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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch3:4588675..4590721+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_004337-T1 ID=KJC3_004337-T1|Name=KJC3_004337-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2047bp|location=Sequence derived from alignment at ch3:4588675..4590721+ (Aspergillus niger KJC3)
CTCAGCCGCTCTCTCTCCCTCTTTTCTCTTCCCTCCTCTAATTACTTTGT
CGCCAGGAACACACGGCTTTGCTGGCTTGAGACTTTACTCATTCATCCTT
TTGCTTGTTGTTGATACTGTTATCTTTGATACCCTTTATTCGTCGCTTGT
GTTCGTCGGAAATCTTACCCTCTACTTCCTACTATCAGTATGTGTTCCCG
CTATCGCTTAAAATTTAGATGTTACTAGCTTGAGCCTCCGGTATGCTGAC
TGATTTGGTATGATTTAGTGTCGAAAGCGGACGTTGACCTCTACGGTATA
TATATTGTCTACTCTTAATTTCTGCAGAGAGAAAATGCGGAAAGCCAACA
TTACAACAGCGACTAATCAGAATATGATGGATTACAGAGGTCTTGGGCAT
TGACAAGAGTGCCGGCAAAGATGATATCCGGAAGGCATATCGCAAGGTAT
TCAGATTCTCTATATCGAACACAGTATTGAAGTACAGTCTAATACTTTTT
GGGTCCAAAGGCCGCTCTAGCAAATCACCCCGACAAAGTCCCCGAAGCCG
AAAGACAAGATGCAGAGGTCCGATTCAAGGCCGTGCAGGAAGCCTACGAC
ATCCTCTACGACGAAGAGAAGCGTGAGATCTACGATACCCATGGAATGGG
CGCTTTCAACGGCTCCGGTGAACCGGGTATGGGCGCGGGCCCTGATTTGG
ATGATATTCTTGCGCAGATGTTCGGTGGTATGGGAGGTATGGGCGGCATG
GGCGGAATGCCCGGTGGTCCGCATGCGCGTAAGCCGCGCAAGAGCCCGGA
TGAGGAGCAGAAGTATGAGGTTCGCCTGGAGGATCTGTACAAGGGCAAGA
CGGTCAAGTTTGCCAGCACGAAGAATGTGATTTGCTCTCTGTGTCAAGGC
AAGGGTGGTAAGGAGAGGGCGACGGCCAGGAAGTGCTCCACTTGCGATGG
TGAAGGTAGGTTCATATACCTATGGGACTTGGTGTGCAGAATTCCGGGCT
AATGTATTGCTTCGCAGGTTACAAGCAGATTTTGCGCCCGATGGGTCAGT
TCCTGTCTCCGGCTATGGTTCCCTGCCCTACCTGTAACGGAGCGGGTGAC
TACTTTGTCGACAAGGATAAGTGCAAGAAGTGCAAGGGCAAGAAGACCAC
CGAGGCTAAGAAGTTGCTGGAGATCTACATCCCTCGCGGGGCGAGGTGAG
TCTAGCTATGTGTCGTACTGCCTCGAGTGCAGTAACTAACACTGTGATTA
GGGAAGGAGACAAGATCATCCTCGAGGGCGAGGCCGACCAGGTGCCGGGT
CAGGAACCTGGAGATATCGTTTTCCACATCGTGGAAGAGGAGCACGAGAC
TTTCCGAAGGGCTGCTGCCGATCTGACGGCAACAATCGATGTTACGCTGG
CCGAGGCTCTGACGGGCTTCTCCCGGGTGGTAGTCAAGCACCTTGACGGT
CGCGGAATCGAAATTCAGCACCCCAAGACCCCAGGTGAGGTTCTGTATCC
