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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch3:4530526..4532654- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_004320-T1 ID=KJC3_004320-T1|Name=KJC3_004320-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2129bp|location=Sequence derived from alignment at ch3:4530526..4532654- (Aspergillus niger KJC3)
CCCAGTTCACCTGTCTCTGTAGATCTTGCACTCTCTTCGTGATTGTACAG
TAAACTCAGTCCCGATAGTATTGACTCCCCGCAGTCTGCCCAATCTACTA
TTCTTTTTGGCTCCATAATCTCGATTGCCGCCGTCTCTGCCGCCCACCAT
CACCCTCCCCATTCTCGGTGCTTCTATAGCCTTGAGCTTCCCAAGATCGC
TCTCTCACTTCCCTCCTCTAAGTCCCTTAGTGCTCGAACCTTATCTAGTT
CATCATGACAGCGCCGGAGTATCTCGAGCGATATAAACAGCTGGCTTCTA
TAGAACAAGATAAGAATATCCTAATCGAGGTAGCCGCTCAGCATCACAGT
ATCAAGTGCTCCATGTTGACGTTACACTCCCTGCACCTAGGAACTTTTGC
AGCGTGTGACAGAGTTGGAGGCAGCCTTCCAGCAAGAGAAACTCGATCAT
GAACGTGAAACGCGGTTTAATCGTGATATCCAGCTTCATGAAATGGAGTT
AATGCAGCATATCGCGAGGATCAAGGCCATAATGGTGGGACCTTTATAGT
TCCGCAGCCTGGTCTGTGCTAACGATGCTCGTCCGCTTTTAGGACCGCGA
GCCCTTCATAGTTGTGCTACTAGATGGAACTGGCATCATCTTCAGAGATG
AATTTTTACAAAAGGGAGAAGAAGGTGGAAAGATTGCAGCCAAGAAGCTT
GCTGTCGCCCTAAAAGACTATGTTGCCAGCAATTTCCCAGGCCTTGATGC
TCCAAAGATAATCGCAAGGATGTACGTCAACTTAAAGGGCCTGAGTGAGA
TGTGTGTCCGAGGCGTCATTAGCACCGACCCATCATCAGTCGAGGGCTTT
GCTAGGGGCTTCAACAATGGCCATCCATTATTTGACCTTGTGGATACTGG
ACTGGACAACGCACATGATAAGATCGCAGGTACGCATCGAGGCTCTTGTC
CAAAGCACTTACATTGGTATTCAACTTACAACGATGCGCTGACCTACTGC
TCGCCGTCTTCAGAGGCCTTCAGGGTCAACCTATATAACTGTCACTGTCA
TCAAATCTTCTTAGGATGCGCCGACACCAGTGCATATGCCCAGATTTTGG
TGGATATAATGGAAGACATTGACCTTGTAGGAAGAGTAACCTTGATCGAG
GGCGTCACCTTTGAAAAGGACCTAGCCAAAATCAAGGCCGCATACAGAGT
CTCTCAGTTTCCGGAAATTCTCCGAAATACAAAAATAACACCTGTCTGGG
CCCCATGGAAAGCCGCAGTGGCGTCCAAACCTCCTCCCGCTCTCACCCCA
TCACCGAAACCAGGCGCAGTGCCACTGTCACGAACCTCGACTAGCACGTC
AACAAACGCCAGTACATCGCTGTCTTCCACGTCTGCAAGGCCGTCAAGCC
CTGGAGAGTTCCAAGTGGTACAGTCGAAATCAGCTACACCCGCACGGCCC
AAGATCGTTGAACGAAACAAGTACGGTCAACGTGTAGACCGAGTTGACTT
TAAAAGCATACCACGAGAAGAACTGAACCGCCTCAAGAAACTGAAATTAT
GCAACCTTCATTACCTTCTAGGAGAATGTACAGTTGATAACTGTCAGCAC
GACCACTCGCGCAAGTTGACCAAAAATGAACTTTCAATCTTGTCCGCCAT
CGCCCGCATGACCCCCTGCCGATACGGATTAGAATGCGATGATCCGGAAT
GTACATATGGGCATCGATGCCCTCATGCAGAACCCGGGAAAAGGGACTGT
