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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch3:4527871..4530401+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_004319-T1 ID=KJC3_004319-T1|Name=KJC3_004319-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2531bp|location=Sequence derived from alignment at ch3:4527871..4530401+ (Aspergillus niger KJC3)
CCTCTGCGTGTTTCTCTAATCTATACTGTATCAGACTCATCGAGAAACCT
TCTGACGCTGTTCTGGAAAAAGCTGTCTTGCTAGCCATTTCTAATTCGGG
CCTTTCTGGTGGATGCATTGTTTACGTGTATTACTACTAATTGCTCCACC
CGGTCCCGCGTCGATCTATTCGCGGTTCGATCAACAATACTACTTCTAGT
AATTTCTCTATCTATATCAATAGCCAAGGAGGTCCGAACTCACGGCGTCT
CAATCTTGCATTGGATGCATTAGATGCATCAGGCTCTGTTCTACCGTGGC
ATCACTATGCATTGTGCGACATAACGTAATTTTACACCATGTCAGGCGGC
TATGCCTCCCGGTTCGTGGATGTGTCCACCGCACTCTCTACGCAGGGCAA
AGTAAGTGTCATTGGCGTCGTAGTCGACGTCTTCGGCGGAATATGGAAGT
CTAGAGGCTCGTCCAGCTGTATTACCTTCACCATCAAGGACTCAGGTCTT
GACAACGGACATACATGGGACGGGTTGAAAATCAAATATTTCAAAGACAA
TGAGAGCCATTTACCTCCCGTCCAACTACGCGACGTGATCCTGATACGAG
ATCTGTGGGTTCGTGAGGCAAGACTTGACCCCTTCCTCGGTGACAGACTG
ACGCTTTGACTGCAGATAAGGAACTTCAAAGGAGACCCGTTGGGAGTCGC
TGCCCAGGACAGAGAAGTACCATGGGCAATCTTTCGCCTGGACCCGGATC
CCACGTCTAGCCCTGCGCCCCTTTGTGGCCCTACGCACTTTGAGCCATCT
CCTTCAGAGAAGATACATGCTTTGAATTTGTTGAATAGCCTCACTGCAGT
CGATGGTTTTCGCAAAGCTCCAGCACAAGATACTCCACGTGGCTCCTATA
TTGTCCAGGCTGCAATTCCAAATTCCAAACCTTACCCGCACAAGAGGCTT
TCTCTTGTCAAGGATATTGTAGAGCGAAATTATGTTGACCTCGTGGGGCA
AATTGTCAAGGTCTATACCAACGACAGTGAAAAGGTCGTCCTCTATTTCA
CCGATTACACGGCCAACGATGGTCTCGAAGACCGCCAAATAAACGATGCC
GGTGACAATGACTTTGGCACTGAAGGAGATATCTACGGTTACCAAAAACG
ACCCAAGAAGAAATGGACAGGACCAGTTGGACGGATGACCCTCACAATCA
CACTCTGGGAACCCCATGCATCCTATGCGCGCCAACATCTGAAGGATAAC
GATCTCATCCAGCTATACAATGTGCATGTCAAGCGCAGTCGCATCAATGG
GATATTAGAAGCCAGTATCCACACAAACCGCACGAATCCAAATTCAGTCA
ATGTACACACCCTGGATCGTCGCAAAGACACGTTTGTCGAACAATTTCTG
CAGCGTAAGACGGAATACTGGAAAGCGAATCCTCGGAAGCGGGAACTCGA
AAACGAAGGCCAGCAGGTTTCGAAGAAAAGCACCAAGAAACAGCGAAAGA