GGGCCAGGTCCTGAAGGTGCCTGGTGAGGGTATGCCCATCAAGCGCAGCG
ATGCCCGTGGTGACCTGTACCTGGTCGTCAACATCAAGTTCCCCGACGGG
AAATGGAAGCCCAGCCCTGCTGTTCTGGAGCAACTCAAGGAACTGTTGCC
CAAGCCGGAACCCCCTATTCAGGCTGACACCGTGGACGAGGTAGAGTTCG
ACCCCAAGGGCAATCTGGATGACTTTGGGGCGCATGACCCCGAGGGGGGT
TCTGCATGGGAGGATGATGATGAGGGTGAGACGACTGCGCAGTGTGCGAC
CCAGTAGACTTTTGGCATGGCTTATGCTTTCTCTGTATCTGTTTTGCCTC
TGCTCCTTCTTTTGTTTCTGTCCTTTTCGAGGACATTATACCTCTCTGCT
AGTTCACCTCATGATGATAGACTCGTTGGCTGCTTCTGGATCAGCTCCTC
TCTCGCATCGTGGGCGTTTCGGGTCAACTACTATTATGGATTGATCGATG
AGATAAATATAGTTTTATGATGGGAATGATGATTGTTGAGTGTGCAA back to topCoding sequence (CDS) from alignment at ch3:4588675..4590721+ >KJC3_004337-T1 ID=KJC3_004337-T1|Name=KJC3_004337-T1|organism=Aspergillus niger KJC3|type=CDS|length=7596bp|location=Sequence derived from alignment at ch3:4588675..4590721+ (Aspergillus niger KJC3)
ATGTCGAAAGCGGACGTTGACCTCTACGAGGTCTTGGGCATTGACAAGAG
TGCCGGCAAAGATGATATCCGGAAGGCATATCGCAAGGCCGCTCTAGCAA
ATCACCCCGACAAAGTCCCCGAAGCCGAAAGACAAGATGCAGAGGTCCGA
TTCAAGGCCGTGCAGGAAGCCTACGACATCCTCTACGACGAAGAGAAGCG
TGAGATCTACGATACCCATGGAATGGGCGCTTTCAACGGCTCCGGTGAAC
CGGGTATGGGCGCGGGCCCTGATTTGGATGATATTCTTGCGCAGATGTTC
GGTGGTATGGGAGGTATGGGCGGCATGGGCGGAATGCCCGGTGGTCCGCA
TGCGCGTAAGCCGCGCAAGAGCCCGGATGAGGAGCAGAAGTATGAGGTTC
GCCTGGAGGATCTGTACAAGGGCAAGACGGTCAAGTTTGCCAGCACGAAG
AATGTGATTTGCTCTCTGTGTCAAGGCAAGGGTGGTAAGGAGAGGGCGAC
GGCCAGGAAGTGCTCCACTTGCGATGGTGAAGGTTACAAGCAGATTTTGC
GCCCGATGGGTCAGTTCCTGTCTCCGGCTATGGTTCCCTGCCCTACCTGT
AACGGAGCGGGTGACTACTTTGTCGACAAGGATAAGTGCAAGAAGTGCAA
GGGCAAGAAGACCACCGAGGCTAAGAAGTTGCTGGAGATCTACATCCCTC
GCGGGGCGAGGGAAGGAGACAAGATCATCCTCGAGGGCGAGGCCGACCAG
GTGCCGGGTCAGGAACCTGGAGATATCGTTTTCCACATCGTGGAAGAGGA
GCACGAGACTTTCCGAAGGGCTGCTGCCGATCTGACGGCAACAATCGATG
TTACGCTGGCCGAGGCTCTGACGGGCTTCTCCCGGGTGGTAGTCAAGCAC
CTTGACGGTCGCGGAATCGAAATTCAGCACCCCAAGACCCCAGGTGAGGT
TCTGTATCCGGGCCAGGTCCTGAAGGTGCCTGGTGAGGGTATGCCCATCA
