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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch3:4623065..4624760+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_004349-T1 ID=KJC3_004349-T1|Name=KJC3_004349-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1696bp|location=Sequence derived from alignment at ch3:4623065..4624760+ (Aspergillus niger KJC3)
CTGACCTGCAGTTGCAGACTAGAGTGTCAGTAACCGCAAAGATGAGCGGA
CAGAACAAAGCGTTATATTCGGAGCCCAATGTACTGACTTCCTCTTTGAA
GGTGGGAGCCGTGAGTGGTTAGTTTCCAATCCCATTCCGGTGACTGGTAG
ACCGGCTTGTATTGCCTCAACTCAGGAACCATATGTCTGAGACTCATTAC
AGCAGCCCTACTTACTCAGTTTCATTAACAGGTTCTGCTGGCCTCGTATA
TGGGGGAATATCAGGAGTAATTCGGTCCCCTCATCCGGTCATTCATTCTA
TCTCTTGCGGAATCCACTGGTTTGCATGTGGAGCCTCCTTTTGGTGTGAG
TTATCCCCTCGTCTATCCCTTATAGATCTGGAATTGATATCAATCTTGCT
GCTACAGGGTTGAGAAGCAACATTCTGAAGCTTCACTATGAAGACAAGGC
TACCCCTAAGCAACGGGCTTATGTCAGCGCCCTCTCTGGAGGAGTTGCTG
GAGGGGCCGTTACGAGGCTAATGGGTGAGTTTGGCAGCATCCTTCTTTTC
CCCGTTTGAGAGAAAAAGAGGTGGTGGTGGTTGGTTTACTGATGGCCGGA
GCTAGGCGGGCGACTTGTCCCTGGACTAGTTGTTTTTTCGCTACTAGGCT
ATGTCGGGCAAAGCTCTTATAATGCGATCGACACCTGGCAAATGGAGAAC
GCGAATACGACGTCTAAGCCGTTCCTGCAGCGGATGGCCGACTCCAAATG
GATCCCGCTCAAGTCACTCTCGGATGACGATTACAGGGGTATTTTGAACG
AGAAAGTGTTGAGTATCGAGGCTGAAATCGCACTCATTGACGACAAGATC
GGGGAGCTTGAAAAGTTAAAGACTAGTGGACTCGAATCGGGCAATTCGGA
TCCTGCAGCTAAGTAGTCGGTTTCTAGACGGCCACTAGCAACTTGGCTAT
GGGTGCGAGAAGAGAAAAGGTACGGCCATGCTCGAATGGTTGGGGGCCGA
TCTTACATGTCCGATCTATCTATGTTAAGGAGAGAATTGAGTGATCGCGG
GTGAACGTAGATCGTTCACTTGCCCTCCAAGATAGAACTCCCGGCAGTAT
TGTGTTGCACTTGCACCCAGCTTTGCAAGGATGTTGTGCTCGCATAGGAA
AGAGTTTTGAACGTTGCGACTTTGGAACTTCGACCACAACACGATGGTCG
GATCCGCCGTATCTTTAGGTTGGCTACGGGGGCCGGTGCCGCCACTTCCA
TGAGCCCTCCAGAAGGAGTTTACCTTTGTCGTGTATCATATTTCTCACAT
TGTTCCCAGACACATGTATTTTAATTTGAAACAAGACCCTGTATGATCAT
GAAGCAGACCCTAGTTACATGGAACACTACGGAGTATTCGCAATCAACAA
CTGTTTCTTTCTGCTCCACACGCCAAGAAGAATTCTGGATATTGTTGGGA
AGGTTTCGTGAGGAATCCACCATCAAGCGATAGATACTTGGTGAGGAGAA
TGTTGCGCTTAATTTCAAGGAGGAAAATGCCAAATTGCCGTGTTCGTAGA
TACCAAAAGTCCAACCTAAAACGACCACGCTGCTAAGCTTTGTGTGAGGC
AGGGCCCCATCGAGCCAGGGGGAAGGAACAAAAAATGCTCCCCGATCGAC
TGCAGCAGACCTTTTGAGGCTCGGAAGGTGCGTCGAATTGCTTGCT back to topCoding sequence (CDS) from alignment at ch3:4623065..4624760+ >KJC3_004349-T1 ID=KJC3_004349-T1|Name=KJC3_004349-T1|organism=Aspergillus niger KJC3|type=CDS|length=2472bp|location=Sequence derived from alignment at ch3:4623065..4624760+ (Aspergillus niger KJC3)
ATGAGCGGACAGAACAAAGCGTTATATTCGGAGCCCAATGTACTGACTTC
CTCTTTGAAGGTGGGAGCCGTGAGTGGTTCTGCTGGCCTCGTATATGGGG
GAATATCAGGAGTAATTCGGTCCCCTCATCCGGTCATTCATTCTATCTCT
TGCGGAATCCACTGGTTTGCATGTGGAGCCTCCTTTTGGTGGTTGAGAAG
CAACATTCTGAAGCTTCACTATGAAGACAAGGCTACCCCTAAGCAACGGG