AAGCCGAAAAGGTGGAAGAAGGCCAAGTTCCCATAATAGCAGCAAGCAGC
AAGCGATATGCGCCAAATGAAAACAGTAAGTCATGCCGTCTTAGTAATAA
CCACTGGGGCATCTTACAGTTGATTGACAGTCTATGATAGTCATAGCAGG
CAGCCCGTCCGTCCCTACAATGTCCCTGGAAGCGATCCTTTCCAACAAAC
TTCATGACAACATCTCATATGACAACATACAGTACCGCTTCCCCTTTCAA
AACTTCTGCTACCGAACCACAGTCCGTGTGGTCGATTTCTTCCCCCCACG
ACTGGAAGACTTCTCCGTCCCCGAAGACTCCTCGGGTGAGGGTACCTCTC
AAAGAGATCCCGATCGTTTCATTAGATGGGAATGGCGCTTCTGTCTGCTC
GTGGAGAGCGTCCCTCCTCCACCCGCAGGTCAAGCGAAAGAACAGATGAG
GTTGTTTGTAGCTGGCCCAAATGCAGAGTATCTATTAGGGCTGACTGCAG
TTGAGTAAGTCATCTCGGCTCCCTCACATATCGACACTAAGATCGCCGTG
AGGTCGATTATCTAACCATAACTCTTCCTATGTCCATTAGTCTAAGACAA
AACCAAACCGATCTGAAAGAACTCCGAGAAAAGCTCTTCATCTTATGGGG
AGACCTCGAGGAGCGCAAAAGAGCGGCCCTACACGATGGCAAACAGGACC
TCGGCCCAGTTTCATGCAGGCCTTTCAATTGCTGCATTCAAGAGTATGGT
GTTCTTTGCAGACATCGTTCTGATACTGAGAACACCAACACTAATAATGA
AGATGATGAGAATGGCTGTAGCCATGATGACTGCTTTGGATGGGAGAGGC
GCTTTTCTATGTTCCTTACTACTATTTCCTAATACATTGTTGCAAAGCGG
CTTCTGGGAGTATGTGATGTTGTCTGCTTTTGTATACATAGGGGATTTTG
TTTTGCTTTTGGCGCCATGGTCATCGGAGGACTCGAGTCTTGGGGTCACT
TGTATACAAATTTGAAAGATTTCTGCTCCCA back to topCoding sequence (CDS) from alignment at ch3:4527871..4530401+ >KJC3_004319-T1 ID=KJC3_004319-T1|Name=KJC3_004319-T1|organism=Aspergillus niger KJC3|type=CDS|length=7344bp|location=Sequence derived from alignment at ch3:4527871..4530401+ (Aspergillus niger KJC3)
ATGTCAGGCGGCTATGCCTCCCGGTTCGTGGATGTGTCCACCGCACTCTC
TACGCAGGGCAAAGTAAGTGTCATTGGCGTCGTAGTCGACGTCTTCGGCG
GAATATGGAAGTCTAGAGGCTCGTCCAGCTGTATTACCTTCACCATCAAG
GACTCAGGTCTTGACAACGGACATACATGGGACGGGTTGAAAATCAAATA
TTTCAAAGACAATGAGAGCCATTTACCTCCCGTCCAACTACGCGACGTGA
TCCTGATACGAGATCTGTGGATAAGGAACTTCAAAGGAGACCCGTTGGGA
GTCGCTGCCCAGGACAGAGAAGTACCATGGGCAATCTTTCGCCTGGACCC
GGATCCCACGTCTAGCCCTGCGCCCCTTTGTGGCCCTACGCACTTTGAGC
CATCTCCTTCAGAGAAGATACATGCTTTGAATTTGTTGAATAGCCTCACT
GCAGTCGATGGTTTTCGCAAAGCTCCAGCACAAGATACTCCACGTGGCTC
CTATATTGTCCAGGCTGCAATTCCAAATTCCAAACCTTACCCGCACAAGA
GGCTTTCTCTTGTCAAGGATATTGTAGAGCGAAATTATGTTGACCTCGTG