AGCGCAGCGATGCCCGTGGTGACCTGTACCTGGTCGTCAACATCAAGTTC
CCCGACGGGAAATGGAAGCCCAGCCCTGCTGTTCTGGAGCAACTCAAGGA
ACTGTTGCCCAAGCCGGAACCCCCTATTCAGGCTGACACCGTGGACGAGG
TAGAGTTCGACCCCAAGGGCAATCTGGATGACTTTGGGGCGCATGACCCC
GAGGGGGGTTCTGCATGGGAGGATGATGATGAGGGTGAGACGACTGCGCA
GTGTGCGACCCAGTAGATGTCGAAAGCGGACGTTGACCTCTACGAGGTCT
TGGGCATTGACAAGAGTGCCGGCAAAGATGATATCCGGAAGGCATATCGC
AAGGCCGCTCTAGCAAATCACCCCGACAAAGTCCCCGAAGCCGAAAGACA
AGATGCAGAGGTCCGATTCAAGGCCGTGCAGGAAGCCTACGACATCCTCT
ACGACGAAGAGAAGCGTGAGATCTACGATACCCATGGAATGGGCGCTTTC
AACGGCTCCGGTGAACCGGGTATGGGCGCGGGCCCTGATTTGGATGATAT
TCTTGCGCAGATGTTCGGTGGTATGGGAGGTATGGGCGGCATGGGCGGAA
TGCCCGGTGGTCCGCATGCGCGTAAGCCGCGCAAGAGCCCGGATGAGGAG
CAGAAGTATGAGGTTCGCCTGGAGGATCTGTACAAGGGCAAGACGGTCAA
GTTTGCCAGCACGAAGAATGTGATTTGCTCTCTGTGTCAAGGCAAGGGTG
GTAAGGAGAGGGCGACGGCCAGGAAGTGCTCCACTTGCGATGGTGAAGGT
TACAAGCAGATTTTGCGCCCGATGGGTCAGTTCCTGTCTCCGGCTATGGT
TCCCTGCCCTACCTGTAACGGAGCGGGTGACTACTTTGTCGACAAGGATA
AGTGCAAGAAGTGCAAGGGCAAGAAGACCACCGAGGCTAAGAAGTTGCTG
GAGATCTACATCCCTCGCGGGGCGAGGGAAGGAGACAAGATCATCCTCGA
GGGCGAGGCCGACCAGGTGCCGGGTCAGGAACCTGGAGATATCGTTTTCC
ACATCGTGGAAGAGGAGCACGAGACTTTCCGAAGGGCTGCTGCCGATCTG
ACGGCAACAATCGATGTTACGCTGGCCGAGGCTCTGACGGGCTTCTCCCG
GGTGGTAGTCAAGCACCTTGACGGTCGCGGAATCGAAATTCAGCACCCCA
AGACCCCAGGTGAGGTTCTGTATCCGGGCCAGGTCCTGAAGGTGCCTGGT
GAGGGTATGCCCATCAAGCGCAGCGATGCCCGTGGTGACCTGTACCTGGT
CGTCAACATCAAGTTCCCCGACGGGAAATGGAAGCCCAGCCCTGCTGTTC
TGGAGCAACTCAAGGAACTGTTGCCCAAGCCGGAACCCCCTATTCAGGCT
GACACCGTGGACGAGGTAGAGTTCGACCCCAAGGGCAATCTGGATGACTT
TGGGGCGCATGACCCCGAGGGGGGTTCTGCATGGGAGGATGATGATGAGG
GTGAGACGACTGCGCAGTGTGCGACCCAGTAGATGTCGAAAGCGGACGTT
GACCTCTACGAGGTCTTGGGCATTGACAAGAGTGCCGGCAAAGATGATAT
CCGGAAGGCATATCGCAAGGCCGCTCTAGCAAATCACCCCGACAAAGTCC
CCGAAGCCGAAAGACAAGATGCAGAGGTCCGATTCAAGGCCGTGCAGGAA
GCCTACGACATCCTCTACGACGAAGAGAAGCGTGAGATCTACGATACCCA
TGGAATGGGCGCTTTCAACGGCTCCGGTGAACCGGGTATGGGCGCGGGCC
CTGATTTGGATGATATTCTTGCGCAGATGTTCGGTGGTATGGGAGGTATG
GGCGGCATGGGCGGAATGCCCGGTGGTCCGCATGCGCGTAAGCCGCGCAA
