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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch3:4735681..4736262+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_004367-T1 ID=KJC3_004367-T1|Name=KJC3_004367-T1|organism=Aspergillus niger KJC3|type=mRNA|length=582bp|location=Sequence derived from alignment at ch3:4735681..4736262+ (Aspergillus niger KJC3)
ATGAAGCCTCTTGCCCCCGCCCTGCGTCCCAAGACTGCCGACAGCCGTAG
GCCATTCAGTGCCAATGTCTCTGAACCACCTATATTCCCCAGACAAAAGG
CCTCAACCGCCTGCCGCGAGTGCAAGCGCATGAGATGCAAAGTAGTATCC
CTTCTTCTCCCTACCCATGCCTTCCTGGTAACGTTAAATTCGAGCTAGTG
TTCCGTCGGAAACGGAACCACGGTGTGTGACCGATGCATCAAAAATCAGA
CCCTGTGTGTCTTCGACCTGGACGAGGATATGCGACGGAAGCTATTTCAC
AAGCGCAAGCTTAACGAACTGGAAGCAGAGCGTGATTTCCTGCAGCAGCT
GGTGAATACGCTGCGCGACAGCTCCGATGACAAGGCCCTGCAGCTGCTGG
GTCTCATTCGCAGTCAAGCACCCCCTGCCGAATTACAGCTCTACATCGAA
AATGCCATGACCGATGGGGATCGGCAGCAGAGTCCTGTTTGGGCCGACAT
GTATGACCGCACGCGGTCGCCGTCTAATACCCTAGACTTCCATCGCCCCT
CCCTGCATCGCGCTCCGACTATCAAGCGATAG back to topCoding sequence (CDS) from alignment at ch3:4735681..4736262+ >KJC3_004367-T1 ID=KJC3_004367-T1|Name=KJC3_004367-T1|organism=Aspergillus niger KJC3|type=CDS|length=1050bp|location=Sequence derived from alignment at ch3:4735681..4736262+ (Aspergillus niger KJC3)
ATGAAGCCTCTTGCCCCCGCCCTGCGTCCCAAGACTGCCGACAGCCGTAG
GCCATTCAGTGCCAATGTCTCTGAACCACCTATATTCCCCAGACAAAAGG
CCTCAACCGCCTGCCGCGAGTGCAAGCGCATGAGATGCAAATGTTCCGTC
GGAAACGGAACCACGGTGTGTGACCGATGCATCAAAAATCAGACCCTGTG
TGTCTTCGACCTGGACGAGGATATGCGACGGAAGCTATTTCACAAGCGCA
AGCTTAACGAACTGGAAGCAGAGCGTGATTTCCTGCAGCAGCTGGTGAAT
ACGCTGCGCGACAGCTCCGATGACAAGGCCCTGCAGCTGCTGGGTCTCAT
TCGCAGTCAAGCACCCCCTGCCGAATTACAGCTCTACATCGAAAATGCCA
TGACCGATGGGGATCGGCAGCAGAGTCCTGTTTGGGCCGACATGTATGAC
CGCACGCGGTCGCCGTCTAATACCCTAGACTTCCATCGCCCCTCCCTGCA
TCGCGCTCCGACTATCAAGCGATAGATGAAGCCTCTTGCCCCCGCCCTGC
GTCCCAAGACTGCCGACAGCCGTAGGCCATTCAGTGCCAATGTCTCTGAA
CCACCTATATTCCCCAGACAAAAGGCCTCAACCGCCTGCCGCGAGTGCAA
GCGCATGAGATGCAAATGTTCCGTCGGAAACGGAACCACGGTGTGTGACC
GATGCATCAAAAATCAGACCCTGTGTGTCTTCGACCTGGACGAGGATATG
CGACGGAAGCTATTTCACAAGCGCAAGCTTAACGAACTGGAAGCAGAGCG
TGATTTCCTGCAGCAGCTGGTGAATACGCTGCGCGACAGCTCCGATGACA
AGGCCCTGCAGCTGCTGGGTCTCATTCGCAGTCAAGCACCCCCTGCCGAA
TTACAGCTCTACATCGAAAATGCCATGACCGATGGGGATCGGCAGCAGAG
TCCTGTTTGGGCCGACATGTATGACCGCACGCGGTCGCCGTCTAATACCC
TAGACTTCCATCGCCCCTCCCTGCATCGCGCTCCGACTATCAAGCGATAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0042025 | host cell nucleus |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0008270 | zinc ion binding |
| GO:0000981 | DNA-binding transcription factor activity, RNA polymerase II-specific |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006355 | regulation of transcription, DNA-templated |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR036864 |
| DBxref | InterPro:IPR001138 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch3 | supercontig | ch3:4735681..4736262 + |
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