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KJC3_004327-T1, KJC3_004327-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_004327-T1
Unique NameKJC3_004327-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch3:4551046..4552890+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_004327-T1 ID=KJC3_004327-T1|Name=KJC3_004327-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1845bp|location=Sequence derived from alignment at ch3:4551046..4552890+ (Aspergillus niger KJC3)
ATGCCTCCGAAAGGTGCTCCCCGACGAGGAGCACCGGCCGGCGCAGCCAG
CCGCGCCAATGCATCTACAACCGCCTCCGCGAGTCCCGCGCCCAGCGCCA
CCACCACGGGCGACTCCCAGACTCCAACACCCGGCCCATCAGCCTCCGGG
CGAGCCCCCGTCCAGCGCCTTCAATCGCTCAAGAAACGCACACCCTCCGG
CAGCATCGGACCGGCCGCGAAACCCCCCGGCGCGCCCGCTGCGCCCGGCG
AACCTGCCAAGCCCACACTCAAATACAAGCCGCGCGCCGTCGGCCGTCGC
AGCAAGGAGGAGCGAGAAGCCATCGAGAAGCTCGAAGCCGAGCGGCACCG
CGAGCGCCTGAAGGAGGCGGCGGCGATTCAGCGCGGCCGGGATCAAGGCG
GTCCTGGTGGTCGCGGTGGGTTTGGGCGCGGGCGTGGCGGACCTTTGGGG
TCTGCGGGCGGGCCATTGGGCTCGGGGATGTCTGGGCGTCGGGGTAGAGG
AGGACGGTTTGGACAGGATTCGAGACATTCGTCTATGTCGAGACGCAGTC
GGTCGGTCATTGATCTGGGAAATACGGCGGCGGGTGCGGGGACGCGCGAT
TACTCGTCGGATGAGAGTGATGGCGAGGTGCGCATCAGTATTGACCAGAT
CAATTTGGATAGTGATGAGGAGGATCAGGAGCAGATGATGGTCGATAGCA
AGAAGGGGAAGGCGGCGGTTAAGTATGCCGATGCTGAGAAGGGGTTACGG
CCTATTCGCGTCGAGAGACATGAGCATGAGGAGCGCGTGGTCAGTGTCAA
TATGGAGTCGAGCTCGAGCAAGTCGGCGGAGCTGAGGGAGAAGGCTAAGG
CGCAGGCGAAGGAGGATGATGGTGCGCTCTTTGTGCAGCAGAATGATGAT
GATGCTGCGGCTACTACGGAAGGAGAGCCCAAGGTCAAGTCTGAGCCTAC
GGATGATGATGATCAGGTCATGACAGATGTTCCGCATGCCGAGGAGCCAG
CTACGACGGATGATGGATTGCTGCCGGTACAGAAGGTCAAGGTGCGCAGG
AAAATCACACCCCCGTCGAACGAGGCGACACCCCAGCCCGAAATGGAGAT
CCCTGCTGCCGTGAAGGACCCGAAGAGTTTACTACGCACGAAGGAGGATA
TCGAAGAGTACGAGCGACACGAGCAGGACCTGGAGATTGTCAAGGACCTC
TTCCAGAAGGAGCCCGAACCTGAAAAATCGGAGACCACCACCCCGGCAGA
GGGAGAGGCCCCTGCTGTGGTTGCGAATGACCAGGACAAGGACAAGGACA
GTACAATGGAGGACAAGGACAAGGAACAGGAGGAAGAGGATGTCAACAAG
GACAAGTTGGCGGGGCAGCTGTTCCTGATGCAATTCCCACCGATGACGCC
GAACCTGGTGGTACCGGGCAACAACGAGAATCCAGCGGATGAAGCTACAG
ATGCGATGGCGGGGCAGAGCGCACCGGAGGCCAGTGGGTCGGAGCAGACA
GGCGTCAAGCGCGAAGATGGCGTGGAGATCCTCGAAGGTGGAGAGGATGC
CACGGCAACAGGGACGTCATCCAAGATTGTCACTGCAACCGACTGGGGCC
TCAGCGCCGGGCGCGTCGGCAAGCTGAACGTCCATGCGTCGGGTCGGGTG
ACGATGGACTGGGGAGGCATCAGCTTCGAGCTGGATCGCGCAACAGCCGT
GGACTTTCTCCAGGAAGCGTTGATCGTGTCGACCCCGCCTAATGCAGCGG
ACGAGGAATTCCCGGATGATGAAAAGAAGGTGTGGGCGATGGGACAGCTG
AGTGGGAAGTTTACGGTGACACCGGACTGGGGGAAGATGCTGTAA
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Coding sequence (CDS) from alignment at ch3:4551046..4552890+

>KJC3_004327-T1 ID=KJC3_004327-T1|Name=KJC3_004327-T1|organism=Aspergillus niger KJC3|type=CDS|length=1845bp|location=Sequence derived from alignment at ch3:4551046..4552890+ (Aspergillus niger KJC3)
