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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch3:4792004..4795588+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_004375-T3 ID=KJC3_004375-T3|Name=KJC3_004375-T3|organism=Aspergillus niger KJC3|type=mRNA|length=3585bp|location=Sequence derived from alignment at ch3:4792004..4795588+ (Aspergillus niger KJC3)
CCATCCTTGGGCCCCCGGGATAGCTTCGACGCTCCGGGTCAGATAGCGCT
TGGCGATCCGAATGCCGCATTTCCCCTCTTGCCGCCTCCCTGTCTTCTCC
TGGTTTCGAGTCTCTACAGGTCATACAGTGCCTGACGAACAACAGAACGG
AATAAGTCAAATGACTTGCCTCGGACACTGTTGACGATGTTCCGCAACAG
GTATGGTTGACATACCGGATGCCGACGATTCGCCGGCCATTCTCATACTG
ATCGGGATGTCACCCTTGCAGAAAGAATTCCCAGAAGCCAGACGACCTCC
TCATCCAGAAATTTCGAAAGACCTTCTCAGATATTGTTTCCCCAGTCGTC
CACCGCAATGCCACGCGCTTCGGTCAGACGCCCATTGGACCTATCACTCC
GACTAGGTAAAAATGCCTTTCAGCAGATGATAACCTGCTGCTACTTGTTG
TCCGTTTCCCATTCTTATTCATCAGAGACAATAGCCTGAAAAACTACGAT
CTGGGCGACAGCTAACATGATATTACTGCGCCAGGCGGGAAATGAATAAC
GATACGAAGCTCAGTGATTCTACGCCCCGCGCAACAGAAGACATGCGGTT
TCCAGCTCCCTATACCGATCCGAACGCTGTCTCTTATGTAATCCCGCTAC
AACCACATAGGAGCTCTACGCCCAATTCAGGTAGACTGGGTGCCGTGTAC
CATAGTCAAGCGGGGGAATTGCATTTTCCTGTGACGGGTCTGAGTATGAT
TACTCCGCTCTCTCTCCCGCAGCAGGTTTCTGCAGCTCCCGTCAACCCCG
AAACTGCAGCCTCAGGTCTTGATAACTTCGACCAGCAATATATTCCCCCA
CACTTCCATTGCCCCCAGCCGTTTGCTCAGCAGCCAACCTTTGCACCCAC
GGCTTTCGTTCAGAGTGATGCAGGTTACGATGCCATGGACGAGCCTGTTG
AAGAACACTCTCTAAACAATATGGATGTGCAGAGTAGCACGCCTTCTCAC
AACCTTGCATCATCAATTCAAGACGATCAAGCGAGCATTGCGAACCCAGG
TGAAACGTGAGCTATTAGAGCCTATCTCATTGCGTCTGTTTAACAGTGCT
TAACCGTTCTGGACACTGCAGTCTTCGCTATCGCATCACTTTGCGCGCAC
CTACAGCAATGATCAATGGCCAAGCCGAGATCCCAGTTACTTACCTTAAC
AAAGGCCAGGCGTACTCGGTGTCCGTGATTGATTCTACGCCGCCCCCCAT
GACTATGCGATCGATCAAATATCGAACCTATATCCGTGTGTCATTCCAAG
AAGAAGAGCAGAGGGCAAAGCCAGCTGTTTGTTGGCGACTATGGAAAGAA
GGTCGAGGTTCCGATGAAGCGCATCGACGAGGCGGCAAGCTCCAAGCAGT
GGAGTATGTCGATCCCATACAGGGAGGCATCAAAGAGACAAAGAACCGGC
AGGTCCAGCTCGAGAGCTCAGCATTCGATGGATTCTGCGTCACATGGACT
CGTAACCCGTCAACTGGGGCCTCAGAATGTTTGATACCTGTCCGGTTTAA
CTTCCTATCAACAGATTTCAGTCTGTCCAAGGGTGTCAAGGGTATTCCGG
TCAGATTGTGTGCGAAGACAGAAATGCTCTCCCCGGATTATGCGAGCTCA
AGCCCGAGCAGGAGGGCAGAGGTGTGCTACTGCAAGGTCAAGCTTTTCCG
CGACCATGGGGCTGAGCGGAAGCTCTCCTGTGATGTCGCTCATGTTAAGA
AGACCATCGAAAAGCTTCGACAACAGATTGCTCAAGCTGAGATGGGCCCC