GAGCCCGGATGAGGAGCAGAAGTATGAGGTTCGCCTGGAGGATCTGTACA
AGGGCAAGACGGTCAAGTTTGCCAGCACGAAGAATGTGATTTGCTCTCTG
TGTCAAGGCAAGGGTGGTAAGGAGAGGGCGACGGCCAGGAAGTGCTCCAC
TTGCGATGGTGAAGGTTACAAGCAGATTTTGCGCCCGATGGGTCAGTTCC
TGTCTCCGGCTATGGTTCCCTGCCCTACCTGTAACGGAGCGGGTGACTAC
TTTGTCGACAAGGATAAGTGCAAGAAGTGCAAGGGCAAGAAGACCACCGA
GGCTAAGAAGTTGCTGGAGATCTACATCCCTCGCGGGGCGAGGGAAGGAG
ACAAGATCATCCTCGAGGGCGAGGCCGACCAGGTGCCGGGTCAGGAACCT
GGAGATATCGTTTTCCACATCGTGGAAGAGGAGCACGAGACTTTCCGAAG
GGCTGCTGCCGATCTGACGGCAACAATCGATGTTACGCTGGCCGAGGCTC
TGACGGGCTTCTCCCGGGTGGTAGTCAAGCACCTTGACGGTCGCGGAATC
GAAATTCAGCACCCCAAGACCCCAGGTGAGGTTCTGTATCCGGGCCAGGT
CCTGAAGGTGCCTGGTGAGGGTATGCCCATCAAGCGCAGCGATGCCCGTG
GTGACCTGTACCTGGTCGTCAACATCAAGTTCCCCGACGGGAAATGGAAG
CCCAGCCCTGCTGTTCTGGAGCAACTCAAGGAACTGTTGCCCAAGCCGGA
ACCCCCTATTCAGGCTGACACCGTGGACGAGGTAGAGTTCGACCCCAAGG
GCAATCTGGATGACTTTGGGGCGCATGACCCCGAGGGGGGTTCTGCATGG
GAGGATGATGATGAGGGTGAGACGACTGCGCAGTGTGCGACCCAGTAGAT
GTCGAAAGCGGACGTTGACCTCTACGAGGTCTTGGGCATTGACAAGAGTG
CCGGCAAAGATGATATCCGGAAGGCATATCGCAAGGCCGCTCTAGCAAAT
CACCCCGACAAAGTCCCCGAAGCCGAAAGACAAGATGCAGAGGTCCGATT
CAAGGCCGTGCAGGAAGCCTACGACATCCTCTACGACGAAGAGAAGCGTG
AGATCTACGATACCCATGGAATGGGCGCTTTCAACGGCTCCGGTGAACCG
GGTATGGGCGCGGGCCCTGATTTGGATGATATTCTTGCGCAGATGTTCGG
TGGTATGGGAGGTATGGGCGGCATGGGCGGAATGCCCGGTGGTCCGCATG
CGCGTAAGCCGCGCAAGAGCCCGGATGAGGAGCAGAAGTATGAGGTTCGC
CTGGAGGATCTGTACAAGGGCAAGACGGTCAAGTTTGCCAGCACGAAGAA
TGTGATTTGCTCTCTGTGTCAAGGCAAGGGTGGTAAGGAGAGGGCGACGG
CCAGGAAGTGCTCCACTTGCGATGGTGAAGGTTACAAGCAGATTTTGCGC
CCGATGGGTCAGTTCCTGTCTCCGGCTATGGTTCCCTGCCCTACCTGTAA
CGGAGCGGGTGACTACTTTGTCGACAAGGATAAGTGCAAGAAGTGCAAGG
GCAAGAAGACCACCGAGGCTAAGAAGTTGCTGGAGATCTACATCCCTCGC
GGGGCGAGGGAAGGAGACAAGATCATCCTCGAGGGCGAGGCCGACCAGGT
GCCGGGTCAGGAACCTGGAGATATCGTTTTCCACATCGTGGAAGAGGAGC
ACGAGACTTTCCGAAGGGCTGCTGCCGATCTGACGGCAACAATCGATGTT
ACGCTGGCCGAGGCTCTGACGGGCTTCTCCCGGGTGGTAGTCAAGCACCT
TGACGGTCGCGGAATCGAAATTCAGCACCCCAAGACCCCAGGTGAGGTTC
