTGCTGGTGGCCCGCGATATCAGATCCGACAGCGTCAAGGATGTG
ACGGACAGGATCCGTCTCATCGGACCCCGCTCCGTCGAGGTGGTTAAAGC
AGACCTTGCCTGCTTTAACTCCGTCGTGAGCTTTTCCCAATACACCGTCG
AGAGGGTACGAAGTAAAGAGATCCCTCCCGTGATCTTGTTGATCAACTCC
GCCGCAACTTCGTCATACGTTACCGATCAAGTCACACGAGATGGGTACGA
TCCCGTCTACCAGACCAACTGCATCGCGCCGTTCCTGTTGACTGTGAGCC
TGCTCGAGGCCTTCCGCGCAGGCGACGGTACACCGAACGGTGGTGCTCGA
GTAATCAATATCGGGTGCTCCTCCATGTCCAAGGGATCCCTGGACTATTT
TGACAGCGAAGACCCGGAGAGCGCTGCCCAGCCGCCAGGAACACCAATTG
GCGCCAAGGAAGCGACCAGTCGCTTCGGAAGTAGTAAGTTGTTAATGAGC
GCTGCTATGTATGCCTTGCGTCGAAGTCTGGTACTTGTGAGTTGTCCTCC
CCTACGGTCCCCTCTGTCCCAAAGTACCCCACTAACAAAAGCCGAATGGG
GGTAGACGGGCAACATCTCGCTCAATGTATACACAATGGATCCCGGCGGT
ATGACCGGAGAGAGCCACCTAACGACCGATGCCCCGTTATCGGTCCGAAT
GGCACACCAGACGCGGTCTGGACTCCGGCCATTCCTGCGGGTGTTTTCCA
AGAGTGCGATAAACAAGGCTAGCGTTCCAGCCAAGGTCATTGCAAGAGTC
GCATTTCAAAAGGAGACGGTGGAGAACTGGGGAAGGGAACGATATTATAT
CTTGGATAGCGAATACGAGGCCGCATCCGTCATTCCGGCCTTGCGGGATG
TGCCGCGCATGGATGGGCTGCTGCAGAAGGTTATGCGACAGATCGAGATA
GGCGTCAAAGGCATGGGATCGCCTCAATCAAGAGTATCGCGGCTGACTGC
TCGTTAG
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Coding sequence (CDS) from alignment at ch3:4468961..4470067-

>KJC3_004299-T1 ID=KJC3_004299-T1|Name=KJC3_004299-T1|organism=Aspergillus niger KJC3|type=CDS|length=2076bp|location=Sequence derived from alignment at ch3:4468961..4470067- (Aspergillus niger KJC3)
ACGGGCAACATCTCGCTCAATGTATACACAATGGATCCCGGCGGTATGAC
CGGAGAGAGCCACCTAACGACCGATGCCCCGTTATCGGTCCGAATGGCAC
ACCAGACGCGGTCTGGACTCCGGCCATTCCTGCGGGTGTTTTCCAAGAGT
GCGATAAACAAGGCTAGCGTTCCAGCCAAGGTCATTGCAAGAGTCGCATT
TCAAAAGGAGACGGTGGAGAACTGGGGAAGGGAACGATATTATATCTTGG
ATAGCGAATACGAGGCCGCATCCGTCATTCCGGCCTTGCGGGATGTGCCG
CGCATGGATGGGCTGCTGCAGAAGGTTATGCGACAGATCGAGATAGGCGT
CAAAGGCATGGGATCGCCTCAATCAAGAGTATCGCGGCTGACTGCTCGTT
AGATGGGAACTCCACTTGTTGGTACCGCTATTATCACCGGGGCGAATGGA
TTGCTCGGGTCGGAGATAGCTGTCTCGATTGCCAAAGCACAGCCGTTTGT
TCACTTGCTGCTGGTGGCCCGCGATATCAGATCCGACAGCGTCAAGGATG
TGACGGACAGGATCCGTCTCATCGGACCCCGCTCCGTCGAGGTGGTTAAA
GCAGACCTTGCCTGCTTTAACTCCGTCGTGAGCTTTTCCCAATACACCGT
CGAGAGGGTACGAAGTAAAGAGATCCCTCCCGTGATCTTGTTGATCAACT
CCGCCGCAACTTCGTCATACGTTACCGATCAAGTCACACGAGATGGGTAC