TACTGGGGTTCGAATTGTCGATTTGATCCTGCCGCCCATGGCATCGACAC
CAATATCGTTAAATTAACTAAGGTCTAATACTATGGATATAATAGTTGGG
GAAGCGAACGCCATTACCTCTTTTCAAGTTTGCAGCGCGAGACAGAACCT
GCATTGCTCTAGCCACAAAAGTTGTGTTTTCCTTTGGCCTTTGTAATGAC
TTCGCGCAGATAAGATTGGACTCTCTTCACAAGTTTCTGGCCCATTAACA
TCGATATTCCTGTTTGCTGGCGTGCTTCCTACTTTTGGTTTTCCACTCCC
TCGCGTATGGTACATATATGAATATCCCTAGCTTCGTTACTTAATCTGTG
AGATTGCTATCAATATGACACTTTTGCCG back to topCoding sequence (CDS) from alignment at ch3:4530526..4532654- >KJC3_004320-T1 ID=KJC3_004320-T1|Name=KJC3_004320-T1|organism=Aspergillus niger KJC3|type=CDS|length=5484bp|location=Sequence derived from alignment at ch3:4530526..4532654- (Aspergillus niger KJC3)
AGGCCTTCAGGGTCAACCTATATAACTGTCACTGTCATCAAATCTTCTTA
GGATGCGCCGACACCAGTGCATATGCCCAGATTTTGGTGGATATAATGGA
AGACATTGACCTTGTAGGAAGAGTAACCTTGATCGAGGGCGTCACCTTTG
AAAAGGACCTAGCCAAAATCAAGGCCGCATACAGAGTCTCTCAGTTTCCG
GAAATTCTCCGAAATACAAAAATAACACCTGTCTGGGCCCCATGGAAAGC
CGCAGTGGCGTCCAAACCTCCTCCCGCTCTCACCCCATCACCGAAACCAG
GCGCAGTGCCACTGTCACGAACCTCGACTAGCACGTCAACAAACGCCAGT
ACATCGCTGTCTTCCACGTCTGCAAGGCCGTCAAGCCCTGGAGAGTTCCA
AGTGGTACAGTCGAAATCAGCTACACCCGCACGGCCCAAGATCGTTGAAC
GAAACAAGTACGGTCAACGTGTAGACCGAGTTGACTTTAAAAGCATACCA
CGAGAAGAACTGAACCGCCTCAAGAAACTGAAATTATGCAACCTTCATTA
CCTTCTAGGAGAATGTACAGTTGATAACTGTCAGCACGACCACTCGCGCA
AGTTGACCAAAAATGAACTTTCAATCTTGTCCGCCATCGCCCGCATGACC
CCCTGCCGATACGGATTAGAATGCGATGATCCGGAATGTACATATGGGCA
TCGATGCCCTCATGCAGAACCCGGGAAAAGGGACTGTTACTGGGGTTCGA
ATTGTCGATTTGATCCTGCCGCCCATGGCATCGACACCAATATCGTTAAA
TTAACTAAGGTCTAAGACCGCGAGCCCTTCATAGTTGTGCTACTAGATGG
AACTGGCATCATCTTCAGAGATGAATTTTTACAAAAGGGAGAAGAAGGTG
GAAAGATTGCAGCCAAGAAGCTTGCTGTCGCCCTAAAAGACTATGTTGCC
AGCAATTTCCCAGGCCTTGATGCTCCAAAGATAATCGCAAGGATGTACGT
CAACTTAAAGGGCCTGAGTGAGATGTGTGTCCGAGGCGTCATTAGCACCG
ACCCATCATCAGTCGAGGGCTTTGCTAGGGGCTTCAACAATGGCCATCCA
TTATTTGACCTTGTGGATACTGGACTGGACAACGCACATGATAAGATCGC
AGGAACTTTTGCAGCGTGTGACAGAGTTGGAGGCAGCCTTCCAGCAAGAG
AAACTCGATCATGAACGTGAAACGCGGTTTAATCGTGATATCCAGCTTCA
TGAAATGGAGTTAATGCAGCATATCGCGAGGATCAAGGCCATAATGATGA
CAGCGCCGGAGTATCTCGAGCGATATAAACAGCTGGCTTCTATAGAACAA
GATAAGAATATCCTAATCGAGAGGCCTTCAGGGTCAACCTATATAACTGT
CACTGTCATCAAATCTTCTTAGGATGCGCCGACACCAGTGCATATGCCCA
GATTTTGGTGGATATAATGGAAGACATTGACCTTGTAGGAAGAGTAACCT