TGTATCCGGGCCAGGTCCTGAAGGTGCCTGGTGAGGGTATGCCCATCAAG
CGCAGCGATGCCCGTGGTGACCTGTACCTGGTCGTCAACATCAAGTTCCC
CGACGGGAAATGGAAGCCCAGCCCTGCTGTTCTGGAGCAACTCAAGGAAC
TGTTGCCCAAGCCGGAACCCCCTATTCAGGCTGACACCGTGGACGAGGTA
GAGTTCGACCCCAAGGGCAATCTGGATGACTTTGGGGCGCATGACCCCGA
GGGGGGTTCTGCATGGGAGGATGATGATGAGGGTGAGACGACTGCGCAGT
GTGCGACCCAGTAGATGTCGAAAGCGGACGTTGACCTCTACGAGGTCTTG
GGCATTGACAAGAGTGCCGGCAAAGATGATATCCGGAAGGCATATCGCAA
GGCCGCTCTAGCAAATCACCCCGACAAAGTCCCCGAAGCCGAAAGACAAG
ATGCAGAGGTCCGATTCAAGGCCGTGCAGGAAGCCTACGACATCCTCTAC
GACGAAGAGAAGCGTGAGATCTACGATACCCATGGAATGGGCGCTTTCAA
CGGCTCCGGTGAACCGGGTATGGGCGCGGGCCCTGATTTGGATGATATTC
TTGCGCAGATGTTCGGTGGTATGGGAGGTATGGGCGGCATGGGCGGAATG
CCCGGTGGTCCGCATGCGCGTAAGCCGCGCAAGAGCCCGGATGAGGAGCA
GAAGTATGAGGTTCGCCTGGAGGATCTGTACAAGGGCAAGACGGTCAAGT
TTGCCAGCACGAAGAATGTGATTTGCTCTCTGTGTCAAGGCAAGGGTGGT
AAGGAGAGGGCGACGGCCAGGAAGTGCTCCACTTGCGATGGTGAAGGTTA
CAAGCAGATTTTGCGCCCGATGGGTCAGTTCCTGTCTCCGGCTATGGTTC
CCTGCCCTACCTGTAACGGAGCGGGTGACTACTTTGTCGACAAGGATAAG
TGCAAGAAGTGCAAGGGCAAGAAGACCACCGAGGCTAAGAAGTTGCTGGA
GATCTACATCCCTCGCGGGGCGAGGGAAGGAGACAAGATCATCCTCGAGG
GCGAGGCCGACCAGGTGCCGGGTCAGGAACCTGGAGATATCGTTTTCCAC
ATCGTGGAAGAGGAGCACGAGACTTTCCGAAGGGCTGCTGCCGATCTGAC
GGCAACAATCGATGTTACGCTGGCCGAGGCTCTGACGGGCTTCTCCCGGG
TGGTAGTCAAGCACCTTGACGGTCGCGGAATCGAAATTCAGCACCCCAAG
ACCCCAGGTGAGGTTCTGTATCCGGGCCAGGTCCTGAAGGTGCCTGGTGA
GGGTATGCCCATCAAGCGCAGCGATGCCCGTGGTGACCTGTACCTGGTCG
TCAACATCAAGTTCCCCGACGGGAAATGGAAGCCCAGCCCTGCTGTTCTG
GAGCAACTCAAGGAACTGTTGCCCAAGCCGGAACCCCCTATTCAGGCTGA
CACCGTGGACGAGGTAGAGTTCGACCCCAAGGGCAATCTGGATGACTTTG
GGGCGCATGACCCCGAGGGGGGTTCTGCATGGGAGGATGATGATGAGGGT
GAGACGACTGCGCAGTGTGCGACCCAGTAGATGTCGAAAGCGGACGTTGA
CCTCTACGAGGTCTTGGGCATTGACAAGAGTGCCGGCAAAGATGATATCC
GGAAGGCATATCGCAAGGCCGCTCTAGCAAATCACCCCGACAAAGTCCCC
GAAGCCGAAAGACAAGATGCAGAGGTCCGATTCAAGGCCGTGCAGGAAGC
CTACGACATCCTCTACGACGAAGAGAAGCGTGAGATCTACGATACCCATG
GAATGGGCGCTTTCAACGGCTCCGGTGAACCGGGTATGGGCGCGGGCCCT