ATGCCTCCGAAAGGTGCTCCCCGACGAGGAGCACCGGCCGGCGCAGCCAG
CCGCGCCAATGCATCTACAACCGCCTCCGCGAGTCCCGCGCCCAGCGCCA
CCACCACGGGCGACTCCCAGACTCCAACACCCGGCCCATCAGCCTCCGGG
CGAGCCCCCGTCCAGCGCCTTCAATCGCTCAAGAAACGCACACCCTCCGG
CAGCATCGGACCGGCCGCGAAACCCCCCGGCGCGCCCGCTGCGCCCGGCG
AACCTGCCAAGCCCACACTCAAATACAAGCCGCGCGCCGTCGGCCGTCGC
AGCAAGGAGGAGCGAGAAGCCATCGAGAAGCTCGAAGCCGAGCGGCACCG
CGAGCGCCTGAAGGAGGCGGCGGCGATTCAGCGCGGCCGGGATCAAGGCG
GTCCTGGTGGTCGCGGTGGGTTTGGGCGCGGGCGTGGCGGACCTTTGGGG
TCTGCGGGCGGGCCATTGGGCTCGGGGATGTCTGGGCGTCGGGGTAGAGG
AGGACGGTTTGGACAGGATTCGAGACATTCGTCTATGTCGAGACGCAGTC
GGTCGGTCATTGATCTGGGAAATACGGCGGCGGGTGCGGGGACGCGCGAT
TACTCGTCGGATGAGAGTGATGGCGAGGTGCGCATCAGTATTGACCAGAT
CAATTTGGATAGTGATGAGGAGGATCAGGAGCAGATGATGGTCGATAGCA
AGAAGGGGAAGGCGGCGGTTAAGTATGCCGATGCTGAGAAGGGGTTACGG
CCTATTCGCGTCGAGAGACATGAGCATGAGGAGCGCGTGGTCAGTGTCAA
TATGGAGTCGAGCTCGAGCAAGTCGGCGGAGCTGAGGGAGAAGGCTAAGG
CGCAGGCGAAGGAGGATGATGGTGCGCTCTTTGTGCAGCAGAATGATGAT
GATGCTGCGGCTACTACGGAAGGAGAGCCCAAGGTCAAGTCTGAGCCTAC
GGATGATGATGATCAGGTCATGACAGATGTTCCGCATGCCGAGGAGCCAG
CTACGACGGATGATGGATTGCTGCCGGTACAGAAGGTCAAGGTGCGCAGG
AAAATCACACCCCCGTCGAACGAGGCGACACCCCAGCCCGAAATGGAGAT
CCCTGCTGCCGTGAAGGACCCGAAGAGTTTACTACGCACGAAGGAGGATA
TCGAAGAGTACGAGCGACACGAGCAGGACCTGGAGATTGTCAAGGACCTC
TTCCAGAAGGAGCCCGAACCTGAAAAATCGGAGACCACCACCCCGGCAGA
GGGAGAGGCCCCTGCTGTGGTTGCGAATGACCAGGACAAGGACAAGGACA
GTACAATGGAGGACAAGGACAAGGAACAGGAGGAAGAGGATGTCAACAAG
GACAAGTTGGCGGGGCAGCTGTTCCTGATGCAATTCCCACCGATGACGCC
GAACCTGGTGGTACCGGGCAACAACGAGAATCCAGCGGATGAAGCTACAG
ATGCGATGGCGGGGCAGAGCGCACCGGAGGCCAGTGGGTCGGAGCAGACA
GGCGTCAAGCGCGAAGATGGCGTGGAGATCCTCGAAGGTGGAGAGGATGC
CACGGCAACAGGGACGTCATCCAAGATTGTCACTGCAACCGACTGGGGCC
TCAGCGCCGGGCGCGTCGGCAAGCTGAACGTCCATGCGTCGGGTCGGGTG
ACGATGGACTGGGGAGGCATCAGCTTCGAGCTGGATCGCGCAACAGCCGT
GGACTTTCTCCAGGAAGCGTTGATCGTGTCGACCCCGCCTAATGCAGCGG
ACGAGGAATTCCCGGATGATGAAAAGAAGGTGTGGGCGATGGGACAGCTG
AGTGGGAAGTTTACGGTGACACCGGACTGGGGGAAGATGCTGTAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005666RNA polymerase III complex
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
Vocabulary: Biological Process
TermDefinition
GO:0006383transcription by RNA polymerase III
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_004327KJC3_004327Aspergillus niger KJC3gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_004327-T1.exon1KJC3_004327-T1.exon1Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_004327-T1.cdsKJC3_004327-T1.cdsAspergillus niger KJC3CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_004327-T1KJC3_004327-T1-proteinAspergillus niger KJC3polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR007811
DBxrefPFAM:PF05132
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch3supercontigch3:4551046..4552890 +
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