GGGCAAATTGTCAAGGTCTATACCAACGACAGTGAAAAGGTCGTCCTCTA
TTTCACCGATTACACGGCCAACGATGGTCTCGAAGACCGCCAAATAAACG
ATGCCGGTGACAATGACTTTGGCACTGAAGGAGATATCTACGGTTACCAA
AAACGACCCAAGAAGAAATGGACAGGACCAGTTGGACGGATGACCCTCAC
AATCACACTCTGGGAACCCCATGCATCCTATGCGCGCCAACATCTGAAGG
ATAACGATCTCATCCAGCTATACAATGTGCATGTCAAGCGCAGTCGCATC
AATGGGATATTAGAAGCCAGTATCCACACAAACCGCACGAATCCAAATTC
AGTCAATGTACACACCCTGGATCGTCGCAAAGACACGTTTGTCGAACAAT
TTCTGCAGCGTAAGACGGAATACTGGAAAGCGAATCCTCGGAAGCGGGAA
CTCGAAAACGAAGGCCAGCAGGTTTCGAAGAAAAGCACCAAGAAACAGCG
AAAGAAAGCCGAAAAGGTGGAAGAAGGCCAAGTTCCCATAATAGCAGCAA
GCAGCAAGCGATATGCGCCAAATGAAAACATCATAGCAGGCAGCCCGTCC
GTCCCTACAATGTCCCTGGAAGCGATCCTTTCCAACAAACTTCATGACAA
CATCTCATATGACAACATACAGTACCGCTTCCCCTTTCAAAACTTCTGCT
ACCGAACCACAGTCCGTGTGGTCGATTTCTTCCCCCCACGACTGGAAGAC
TTCTCCGTCCCCGAAGACTCCTCGGGTGAGGGTACCTCTCAAAGAGATCC
CGATCGTTTCATTAGATGGGAATGGCGCTTCTGTCTGCTCGTGGAGAGCG
TCCCTCCTCCACCCGCAGGTCAAGCGAAAGAACAGATGAGGTTGTTTGTA
GCTGGCCCAAATGCAGAGTATCTATTAGGGCTGACTGCAGTTGATCTAAG
ACAAAACCAAACCGATCTGAAAGAACTCCGAGAAAAGCTCTTCATCTTAT
GGGGAGACCTCGAGGAGCGCAAAAGAGCGGCCCTACACGATGGCAAACAG
GACCTCGGCCCAGTTTCATGCAGGCCTTTCAATTGCTGCATTCAAGAGTA
TGGTGTTCTTTGCAGACATCGTTCTGATACTGAGAACACCAACACTAATA
ATGAAGATGATGAGAATGGCTGTAGCCATGATGACTGCTTTGGATGGGAG
AGGCGCTTTTCTATGTTCCTTACTACTATTTCCTAAATGTCAGGCGGCTA
TGCCTCCCGGTTCGTGGATGTGTCCACCGCACTCTCTACGCAGGGCAAAG
TAAGTGTCATTGGCGTCGTAGTCGACGTCTTCGGCGGAATATGGAAGTCT
AGAGGCTCGTCCAGCTGTATTACCTTCACCATCAAGGACTCAGGTCTTGA
CAACGGACATACATGGGACGGGTTGAAAATCAAATATTTCAAAGACAATG
AGAGCCATTTACCTCCCGTCCAACTACGCGACGTGATCCTGATACGAGAT
CTGTGGATAAGGAACTTCAAAGGAGACCCGTTGGGAGTCGCTGCCCAGGA
CAGAGAAGTACCATGGGCAATCTTTCGCCTGGACCCGGATCCCACGTCTA
GCCCTGCGCCCCTTTGTGGCCCTACGCACTTTGAGCCATCTCCTTCAGAG
AAGATACATGCTTTGAATTTGTTGAATAGCCTCACTGCAGTCGATGGTTT
TCGCAAAGCTCCAGCACAAGATACTCCACGTGGCTCCTATATTGTCCAGG
CTGCAATTCCAAATTCCAAACCTTACCCGCACAAGAGGCTTTCTCTTGTC
AAGGATATTGTAGAGCGAAATTATGTTGACCTCGTGGGGCAAATTGTCAA
GGTCTATACCAACGACAGTGAAAAGGTCGTCCTCTATTTCACCGATTACA