GATTTGGATGATATTCTTGCGCAGATGTTCGGTGGTATGGGAGGTATGGG
CGGCATGGGCGGAATGCCCGGTGGTCCGCATGCGCGTAAGCCGCGCAAGA
GCCCGGATGAGGAGCAGAAGTATGAGGTTCGCCTGGAGGATCTGTACAAG
GGCAAGACGGTCAAGTTTGCCAGCACGAAGAATGTGATTTGCTCTCTGTG
TCAAGGCAAGGGTGGTAAGGAGAGGGCGACGGCCAGGAAGTGCTCCACTT
GCGATGGTGAAGGTTACAAGCAGATTTTGCGCCCGATGGGTCAGTTCCTG
TCTCCGGCTATGGTTCCCTGCCCTACCTGTAACGGAGCGGGTGACTACTT
TGTCGACAAGGATAAGTGCAAGAAGTGCAAGGGCAAGAAGACCACCGAGG
CTAAGAAGTTGCTGGAGATCTACATCCCTCGCGGGGCGAGGGAAGGAGAC
AAGATCATCCTCGAGGGCGAGGCCGACCAGGTGCCGGGTCAGGAACCTGG
AGATATCGTTTTCCACATCGTGGAAGAGGAGCACGAGACTTTCCGAAGGG
CTGCTGCCGATCTGACGGCAACAATCGATGTTACGCTGGCCGAGGCTCTG
ACGGGCTTCTCCCGGGTGGTAGTCAAGCACCTTGACGGTCGCGGAATCGA
AATTCAGCACCCCAAGACCCCAGGTGAGGTTCTGTATCCGGGCCAGGTCC
TGAAGGTGCCTGGTGAGGGTATGCCCATCAAGCGCAGCGATGCCCGTGGT
GACCTGTACCTGGTCGTCAACATCAAGTTCCCCGACGGGAAATGGAAGCC
CAGCCCTGCTGTTCTGGAGCAACTCAAGGAACTGTTGCCCAAGCCGGAAC
CCCCTATTCAGGCTGACACCGTGGACGAGGTAGAGTTCGACCCCAAGGGC
AATCTGGATGACTTTGGGGCGCATGACCCCGAGGGGGGTTCTGCATGGGA
GGATGATGATGAGGGTGAGACGACTGCGCAGTGTGCGACCCAGTAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006457 | protein folding |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0051082 | unfolded protein binding |
| GO:0031072 | heat shock protein binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_004337-T1.utr5p1 | KJC3_004337-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_004337-T1.utr3p1 | KJC3_004337-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR036410 |
| DBxref | InterPro:IPR008971 |
| DBxref | InterPro:IPR018253 |
| DBxref | InterPro:IPR001305 |
| DBxref | InterPro:IPR036869 |
| DBxref | InterPro:IPR002939 |
| DBxref | InterPro:IPR001623 |
| DBxref | PFAM:PF00684 |
| DBxref | PFAM:PF01556 |
| DBxref | PFAM:PF00226 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch3 | supercontig | ch3:4588675..4590721 + |
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