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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch3:4495643..4499124+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_004309-T1 ID=KJC3_004309-T1|Name=KJC3_004309-T1|organism=Aspergillus niger KJC3|type=mRNA|length=3482bp|location=Sequence derived from alignment at ch3:4495643..4499124+ (Aspergillus niger KJC3)
GTCTGGATCTTTTGCTAATATTGGCATGATGGCGGTACTAGCTCAACTGC
ACGTCGTGCAGATCCAATTTCGACGCCCTCGCTGTCAGGTGGACTCGGGA
TTCTAGGTTTATGCATAGTGGGTTTTTGAGGACGTTAGGGCTTTGCTCTG
CTGCACGTTCGACACAGTCACCAGTCAGCGCAGCAGCTTCAATTGTGTGC
TGGGCACTGGCCGCTGCGATTCCACAATGGCCACGAGGAGGGGGTCCCTG
TAATCCGTATAAGCACTTCAGACCGCGCCATTCGACTAGGGCAGACAGCT
ATCTCGGTGCCATGGTCTTCGAGTGTGACCGGCGCAATGTGCATCTAGCT
CGCAATTTCTTTTCACTGGTCCCCTCCCGTCCGCCGGCTCAGCCCCATCT
TGTGTTGATGGATTACGGAGACCTGGACCACTTCTACCCCTGATACAGGC
AGGAACAATTATCGGATCTGCGAACCGGGCAGCTATCCTACGTAGACGAT
CCATCCTTTGTTCATCGACGCTGCTTTTCTCTCTTCTCAGCTTCTCCTCC
CTCCCTCCCTTCCTCCATCTCTCTCTCTCTCTCTCTCCCCCGTTATTCTT
CCCTCCCATCACTCCTTCATCTTCTCGAGTACGGAGGGCTTTTGCGTTCA
GCGACTTCGATATGAGTTAGACGTTATCATGACAGCAGCTCCAGATTACA
TTCCTTTTCTACAGTTCTCTTTTCCGATCTGATCGTCATTGTCATCCCTC
GGAAAGCTCGTATTTCTAGCATCCGCCAGTCTCGTCGCACCGATATCATA
AGCATATCTTTGCACGCACTTGAGCGTTGTCACGCGCATAATATCTAGAT
CAGGCTATCCATATGGTTCAGCTGCAGCTGTTGACACCAACATGGTTGCC
TTAAAGCGCTTCTTCCATGCGGAGAAATCTTCACCGGCAAACTTCGACGG
TCATGACGCTCGAGCAGTCAGCCCAGGAGGCGATGATCACCACGTTTTGC
CCAACGTGAAGACATCCCGGCGCATGGCCGCGGAAAATCAGTGTGAAGTA
ACGCACAACCAGATGCAGTCGAGACCCTTGTCAGCTCGTTCGCATGCGCC
TCCGTCTCGGGCATCGACTCGTCCTCCAGTCCCAGCATCTCGGCACGTTG
ATCTGCTCGATGCTTTGTTTTCTTCACACCGGTATCACATCCAAAGCGCC
AGCACTTTGTCGCCGATTACACCATACAATGAAGACATAGCCGAACGGAA
CATGGTGCCCTTCTTGAGAGGACTGGCGCTCAAGAATACCTACTGCTCGC
GTCCGGTTTCAACTCTGTATCAGGAAGAGGTAGCAGACCGGAATATCTCG
AGTAGAAGCAGCAGTCGCTCCATTCCCCACAGTTTCAGCGCACGCTCTCG
GGCTACACCACCTCGTTCCAGGCAGGGATCACAGAGGTATGTAGACAATG
CTAGGGATCGCCCCCATTCACGGGCGAAAGGCACGCTGCTGGAGCGGTCT
ATTTCTCCTGAGAGCTCAGTCTCTGTACCTCAATTGCGTACTGAGGAGCG
CCCTGGCTCTTCCAGGGAAGGGGCCTTTCAGAGAAGCTCCCTGCGATCTC
AGAGGTCTGCGCCTGACTTGCTAGCTGAATGGAACAATGCGCCGGAGGAA
GAAGCCGTCTCCCGTTCGAATGGATACTTGGGCGTCCCTCCTGCTCACAA
GCAAGGCGATAAATGGAGCAATACGCCGCTACCTGATAGCCCAACGCTCC
CATTATCCATGAGCAGTGACGGTATGAGCGAGACTGAATCCCCTCCGGAT