TGATCGAGGGCGTCACCTTTGAAAAGGACCTAGCCAAAATCAAGGCCGCA
TACAGAGTCTCTCAGTTTCCGGAAATTCTCCGAAATACAAAAATAACACC
TGTCTGGGCCCCATGGAAAGCCGCAGTGGCGTCCAAACCTCCTCCCGCTC
TCACCCCATCACCGAAACCAGGCGCAGTGCCACTGTCACGAACCTCGACT
AGCACGTCAACAAACGCCAGTACATCGCTGTCTTCCACGTCTGCAAGGCC
GTCAAGCCCTGGAGAGTTCCAAGTGGTACAGTCGAAATCAGCTACACCCG
CACGGCCCAAGATCGTTGAACGAAACAAGTACGGTCAACGTGTAGACCGA
GTTGACTTTAAAAGCATACCACGAGAAGAACTGAACCGCCTCAAGAAACT
GAAATTATGCAACCTTCATTACCTTCTAGGAGAATGTACAGTTGATAACT
GTCAGCACGACCACTCGCGCAAGTTGACCAAAAATGAACTTTCAATCTTG
TCCGCCATCGCCCGCATGACCCCCTGCCGATACGGATTAGAATGCGATGA
TCCGGAATGTACATATGGGCATCGATGCCCTCATGCAGAACCCGGGAAAA
GGGACTGTTACTGGGGTTCGAATTGTCGATTTGATCCTGCCGCCCATGGC
ATCGACACCAATATCGTTAAATTAACTAAGGTCTAAGACCGCGAGCCCTT
CATAGTTGTGCTACTAGATGGAACTGGCATCATCTTCAGAGATGAATTTT
TACAAAAGGGAGAAGAAGGTGGAAAGATTGCAGCCAAGAAGCTTGCTGTC
GCCCTAAAAGACTATGTTGCCAGCAATTTCCCAGGCCTTGATGCTCCAAA
GATAATCGCAAGGATGTACGTCAACTTAAAGGGCCTGAGTGAGATGTGTG
TCCGAGGCGTCATTAGCACCGACCCATCATCAGTCGAGGGCTTTGCTAGG
GGCTTCAACAATGGCCATCCATTATTTGACCTTGTGGATACTGGACTGGA
CAACGCACATGATAAGATCGCAGGAACTTTTGCAGCGTGTGACAGAGTTG
GAGGCAGCCTTCCAGCAAGAGAAACTCGATCATGAACGTGAAACGCGGTT
TAATCGTGATATCCAGCTTCATGAAATGGAGTTAATGCAGCATATCGCGA
GGATCAAGGCCATAATGATGACAGCGCCGGAGTATCTCGAGCGATATAAA
CAGCTGGCTTCTATAGAACAAGATAAGAATATCCTAATCGAGAGGCCTTC
AGGGTCAACCTATATAACTGTCACTGTCATCAAATCTTCTTAGGATGCGC
CGACACCAGTGCATATGCCCAGATTTTGGTGGATATAATGGAAGACATTG
ACCTTGTAGGAAGAGTAACCTTGATCGAGGGCGTCACCTTTGAAAAGGAC
CTAGCCAAAATCAAGGCCGCATACAGAGTCTCTCAGTTTCCGGAAATTCT
CCGAAATACAAAAATAACACCTGTCTGGGCCCCATGGAAAGCCGCAGTGG
CGTCCAAACCTCCTCCCGCTCTCACCCCATCACCGAAACCAGGCGCAGTG
CCACTGTCACGAACCTCGACTAGCACGTCAACAAACGCCAGTACATCGCT
GTCTTCCACGTCTGCAAGGCCGTCAAGCCCTGGAGAGTTCCAAGTGGTAC
AGTCGAAATCAGCTACACCCGCACGGCCCAAGATCGTTGAACGAAACAAG
TACGGTCAACGTGTAGACCGAGTTGACTTTAAAAGCATACCACGAGAAGA
ACTGAACCGCCTCAAGAAACTGAAATTATGCAACCTTCATTACCTTCTAG
GAGAATGTACAGTTGATAACTGTCAGCACGACCACTCGCGCAAGTTGACC
AAAAATGAACTTTCAATCTTGTCCGCCATCGCCCGCATGACCCCCTGCCG
ATACGGATTAGAATGCGATGATCCGGAATGTACATATGGGCATCGATGCC
CTCATGCAGAACCCGGGAAAAGGGACTGTTACTGGGGTTCGAATTGTCGA
TTTGATCCTGCCGCCCATGGCATCGACACCAATATCGTTAAATTAACTAA
GGTCTAAGACCGCGAGCCCTTCATAGTTGTGCTACTAGATGGAACTGGCA
TCATCTTCAGAGATGAATTTTTACAAAAGGGAGAAGAAGGTGGAAAGATT