CTTATGTCAGCGCCCTCTCTGGAGGAGTTGCTGGAGGGGCCGTTACGAGG
CTAATGGGCGGGCGACTTGTCCCTGGACTAGTTGTTTTTTCGCTACTAGG
CTATGTCGGGCAAAGCTCTTATAATGCGATCGACACCTGGCAAATGGAGA
ACGCGAATACGACGTCTAAGCCGTTCCTGCAGCGGATGGCCGACTCCAAA
TGGATCCCGCTCAAGTCACTCTCGGATGACGATTACAGGGGTATTTTGAA
CGAGAAAGTGTTGAGTATCGAGGCTGAAATCGCACTCATTGACGACAAGA
TCGGGGAGCTTGAAAAGTTAAAGACTAGTGGACTCGAATCGGGCAATTCG
GATCCTGCAGCTAAGTAGATGAGCGGACAGAACAAAGCGTTATATTCGGA
GCCCAATGTACTGACTTCCTCTTTGAAGGTGGGAGCCGTGAGTGGTTCTG
CTGGCCTCGTATATGGGGGAATATCAGGAGTAATTCGGTCCCCTCATCCG
GTCATTCATTCTATCTCTTGCGGAATCCACTGGTTTGCATGTGGAGCCTC
CTTTTGGTGGTTGAGAAGCAACATTCTGAAGCTTCACTATGAAGACAAGG
CTACCCCTAAGCAACGGGCTTATGTCAGCGCCCTCTCTGGAGGAGTTGCT
GGAGGGGCCGTTACGAGGCTAATGGGCGGGCGACTTGTCCCTGGACTAGT
TGTTTTTTCGCTACTAGGCTATGTCGGGCAAAGCTCTTATAATGCGATCG
ACACCTGGCAAATGGAGAACGCGAATACGACGTCTAAGCCGTTCCTGCAG
CGGATGGCCGACTCCAAATGGATCCCGCTCAAGTCACTCTCGGATGACGA
TTACAGGGGTATTTTGAACGAGAAAGTGTTGAGTATCGAGGCTGAAATCG
CACTCATTGACGACAAGATCGGGGAGCTTGAAAAGTTAAAGACTAGTGGA
CTCGAATCGGGCAATTCGGATCCTGCAGCTAAGTAGATGAGCGGACAGAA
CAAAGCGTTATATTCGGAGCCCAATGTACTGACTTCCTCTTTGAAGGTGG
GAGCCGTGAGTGGTTCTGCTGGCCTCGTATATGGGGGAATATCAGGAGTA
ATTCGGTCCCCTCATCCGGTCATTCATTCTATCTCTTGCGGAATCCACTG
GTTTGCATGTGGAGCCTCCTTTTGGTGGTTGAGAAGCAACATTCTGAAGC
TTCACTATGAAGACAAGGCTACCCCTAAGCAACGGGCTTATGTCAGCGCC
CTCTCTGGAGGAGTTGCTGGAGGGGCCGTTACGAGGCTAATGGGCGGGCG
ACTTGTCCCTGGACTAGTTGTTTTTTCGCTACTAGGCTATGTCGGGCAAA
GCTCTTATAATGCGATCGACACCTGGCAAATGGAGAACGCGAATACGACG
TCTAAGCCGTTCCTGCAGCGGATGGCCGACTCCAAATGGATCCCGCTCAA
GTCACTCTCGGATGACGATTACAGGGGTATTTTGAACGAGAAAGTGTTGA
GTATCGAGGCTGAAATCGCACTCATTGACGACAAGATCGGGGAGCTTGAA
AAGTTAAAGACTAGTGGACTCGAATCGGGCAATTCGGATCCTGCAGCTAA
GTAGATGAGCGGACAGAACAAAGCGTTATATTCGGAGCCCAATGTACTGA
CTTCCTCTTTGAAGGTGGGAGCCGTGAGTGGTTCTGCTGGCCTCGTATAT
GGGGGAATATCAGGAGTAATTCGGTCCCCTCATCCGGTCATTCATTCTAT
CTCTTGCGGAATCCACTGGTTTGCATGTGGAGCCTCCTTTTGGTGGTTGA
GAAGCAACATTCTGAAGCTTCACTATGAAGACAAGGCTACCCCTAAGCAA
CGGGCTTATGTCAGCGCCCTCTCTGGAGGAGTTGCTGGAGGGGCCGTTAC
GAGGCTAATGGGCGGGCGACTTGTCCCTGGACTAGTTGTTTTTTCGCTAC
TAGGCTATGTCGGGCAAAGCTCTTATAATGCGATCGACACCTGGCAAATG
GAGAACGCGAATACGACGTCTAAGCCGTTCCTGCAGCGGATGGCCGACTC
CAAATGGATCCCGCTCAAGTCACTCTCGGATGACGATTACAGGGGTATTT
TGAACGAGAAAGTGTTGAGTATCGAGGCTGAAATCGCACTCATTGACGAC
AAGATCGGGGAGCTTGAAAAGTTAAAGACTAGTGGACTCGAATCGGGCAA
TTCGGATCCTGCAGCTAAGTAG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_004349-T1.utr5p1 | KJC3_004349-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_004349-T1.utr3p1 | KJC3_004349-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch3 | supercontig | ch3:4623065..4624760 + |
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