CGGCCAACGATGGTCTCGAAGACCGCCAAATAAACGATGCCGGTGACAAT
GACTTTGGCACTGAAGGAGATATCTACGGTTACCAAAAACGACCCAAGAA
GAAATGGACAGGACCAGTTGGACGGATGACCCTCACAATCACACTCTGGG
AACCCCATGCATCCTATGCGCGCCAACATCTGAAGGATAACGATCTCATC
CAGCTATACAATGTGCATGTCAAGCGCAGTCGCATCAATGGGATATTAGA
AGCCAGTATCCACACAAACCGCACGAATCCAAATTCAGTCAATGTACACA
CCCTGGATCGTCGCAAAGACACGTTTGTCGAACAATTTCTGCAGCGTAAG
ACGGAATACTGGAAAGCGAATCCTCGGAAGCGGGAACTCGAAAACGAAGG
CCAGCAGGTTTCGAAGAAAAGCACCAAGAAACAGCGAAAGAAAGCCGAAA
AGGTGGAAGAAGGCCAAGTTCCCATAATAGCAGCAAGCAGCAAGCGATAT
GCGCCAAATGAAAACATCATAGCAGGCAGCCCGTCCGTCCCTACAATGTC
CCTGGAAGCGATCCTTTCCAACAAACTTCATGACAACATCTCATATGACA
ACATACAGTACCGCTTCCCCTTTCAAAACTTCTGCTACCGAACCACAGTC
CGTGTGGTCGATTTCTTCCCCCCACGACTGGAAGACTTCTCCGTCCCCGA
AGACTCCTCGGGTGAGGGTACCTCTCAAAGAGATCCCGATCGTTTCATTA
GATGGGAATGGCGCTTCTGTCTGCTCGTGGAGAGCGTCCCTCCTCCACCC
GCAGGTCAAGCGAAAGAACAGATGAGGTTGTTTGTAGCTGGCCCAAATGC
AGAGTATCTATTAGGGCTGACTGCAGTTGATCTAAGACAAAACCAAACCG
ATCTGAAAGAACTCCGAGAAAAGCTCTTCATCTTATGGGGAGACCTCGAG
GAGCGCAAAAGAGCGGCCCTACACGATGGCAAACAGGACCTCGGCCCAGT
TTCATGCAGGCCTTTCAATTGCTGCATTCAAGAGTATGGTGTTCTTTGCA
GACATCGTTCTGATACTGAGAACACCAACACTAATAATGAAGATGATGAG
AATGGCTGTAGCCATGATGACTGCTTTGGATGGGAGAGGCGCTTTTCTAT
GTTCCTTACTACTATTTCCTAAATGTCAGGCGGCTATGCCTCCCGGTTCG
TGGATGTGTCCACCGCACTCTCTACGCAGGGCAAAGTAAGTGTCATTGGC
GTCGTAGTCGACGTCTTCGGCGGAATATGGAAGTCTAGAGGCTCGTCCAG
CTGTATTACCTTCACCATCAAGGACTCAGGTCTTGACAACGGACATACAT
GGGACGGGTTGAAAATCAAATATTTCAAAGACAATGAGAGCCATTTACCT
CCCGTCCAACTACGCGACGTGATCCTGATACGAGATCTGTGGATAAGGAA
CTTCAAAGGAGACCCGTTGGGAGTCGCTGCCCAGGACAGAGAAGTACCAT
GGGCAATCTTTCGCCTGGACCCGGATCCCACGTCTAGCCCTGCGCCCCTT
TGTGGCCCTACGCACTTTGAGCCATCTCCTTCAGAGAAGATACATGCTTT
GAATTTGTTGAATAGCCTCACTGCAGTCGATGGTTTTCGCAAAGCTCCAG
CACAAGATACTCCACGTGGCTCCTATATTGTCCAGGCTGCAATTCCAAAT
TCCAAACCTTACCCGCACAAGAGGCTTTCTCTTGTCAAGGATATTGTAGA
GCGAAATTATGTTGACCTCGTGGGGCAAATTGTCAAGGTCTATACCAACG
ACAGTGAAAAGGTCGTCCTCTATTTCACCGATTACACGGCCAACGATGGT