ACACAGAGTACCCCTCCAGCGTCCGCTCGTCATGGCAACAAAAAGAATAT
CCGAGATCTTTCTATAAACACGAAGATAGCAGCTCGAGGAAGCCCGAGCA
CGAAGATTGCACATCGGGCAATACAGCCGCCTACTCCCAGTGCTGTCGAT
CCTAAGCAAGCCCCTAGCATTGCGGAGGTTATGAACAGCCCTCTCCCTGT
GGGAACACCGACATCCATCTCATCCTTGCCTCAGTCCAACGACAAAGTTA
TCGAGATCATGGACATGTTCAGGCAGGCTTTTGCTTCGACCCAAGAGGTC
ACACCACACCCTACCTTTGAGAGTCTCCAGGATGCTATCATCAGGGAGAT
CAATTCTCACGAAGCCTTTCGGCGCATTTCCTTCCCCACCGAGCCCTCAC
TCACTCCTTCGCCATCTCAGGAATCCTTTGACAGAGCTCCTCATGTGCCA
TTGTGCCCAGGACCAGGTCTGGAACGAAGCCTTTCTGCAAAGGAAGGGCA
ATTCTCGAAGTTGATCCGCAAAAGCTCCTTCAAAAAGCACAAGAGAAGTC
CTGAGCAGCGCAGAAGCATATCCACGAGCGTTCCCGTAACGGCTTTCCGG
GCCTCACAGACAACCAGTCGACGGAGGCACACCGACGCTCCTCTTCCCTC
CCCAGGAGTCCTCAGTAATAGGGAGGCGAAGCAACAAAATAAGGAGAGCC
CCGAGGAGCAAGTGACCTACATGGATCTTCTCCAATCGGAAAGATTATCC
CACAATCCTCCAAGCAACCCGGGTCGTGCTGTATCCATGAGAACCAACTC
GTCCCATGGCAACTTAATGAACATGAGCGGGGCACCATCAGTCCTACGCA
TGCGCGCACAAGCCTCTCCAGTAAGAATCAGCCAGATCAGCTACTCAGAA
GACGACAGCGACGACGAAGAAATCATCCAATTGCCCAGCGTTGGTGGGAC
ACCGCACGTCTGTATCCAGGGTGTCGATCAGAACAACGTCACCTACATGG
CTAGAAACACGACTCCGCGAAACGCCTACCGGCTCATGAGCTGGCCTCGG
AAATCAGGTCCCAATGCGCACAGCAGAACCACCATTTCCAGCGAACGAGT
CCCTTCCCGAACTTCGTCCAGAAACGGACAGCAGTTCTAGGAGACCGCAT
TGGGTGCAGACTCGTTGCTGTTGCTTTCTTGCTAATGCTTCACTCTCTTG
ATACCCCTGTCTTTGACAATGATACCCCTCGCCGTGTTCCCGAAAGAAAC
TATCGTCACGTCCGCTCTCTTACAACCTATAATCCTTAATCCGTTCCTCG
CATCCCTTCATTTGATAGGATAGTCCCATCCAACATATTTTCGATCCCTA
CAACCCCATGAGTGATACCTCTTTGTCTACCCAACACAGACAGCCCAGGC
GCTCTTTCATCTCTTCTATACAAACCACAGTCCTTTTACTTTGCATACGG
CTTTCAACTTTCAGCTCTTATCCAGTCATTCCATCATTCATTCCTTATTC
TCTGCATGGATTTCGCATATTTTTTCTACACTGCATCTCTCTTTTCAAGC
GTCCTAGCGCTCACTCTTCTGTATCCTTCTCTGACTATCGAGCTGTCACA
CTCACTTGCTTTTTCCATCCATCACCAGCGAAATTACTAAGTAGACAACG
AATCCTTATCACCACCTAAAAAATAATATAAT back to topCoding sequence (CDS) from alignment at ch3:4495643..4499124+ >KJC3_004309-T1 ID=KJC3_004309-T1|Name=KJC3_004309-T1|organism=Aspergillus niger KJC3|type=CDS|length=2049bp|location=Sequence derived from alignment at ch3:4495643..4499124+ (Aspergillus niger KJC3)
ATGGTTGCCTTAAAGCGCTTCTTCCATGCGGAGAAATCTTCACCGGCAAA
CTTCGACGGTCATGACGCTCGAGCAGTCAGCCCAGGAGGCGATGATCACC
ACGTTTTGCCCAACGTGAAGACATCCCGGCGCATGGCCGCGGAAAATCAG
TGTGAAGTAACGCACAACCAGATGCAGTCGAGACCCTTGTCAGCTCGTTC