GCAGCCAAGAAGCTTGCTGTCGCCCTAAAAGACTATGTTGCCAGCAATTT
CCCAGGCCTTGATGCTCCAAAGATAATCGCAAGGATGTACGTCAACTTAA
AGGGCCTGAGTGAGATGTGTGTCCGAGGCGTCATTAGCACCGACCCATCA
TCAGTCGAGGGCTTTGCTAGGGGCTTCAACAATGGCCATCCATTATTTGA
CCTTGTGGATACTGGACTGGACAACGCACATGATAAGATCGCAGGAACTT
TTGCAGCGTGTGACAGAGTTGGAGGCAGCCTTCCAGCAAGAGAAACTCGA
TCATGAACGTGAAACGCGGTTTAATCGTGATATCCAGCTTCATGAAATGG
AGTTAATGCAGCATATCGCGAGGATCAAGGCCATAATGATGACAGCGCCG
GAGTATCTCGAGCGATATAAACAGCTGGCTTCTATAGAACAAGATAAGAA
TATCCTAATCGAGAGGCCTTCAGGGTCAACCTATATAACTGTCACTGTCA
TCAAATCTTCTTAGGATGCGCCGACACCAGTGCATATGCCCAGATTTTGG
TGGATATAATGGAAGACATTGACCTTGTAGGAAGAGTAACCTTGATCGAG
GGCGTCACCTTTGAAAAGGACCTAGCCAAAATCAAGGCCGCATACAGAGT
CTCTCAGTTTCCGGAAATTCTCCGAAATACAAAAATAACACCTGTCTGGG
CCCCATGGAAAGCCGCAGTGGCGTCCAAACCTCCTCCCGCTCTCACCCCA
TCACCGAAACCAGGCGCAGTGCCACTGTCACGAACCTCGACTAGCACGTC
AACAAACGCCAGTACATCGCTGTCTTCCACGTCTGCAAGGCCGTCAAGCC
CTGGAGAGTTCCAAGTGGTACAGTCGAAATCAGCTACACCCGCACGGCCC
AAGATCGTTGAACGAAACAAGTACGGTCAACGTGTAGACCGAGTTGACTT
TAAAAGCATACCACGAGAAGAACTGAACCGCCTCAAGAAACTGAAATTAT
GCAACCTTCATTACCTTCTAGGAGAATGTACAGTTGATAACTGTCAGCAC
GACCACTCGCGCAAGTTGACCAAAAATGAACTTTCAATCTTGTCCGCCAT
CGCCCGCATGACCCCCTGCCGATACGGATTAGAATGCGATGATCCGGAAT
GTACATATGGGCATCGATGCCCTCATGCAGAACCCGGGAAAAGGGACTGT
TACTGGGGTTCGAATTGTCGATTTGATCCTGCCGCCCATGGCATCGACAC
CAATATCGTTAAATTAACTAAGGTCTAAGACCGCGAGCCCTTCATAGTTG
TGCTACTAGATGGAACTGGCATCATCTTCAGAGATGAATTTTTACAAAAG
GGAGAAGAAGGTGGAAAGATTGCAGCCAAGAAGCTTGCTGTCGCCCTAAA
AGACTATGTTGCCAGCAATTTCCCAGGCCTTGATGCTCCAAAGATAATCG
CAAGGATGTACGTCAACTTAAAGGGCCTGAGTGAGATGTGTGTCCGAGGC
GTCATTAGCACCGACCCATCATCAGTCGAGGGCTTTGCTAGGGGCTTCAA
CAATGGCCATCCATTATTTGACCTTGTGGATACTGGACTGGACAACGCAC
ATGATAAGATCGCAGGAACTTTTGCAGCGTGTGACAGAGTTGGAGGCAGC
CTTCCAGCAAGAGAAACTCGATCATGAACGTGAAACGCGGTTTAATCGTG
ATATCCAGCTTCATGAAATGGAGTTAATGCAGCATATCGCGAGGATCAAG
GCCATAATGATGACAGCGCCGGAGTATCTCGAGCGATATAAACAGCTGGC
TTCTATAGAACAAGATAAGAATATCCTAATCGAG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_004320-T1.utr3p1 | KJC3_004320-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_004320-T1.utr5p1 | KJC3_004320-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch3 | supercontig | ch3:4530526..4532654 - |
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