CTCGAAGACCGCCAAATAAACGATGCCGGTGACAATGACTTTGGCACTGA
AGGAGATATCTACGGTTACCAAAAACGACCCAAGAAGAAATGGACAGGAC
CAGTTGGACGGATGACCCTCACAATCACACTCTGGGAACCCCATGCATCC
TATGCGCGCCAACATCTGAAGGATAACGATCTCATCCAGCTATACAATGT
GCATGTCAAGCGCAGTCGCATCAATGGGATATTAGAAGCCAGTATCCACA
CAAACCGCACGAATCCAAATTCAGTCAATGTACACACCCTGGATCGTCGC
AAAGACACGTTTGTCGAACAATTTCTGCAGCGTAAGACGGAATACTGGAA
AGCGAATCCTCGGAAGCGGGAACTCGAAAACGAAGGCCAGCAGGTTTCGA
AGAAAAGCACCAAGAAACAGCGAAAGAAAGCCGAAAAGGTGGAAGAAGGC
CAAGTTCCCATAATAGCAGCAAGCAGCAAGCGATATGCGCCAAATGAAAA
CATCATAGCAGGCAGCCCGTCCGTCCCTACAATGTCCCTGGAAGCGATCC
TTTCCAACAAACTTCATGACAACATCTCATATGACAACATACAGTACCGC
TTCCCCTTTCAAAACTTCTGCTACCGAACCACAGTCCGTGTGGTCGATTT
CTTCCCCCCACGACTGGAAGACTTCTCCGTCCCCGAAGACTCCTCGGGTG
AGGGTACCTCTCAAAGAGATCCCGATCGTTTCATTAGATGGGAATGGCGC
TTCTGTCTGCTCGTGGAGAGCGTCCCTCCTCCACCCGCAGGTCAAGCGAA
AGAACAGATGAGGTTGTTTGTAGCTGGCCCAAATGCAGAGTATCTATTAG
GGCTGACTGCAGTTGATCTAAGACAAAACCAAACCGATCTGAAAGAACTC
CGAGAAAAGCTCTTCATCTTATGGGGAGACCTCGAGGAGCGCAAAAGAGC
GGCCCTACACGATGGCAAACAGGACCTCGGCCCAGTTTCATGCAGGCCTT
TCAATTGCTGCATTCAAGAGTATGGTGTTCTTTGCAGACATCGTTCTGAT
ACTGAGAACACCAACACTAATAATGAAGATGATGAGAATGGCTGTAGCCA
TGATGACTGCTTTGGATGGGAGAGGCGCTTTTCTATGTTCCTTACTACTA
TTTCCTAAATGTCAGGCGGCTATGCCTCCCGGTTCGTGGATGTGTCCACC
GCACTCTCTACGCAGGGCAAAGTAAGTGTCATTGGCGTCGTAGTCGACGT
CTTCGGCGGAATATGGAAGTCTAGAGGCTCGTCCAGCTGTATTACCTTCA
CCATCAAGGACTCAGGTCTTGACAACGGACATACATGGGACGGGTTGAAA
ATCAAATATTTCAAAGACAATGAGAGCCATTTACCTCCCGTCCAACTACG
CGACGTGATCCTGATACGAGATCTGTGGATAAGGAACTTCAAAGGAGACC
CGTTGGGAGTCGCTGCCCAGGACAGAGAAGTACCATGGGCAATCTTTCGC
CTGGACCCGGATCCCACGTCTAGCCCTGCGCCCCTTTGTGGCCCTACGCA
CTTTGAGCCATCTCCTTCAGAGAAGATACATGCTTTGAATTTGTTGAATA
GCCTCACTGCAGTCGATGGTTTTCGCAAAGCTCCAGCACAAGATACTCCA
CGTGGCTCCTATATTGTCCAGGCTGCAATTCCAAATTCCAAACCTTACCC
GCACAAGAGGCTTTCTCTTGTCAAGGATATTGTAGAGCGAAATTATGTTG
ACCTCGTGGGGCAAATTGTCAAGGTCTATACCAACGACAGTGAAAAGGTC
GTCCTCTATTTCACCGATTACACGGCCAACGATGGTCTCGAAGACCGCCA
AATAAACGATGCCGGTGACAATGACTTTGGCACTGAAGGAGATATCTACG