GGTAACTGCGGCAAGCGTAAGCGTAGCAATGGCTTGGTTGCACTCAAGGG
CGCTGATCCCCGCCCAGCCAAAATCAGCAAGTATAAACGGGTACGGTCCG
TGGGCTCGCAGGACGGCCCTGGCAAAATGCGTTTGGAAGGCGATCTCCAT
GCGAAGCTTGCCTTAATGCAAGGTATGTTCACATCAACGCGGCCGGTAAG
CGTCCTAGGATTGCGGGGTGAAGAGCAAGACGACCCGGAGTTGTACCCTG
TCATGCTGCCCGAGTCGCGTGTTTTCGTCGAACAAGAGAACAGTCGCGGG
TCTCGGCTCAATATTGATGGTTCGTCTTTGCACGCCGTTTCACCTACCAG
CAGTAGCATCTCCGTGAGCTCGCCATTCCTTCCTACCAATCTGCAGTCGA
ATACGTTCTATTGCTCAGGGTACCATCGATCATTGACCACCTCCCGAGGA
AATTCACTACCATGCTCTGAAGTCCTGGGCGACATGGTCACGCTAAAGTA
TCCCGTCAAAGTACCGAAGTTCACTTCAACCGTCGGTAACGCCAACATGG
GATACATAGAGGCAGTAGACATTGACCCAAATTATCATCCACCGGCGGAG
CGACCAGTAATCTCAAGTTAAGTTACTGATTCGGTAACACCAAAGACAGG
CGAACTGACATCATCCTAGTCGCTTGTTTCTACGTACGATTTCCTTGTAA
CGATCGGCTTTCGGATGACTATTACCGGGCCGTCTATCTGACTGAGCGGA
CAGTTCGCGATCTGATCGAGAAGATTACCATAAAACAGCGCATTGATCCG
CAGCGTGTAGTGCGTGTCCTCCATGTCAAGCAAAATGGCCTCGAAATAAT
GGTGGATGATGATGTGCGCGAGCTTCCTGACGGCCAGGACATGATTGTTG
AAATGTCCGAGGTATCGTCATTCAAGAACGCCGCAGTTACGGGGCCAGGA
AATCCTAGTTCAGCCCTCGAGCTCAAATTAAGCTACTAATCCTGCCACCG
CATATTACAACGCTCTTTGTTTTCCTTTATCGCTCATAAGTCTTCGTTCC
GATTGAGCCTTGCTTGACCAGAAACAGAAGTGAACTTTCCCTTTCGCAGT
TGGCTTTCAATCTATGGGCGCCTGGTGCGTTGCGTGAGATACGCTTGGTC
GCATACATTGCTCAAGCGGCATGCCTTATTTTGGGGATTTGCTTGCGTCA
ATCGGGGGCGTTCCTTTGGGTACGGTTAATAAAAGTTCTCGGGAAATGAC
AACTTGTCGCCATATACGCGCTTTGTTGCCTTCCCCCTTCTTTATAGTCA
TATCTTGGACGATATCCTAAACGTTTCCTCGTCGGCAGCGTGGTCTGTGT
TGTAGGGGTTACACGACCCCAACAATGTTCTTGGTTTTATGATATTATGT
GGGTTGCATTTCCGAGGATCTGGCTGAGCTACGACAAACAGAAACTAGAT
ATGCTGTCCGTTCCTGTCGTAAATACTTCTCTCCTGCAGTTGTATCTTTC
ATAGTGGAAGGTCTCAGACAATCTCCCTTCTGGGATCGCTGATTGTTTCC
GTTTTCGGATTTGCTGTGTCGGCTACCTACTCTTATGATCCAAGCATTAC
ACCTTTCCGCAAGCGCTCTCAGCATTTGCGCAGATTGCCCTTTGCTTGTT
ATGTGCGCCATTTTGAGTCTTGCGTGTTAACCCGCTTATACTTTGAACCC
GATAGAAACGGAGGGGTTGAAGCTGCCATTCGCGTCACATCAAAAACACT
AATTGGATACGCGAAGAACCCGCGCAAATAAGGAG back to topCoding sequence (CDS) from alignment at ch3:4792004..4795588+ >KJC3_004375-T3 ID=KJC3_004375-T3|Name=KJC3_004375-T3|organism=Aspergillus niger KJC3|type=CDS|length=5211bp|location=Sequence derived from alignment at ch3:4792004..4795588+ (Aspergillus niger KJC3)
ATGGACGAGCCTGTTGAAGAACACTCTCTAAACAATATGGATGTGCAGAG
TAGCACGCCTTCTCACAACCTTGCATCATCAATTCAAGACGATCAAGCGA
GCATTGCGAACCCAGGTGAAACTCTTCGCTATCGCATCACTTTGCGCGCA