GATCCCGTCTACCAGACCAACTGCATCGCGCCGTTCCTGTTGACTGTGAG
CCTGCTCGAGGCCTTCCGCGCAGGCGACGGTACACCGAACGGTGGTGCTC
GAGTAATCAATATCGGGTGCTCCTCCATGTCCAAGGGATCCCTGGACTAT
TTTGACAGCGAAGACCCGGAGAGCGCTGCCCAGCCGCCAGGAACACCAAT
TGGCGCCAAGGAAGCGACCAGTCGCTTCGGAAGTAGTAAGTTGTTAATGA
GCGCTGCTATGTATGCCTTGCGTCGAAGTCTGGTACTTACGGGCAACATC
TCGCTCAATGTATACACAATGGATCCCGGCGGTATGACCGGAGAGAGCCA
CCTAACGACCGATGCCCCGTTATCGGTCCGAATGGCACACCAGACGCGGT
CTGGACTCCGGCCATTCCTGCGGGTGTTTTCCAAGAGTGCGATAAACAAG
GCTAGCGTTCCAGCCAAGGTCATTGCAAGAGTCGCATTTCAAAAGGAGAC
GGTGGAGAACTGGGGAAGGGAACGATATTATATCTTGGATAGCGAATACG
AGGCCGCATCCGTCATTCCGGCCTTGCGGGATGTGCCGCGCATGGATGGG
CTGCTGCAGAAGGTTATGCGACAGATCGAGATAGGCGTCAAAGGCATGGG
ATCGCCTCAATCAAGAGTATCGCGGCTGACTGCTCGTTAGATGGGAACTC
CACTTGTTGGTACCGCTATTATCACCGGGGCGAATGGATTGCTCGGGTCG
GAGATAGCTGTCTCGATTGCCAAAGCACAGCCGTTTGTTCACTTGCTGCT
GGTGGCCCGCGATATCAGATCCGACAGCGTCAAGGATGTGACGGACAGGA
TCCGTCTCATCGGACCCCGCTCCGTCGAGGTGGTTAAAGCAGACCTTGCC
TGCTTTAACTCCGTCGTGAGCTTTTCCCAATACACCGTCGAGAGGGTACG
AAGTAAAGAGATCCCTCCCGTGATCTTGTTGATCAACTCCGCCGCAACTT
CGTCATACGTTACCGATCAAGTCACACGAGATGGGTACGATCCCGTCTAC
CAGACCAACTGCATCGCGCCGTTCCTGTTGACTGTGAGCCTGCTCGAGGC
CTTCCGCGCAGGCGACGGTACACCGAACGGTGGTGCTCGAGTAATCAATA
TCGGGTGCTCCTCCATGTCCAAGGGATCCCTGGACTATTTTGACAGCGAA
GACCCGGAGAGCGCTGCCCAGCCGCCAGGAACACCAATTGGCGCCAAGGA
AGCGACCAGTCGCTTCGGAAGTAGTAAGTTGTTAATGAGCGCTGCTATGT
ATGCCTTGCGTCGAAGTCTGGTACTT
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_004299KJC3_004299Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_004299-T1KJC3_004299-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_004299-T1.cdsKJC3_004299-T1.cdsAspergillus niger KJC3CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_004299-T1.exon2KJC3_004299-T1.exon2Aspergillus niger KJC3exon
KJC3_004299-T1.exon1KJC3_004299-T1.exon1Aspergillus niger KJC3exon


Properties
Property NameValue
DBxrefInterPro:IPR036291
DBxrefInterPro:IPR002347
DBxrefPFAM:PF08659
DBxrefPFAM:PF00106
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch3supercontigch3:4468961..4470067 -
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