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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch3:4491172..4492204+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_004307-T1 ID=KJC3_004307-T1|Name=KJC3_004307-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1033bp|location=Sequence derived from alignment at ch3:4491172..4492204+ (Aspergillus niger KJC3)
ATGACTGACAGACGAAGAATCAATGGGCCGCCTAGCGGCACGAGGCCGGC
CGTTTTCGCCTCCTCTCTCAAGTCCGCTTCTAGCATTTCTACCGGCAGAC
CACGACGTCAAAGGCAGCCGGATGAGCTTCGCAAGATCTGTAAGAATAAC
TGCAACTCTTCTTGTATGGTACCATGGCTAATACACTCTCTCTCCAGTTC
TGAAGACAGGTCTCATCCCTTCGGCATCTGGTTCTTCCTATCTTGAATTC
GAACCCTCCGCATCACTTGCTGCTGCACGCTCAAACCCCCAATCCCTGAT
TCCTCCGTCCTCTGCATTGAAGCTTGCCTGCACAGTTCATGGCCCTAAGC
CCCTGCCACGCTCGGCTAGCTTTTCGCCTAACGTCGTCCTTACGACACAC
GTCAAGTATGCGCCGTTTGCTGCCCGCCAGAGGAAGGGGCATATCCGCGA
TGCTAGCGAACGGGACCTGGGTGTGCATTTAGAGACGGCGCTTAGAGGCG
TCATTGTTGCTGAGCGCTGGCCCAAGAGTGGCCTCGATATCACAATCACC
ATCCTGGAAGCAGAAGATGACCGCTGGTGGGGCGACGCACCCGATTCGCA
TGATGCTCCTTGGGGAATGATGAATGTATTGGCTGGATGCATTACCGCTG
CGTCTGCAGCAATTGCTGATGCTCGAATTGACTGTCTTGACCTTGTAGCT
GGTGGTGTGGCTGCCATCGTCTCCGACGAACCAGCAGAGGGTGAATCGTC
TACCCCTAAGCTGATGCTCGATACGGACCCAGCTGAGCACAAGTCTATTC
TGTCTGCCTGTGTCGTTGCCTACATGCCCTCTAGAGATGAGATTACGGAG
TTGTGGCTCAAGGGCGATCATTCAAAGGCATCATTAGGCACTACTGATCA
GAGTCTGACCCACGAATCTCTCATTGATGGGGCAGTGAATGCAGCTCGAG
GTGCCCACACTGTCCTGGCAGAAGCTGTGAAGGAGTCTGCTGAGAGGTTT
GCTGGTTTACCGACAGGGGCAAACCTGGTGTAA back to topCoding sequence (CDS) from alignment at ch3:4491172..4492204+ >KJC3_004307-T1 ID=KJC3_004307-T1|Name=KJC3_004307-T1|organism=Aspergillus niger KJC3|type=CDS|length=1950bp|location=Sequence derived from alignment at ch3:4491172..4492204+ (Aspergillus niger KJC3)
ATGACTGACAGACGAAGAATCAATGGGCCGCCTAGCGGCACGAGGCCGGC
CGTTTTCGCCTCCTCTCTCAAGTCCGCTTCTAGCATTTCTACCGGCAGAC
CACGACGTCAAAGGCAGCCGGATGAGCTTCGCAAGATCTTTCTGAAGACA
GGTCTCATCCCTTCGGCATCTGGTTCTTCCTATCTTGAATTCGAACCCTC
CGCATCACTTGCTGCTGCACGCTCAAACCCCCAATCCCTGATTCCTCCGT
CCTCTGCATTGAAGCTTGCCTGCACAGTTCATGGCCCTAAGCCCCTGCCA
CGCTCGGCTAGCTTTTCGCCTAACGTCGTCCTTACGACACACGTCAAGTA
TGCGCCGTTTGCTGCCCGCCAGAGGAAGGGGCATATCCGCGATGCTAGCG
AACGGGACCTGGGTGTGCATTTAGAGACGGCGCTTAGAGGCGTCATTGTT
GCTGAGCGCTGGCCCAAGAGTGGCCTCGATATCACAATCACCATCCTGGA
AGCAGAAGATGACCGCTGGTGGGGCGACGCACCCGATTCGCATGATGCTC
CTTGGGGAATGATGAATGTATTGGCTGGATGCATTACCGCTGCGTCTGCA
GCAATTGCTGATGCTCGAATTGACTGTCTTGACCTTGTAGCTGGTGGTGT
GGCTGCCATCGTCTCCGACGAACCAGCAGAGGGTGAATCGTCTACCCCTA
AGCTGATGCTCGATACGGACCCAGCTGAGCACAAGTCTATTCTGTCTGCC
TGTGTCGTTGCCTACATGCCCTCTAGAGATGAGATTACGGAGTTGTGGCT
CAAGGGCGATCATTCAAAGGCATCATTAGGCACTACTGATCAGAGTCTGA
CCCACGAATCTCTCATTGATGGGGCAGTGAATGCAGCTCGAGGTGCCCAC
ACTGTCCTGGCAGAAGCTGTGAAGGAGTCTGCTGAGAGGTTTGCTGGTTT
ACCGACAGGGGCAAACCTGGTGTAAATGACTGACAGACGAAGAATCAATG
GGCCGCCTAGCGGCACGAGGCCGGCCGTTTTCGCCTCCTCTCTCAAGTCC
GCTTCTAGCATTTCTACCGGCAGACCACGACGTCAAAGGCAGCCGGATGA
GCTTCGCAAGATCTTTCTGAAGACAGGTCTCATCCCTTCGGCATCTGGTT
CTTCCTATCTTGAATTCGAACCCTCCGCATCACTTGCTGCTGCACGCTCA
AACCCCCAATCCCTGATTCCTCCGTCCTCTGCATTGAAGCTTGCCTGCAC
AGTTCATGGCCCTAAGCCCCTGCCACGCTCGGCTAGCTTTTCGCCTAACG
TCGTCCTTACGACACACGTCAAGTATGCGCCGTTTGCTGCCCGCCAGAGG
AAGGGGCATATCCGCGATGCTAGCGAACGGGACCTGGGTGTGCATTTAGA
GACGGCGCTTAGAGGCGTCATTGTTGCTGAGCGCTGGCCCAAGAGTGGCC
TCGATATCACAATCACCATCCTGGAAGCAGAAGATGACCGCTGGTGGGGC
GACGCACCCGATTCGCATGATGCTCCTTGGGGAATGATGAATGTATTGGC
TGGATGCATTACCGCTGCGTCTGCAGCAATTGCTGATGCTCGAATTGACT
GTCTTGACCTTGTAGCTGGTGGTGTGGCTGCCATCGTCTCCGACGAACCA
GCAGAGGGTGAATCGTCTACCCCTAAGCTGATGCTCGATACGGACCCAGC
TGAGCACAAGTCTATTCTGTCTGCCTGTGTCGTTGCCTACATGCCCTCTA
GAGATGAGATTACGGAGTTGTGGCTCAAGGGCGATCATTCAAAGGCATCA
TTAGGCACTACTGATCAGAGTCTGACCCACGAATCTCTCATTGATGGGGC
AGTGAATGCAGCTCGAGGTGCCCACACTGTCCTGGCAGAAGCTGTGAAGG
AGTCTGCTGAGAGGTTTGCTGGTTTACCGACAGGGGCAAACCTGGTGTAA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR020568 |
| DBxref | InterPro:IPR001247 |
| DBxref | PFAM:PF01138 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch3 | supercontig | ch3:4491172..4492204 + |
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