CCTACAGCAATGATCAATGGCCAAGCCGAGATCCCAGTTACTTACCTTAA
CAAAGGCCAGGCGTACTCGGTGTCCGTGATTGATTCTACGCCGCCCCCCA
TGACTATGCGATCGATCAAATATCGAACCTATATCCGTGTGTCATTCCAA
GAAGAAGAGCAGAGGGCAAAGCCAGCTGTTTGTTGGCGACTATGGAAAGA
AGGTCGAGGTTCCGATGAAGCGCATCGACGAGGCGGCAAGCTCCAAGCAG
TGGAGTATGTCGATCCCATACAGGGAGGCATCAAAGAGACAAAGAACCGG
CAGGTCCAGCTCGAGAGCTCAGCATTCGATGGATTCTGCGTCACATGGAC
TCGTAACCCGTCAACTGGGGCCTCAGAATGTTTGATACCTGTCCGGTTTA
ACTTCCTATCAACAGATTTCAGTCTGTCCAAGGGTGTCAAGGGTATTCCG
GTCAGATTGTGTGCGAAGACAGAAATGCTCTCCCCGGATTATGCGAGCTC
AAGCCCGAGCAGGAGGGCAGAGGTGTGCTACTGCAAGGTCAAGCTTTTCC
GCGACCATGGGGCTGAGCGGAAGCTCTCCTGTGATGTCGCTCATGTTAAG
AAGACCATCGAAAAGCTTCGACAACAGATTGCTCAAGCTGAGATGGGCCC
CGGTAACTGCGGCAAGCGTAAGCGTAGCAATGGCTTGGTTGCACTCAAGG
GCGCTGATCCCCGCCCAGCCAAAATCAGCAAGTATAAACGGGTACGGTCC
GTGGGCTCGCAGGACGGCCCTGGCAAAATGCGTTTGGAAGGCGATCTCCA
TGCGAAGCTTGCCTTAATGCAAGGTATGTTCACATCAACGCGGCCGGTAA
GCGTCCTAGGATTGCGGGGTGAAGAGCAAGACGACCCGGAGTTGTACCCT
GTCATGCTGCCCGAGTCGCGTGTTTTCGTCGAACAAGAGAACAGTCGCGG
GTCTCGGCTCAATATTGATGGTTCGTCTTTGCACGCCGTTTCACCTACCA
GCAGTAGCATCTCCGTGAGCTCGCCATTCCTTCCTACCAATCTGCAGTCG
AATACGTTCTATTGCTCAGGGTACCATCGATCATTGACCACCTCCCGAGG
AAATTCACTACCATGCTCTGAAGTCCTGGGCGACATGGTCACGCTAAAGT
ATCCCGTCAAAGTACCGAAGTTCACTTCAACCGTCGGTAACGCCAACATG
GGATACATAGAGGCAGTAGACATTGACCCAAATTATCATCCACCGGCGGA
GCGACCAGTAATCTCAATCGCTTGTTTCTACGTACGATTTCCTTGTAACG
ATCGGCTTTCGGATGACTATTACCGGGCCGTCTATCTGACTGAGCGGACA
GTTCGCGATCTGATCGAGAAGATTACCATAAAACAGCGCATTGATCCGCA
GCGTGTAGTGCGTGTCCTCCATGTCAAGCAAAATGGCCTCGAAATAATGG
TGGATGATGATGTGCGCGAGCTTCCTGACGGCCAGGACATGATTGTTGAA
ATGTCCGAGGTATCGTCATTCAAGAACGCCGCAGTTACGGGGCCAGGAAA
TCCTAGTTCAGCCCTCGAGCTCAAATTAAGCTACTAAATGGACGAGCCTG
TTGAAGAACACTCTCTAAACAATATGGATGTGCAGAGTAGCACGCCTTCT
CACAACCTTGCATCATCAATTCAAGACGATCAAGCGAGCATTGCGAACCC
AGGTGAAACTCTTCGCTATCGCATCACTTTGCGCGCACCTACAGCAATGA
TCAATGGCCAAGCCGAGATCCCAGTTACTTACCTTAACAAAGGCCAGGCG
TACTCGGTGTCCGTGATTGATTCTACGCCGCCCCCCATGACTATGCGATC
GATCAAATATCGAACCTATATCCGTGTGTCATTCCAAGAAGAAGAGCAGA
GGGCAAAGCCAGCTGTTTGTTGGCGACTATGGAAAGAAGGTCGAGGTTCC
GATGAAGCGCATCGACGAGGCGGCAAGCTCCAAGCAGTGGAGTATGTCGA
TCCCATACAGGGAGGCATCAAAGAGACAAAGAACCGGCAGGTCCAGCTCG
AGAGCTCAGCATTCGATGGATTCTGCGTCACATGGACTCGTAACCCGTCA
ACTGGGGCCTCAGAATGTTTGATACCTGTCCGGTTTAACTTCCTATCAAC