GCATGCGCCTCCGTCTCGGGCATCGACTCGTCCTCCAGTCCCAGCATCTC
GGCACGTTGATCTGCTCGATGCTTTGTTTTCTTCACACCGGTATCACATC
CAAAGCGCCAGCACTTTGTCGCCGATTACACCATACAATGAAGACATAGC
CGAACGGAACATGGTGCCCTTCTTGAGAGGACTGGCGCTCAAGAATACCT
ACTGCTCGCGTCCGGTTTCAACTCTGTATCAGGAAGAGGTAGCAGACCGG
AATATCTCGAGTAGAAGCAGCAGTCGCTCCATTCCCCACAGTTTCAGCGC
ACGCTCTCGGGCTACACCACCTCGTTCCAGGCAGGGATCACAGAGGTATG
TAGACAATGCTAGGGATCGCCCCCATTCACGGGCGAAAGGCACGCTGCTG
GAGCGGTCTATTTCTCCTGAGAGCTCAGTCTCTGTACCTCAATTGCGTAC
TGAGGAGCGCCCTGGCTCTTCCAGGGAAGGGGCCTTTCAGAGAAGCTCCC
TGCGATCTCAGAGGTCTGCGCCTGACTTGCTAGCTGAATGGAACAATGCG
CCGGAGGAAGAAGCCGTCTCCCGTTCGAATGGATACTTGGGCGTCCCTCC
TGCTCACAAGCAAGGCGATAAATGGAGCAATACGCCGCTACCTGATAGCC
CAACGCTCCCATTATCCATGAGCAGTGACGGTATGAGCGAGACTGAATCC
CCTCCGGATACACAGAGTACCCCTCCAGCGTCCGCTCGTCATGGCAACAA
AAAGAATATCCGAGATCTTTCTATAAACACGAAGATAGCAGCTCGAGGAA
GCCCGAGCACGAAGATTGCACATCGGGCAATACAGCCGCCTACTCCCAGT
GCTGTCGATCCTAAGCAAGCCCCTAGCATTGCGGAGGTTATGAACAGCCC
TCTCCCTGTGGGAACACCGACATCCATCTCATCCTTGCCTCAGTCCAACG
ACAAAGTTATCGAGATCATGGACATGTTCAGGCAGGCTTTTGCTTCGACC
CAAGAGGTCACACCACACCCTACCTTTGAGAGTCTCCAGGATGCTATCAT
CAGGGAGATCAATTCTCACGAAGCCTTTCGGCGCATTTCCTTCCCCACCG
AGCCCTCACTCACTCCTTCGCCATCTCAGGAATCCTTTGACAGAGCTCCT
CATGTGCCATTGTGCCCAGGACCAGGTCTGGAACGAAGCCTTTCTGCAAA
GGAAGGGCAATTCTCGAAGTTGATCCGCAAAAGCTCCTTCAAAAAGCACA
AGAGAAGTCCTGAGCAGCGCAGAAGCATATCCACGAGCGTTCCCGTAACG
GCTTTCCGGGCCTCACAGACAACCAGTCGACGGAGGCACACCGACGCTCC
TCTTCCCTCCCCAGGAGTCCTCAGTAATAGGGAGGCGAAGCAACAAAATA
AGGAGAGCCCCGAGGAGCAAGTGACCTACATGGATCTTCTCCAATCGGAA
AGATTATCCCACAATCCTCCAAGCAACCCGGGTCGTGCTGTATCCATGAG
AACCAACTCGTCCCATGGCAACTTAATGAACATGAGCGGGGCACCATCAG
TCCTACGCATGCGCGCACAAGCCTCTCCAGTAAGAATCAGCCAGATCAGC
TACTCAGAAGACGACAGCGACGACGAAGAAATCATCCAATTGCCCAGCGT
TGGTGGGACACCGCACGTCTGTATCCAGGGTGTCGATCAGAACAACGTCA
CCTACATGGCTAGAAACACGACTCCGCGAAACGCCTACCGGCTCATGAGC
TGGCCTCGGAAATCAGGTCCCAATGCGCACAGCAGAACCACCATTTCCAG
CGAACGAGTCCCTTCCCGAACTTCGTCCAGAAACGGACAGCAGTTCTAG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_004309-T1.utr5p1 | KJC3_004309-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_004309-T1.utr3p1 | KJC3_004309-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch3 | supercontig | ch3:4495643..4499124 + |
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