GTTACCAAAAACGACCCAAGAAGAAATGGACAGGACCAGTTGGACGGATG
ACCCTCACAATCACACTCTGGGAACCCCATGCATCCTATGCGCGCCAACA
TCTGAAGGATAACGATCTCATCCAGCTATACAATGTGCATGTCAAGCGCA
GTCGCATCAATGGGATATTAGAAGCCAGTATCCACACAAACCGCACGAAT
CCAAATTCAGTCAATGTACACACCCTGGATCGTCGCAAAGACACGTTTGT
CGAACAATTTCTGCAGCGTAAGACGGAATACTGGAAAGCGAATCCTCGGA
AGCGGGAACTCGAAAACGAAGGCCAGCAGGTTTCGAAGAAAAGCACCAAG
AAACAGCGAAAGAAAGCCGAAAAGGTGGAAGAAGGCCAAGTTCCCATAAT
AGCAGCAAGCAGCAAGCGATATGCGCCAAATGAAAACATCATAGCAGGCA
GCCCGTCCGTCCCTACAATGTCCCTGGAAGCGATCCTTTCCAACAAACTT
CATGACAACATCTCATATGACAACATACAGTACCGCTTCCCCTTTCAAAA
CTTCTGCTACCGAACCACAGTCCGTGTGGTCGATTTCTTCCCCCCACGAC
TGGAAGACTTCTCCGTCCCCGAAGACTCCTCGGGTGAGGGTACCTCTCAA
AGAGATCCCGATCGTTTCATTAGATGGGAATGGCGCTTCTGTCTGCTCGT
GGAGAGCGTCCCTCCTCCACCCGCAGGTCAAGCGAAAGAACAGATGAGGT
TGTTTGTAGCTGGCCCAAATGCAGAGTATCTATTAGGGCTGACTGCAGTT
GATCTAAGACAAAACCAAACCGATCTGAAAGAACTCCGAGAAAAGCTCTT
CATCTTATGGGGAGACCTCGAGGAGCGCAAAAGAGCGGCCCTACACGATG
GCAAACAGGACCTCGGCCCAGTTTCATGCAGGCCTTTCAATTGCTGCATT
CAAGAGTATGGTGTTCTTTGCAGACATCGTTCTGATACTGAGAACACCAA
CACTAATAATGAAGATGATGAGAATGGCTGTAGCCATGATGACTGCTTTG
GATGGGAGAGGCGCTTTTCTATGTTCCTTACTACTATTTCCTAA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0000784 | nuclear chromosome, telomeric region |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0043047 | single-stranded telomeric DNA binding |
| GO:0003677 | DNA binding |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0000723 | telomere maintenance |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_004319-T1.utr5p1 | KJC3_004319-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_004319-T1.utr3p1 | KJC3_004319-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR012340 |
| DBxref | InterPro:IPR032042 |
| DBxref | InterPro:IPR011564 |
| DBxref | PFAM:PF16686 |
| DBxref | PFAM:PF02765 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch3 | supercontig | ch3:4527871..4530401 + |
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