AGATTTCAGTCTGTCCAAGGGTGTCAAGGGTATTCCGGTCAGATTGTGTG
CGAAGACAGAAATGCTCTCCCCGGATTATGCGAGCTCAAGCCCGAGCAGG
AGGGCAGAGGTGTGCTACTGCAAGGTCAAGCTTTTCCGCGACCATGGGGC
TGAGCGGAAGCTCTCCTGTGATGTCGCTCATGTTAAGAAGACCATCGAAA
AGCTTCGACAACAGATTGCTCAAGCTGAGATGGGCCCCGGTAACTGCGGC
AAGCGTAAGCGTAGCAATGGCTTGGTTGCACTCAAGGGCGCTGATCCCCG
CCCAGCCAAAATCAGCAAGTATAAACGGGTACGGTCCGTGGGCTCGCAGG
ACGGCCCTGGCAAAATGCGTTTGGAAGGCGATCTCCATGCGAAGCTTGCC
TTAATGCAAGGTATGTTCACATCAACGCGGCCGGTAAGCGTCCTAGGATT
GCGGGGTGAAGAGCAAGACGACCCGGAGTTGTACCCTGTCATGCTGCCCG
AGTCGCGTGTTTTCGTCGAACAAGAGAACAGTCGCGGGTCTCGGCTCAAT
ATTGATGGTTCGTCTTTGCACGCCGTTTCACCTACCAGCAGTAGCATCTC
CGTGAGCTCGCCATTCCTTCCTACCAATCTGCAGTCGAATACGTTCTATT
GCTCAGGGTACCATCGATCATTGACCACCTCCCGAGGAAATTCACTACCA
TGCTCTGAAGTCCTGGGCGACATGGTCACGCTAAAGTATCCCGTCAAAGT
ACCGAAGTTCACTTCAACCGTCGGTAACGCCAACATGGGATACATAGAGG
CAGTAGACATTGACCCAAATTATCATCCACCGGCGGAGCGACCAGTAATC
TCAATCGCTTGTTTCTACGTACGATTTCCTTGTAACGATCGGCTTTCGGA
TGACTATTACCGGGCCGTCTATCTGACTGAGCGGACAGTTCGCGATCTGA
TCGAGAAGATTACCATAAAACAGCGCATTGATCCGCAGCGTGTAGTGCGT
GTCCTCCATGTCAAGCAAAATGGCCTCGAAATAATGGTGGATGATGATGT
GCGCGAGCTTCCTGACGGCCAGGACATGATTGTTGAAATGTCCGAGGTAT
CGTCATTCAAGAACGCCGCAGTTACGGGGCCAGGAAATCCTAGTTCAGCC
CTCGAGCTCAAATTAAGCTACTAAATGGACGAGCCTGTTGAAGAACACTC
TCTAAACAATATGGATGTGCAGAGTAGCACGCCTTCTCACAACCTTGCAT
CATCAATTCAAGACGATCAAGCGAGCATTGCGAACCCAGGTGAAACTCTT
CGCTATCGCATCACTTTGCGCGCACCTACAGCAATGATCAATGGCCAAGC
CGAGATCCCAGTTACTTACCTTAACAAAGGCCAGGCGTACTCGGTGTCCG
TGATTGATTCTACGCCGCCCCCCATGACTATGCGATCGATCAAATATCGA
ACCTATATCCGTGTGTCATTCCAAGAAGAAGAGCAGAGGGCAAAGCCAGC
TGTTTGTTGGCGACTATGGAAAGAAGGTCGAGGTTCCGATGAAGCGCATC
GACGAGGCGGCAAGCTCCAAGCAGTGGAGTATGTCGATCCCATACAGGGA
GGCATCAAAGAGACAAAGAACCGGCAGGTCCAGCTCGAGAGCTCAGCATT
CGATGGATTCTGCGTCACATGGACTCGTAACCCGTCAACTGGGGCCTCAG
AATGTTTGATACCTGTCCGGTTTAACTTCCTATCAACAGATTTCAGTCTG
TCCAAGGGTGTCAAGGGTATTCCGGTCAGATTGTGTGCGAAGACAGAAAT
GCTCTCCCCGGATTATGCGAGCTCAAGCCCGAGCAGGAGGGCAGAGGTGT
GCTACTGCAAGGTCAAGCTTTTCCGCGACCATGGGGCTGAGCGGAAGCTC
TCCTGTGATGTCGCTCATGTTAAGAAGACCATCGAAAAGCTTCGACAACA
GATTGCTCAAGCTGAGATGGGCCCCGGTAACTGCGGCAAGCGTAAGCGTA
GCAATGGCTTGGTTGCACTCAAGGGCGCTGATCCCCGCCCAGCCAAAATC
AGCAAGTATAAACGGGTACGGTCCGTGGGCTCGCAGGACGGCCCTGGCAA
AATGCGTTTGGAAGGCGATCTCCATGCGAAGCTTGCCTTAATGCAAGGTA
TGTTCACATCAACGCGGCCGGTAAGCGTCCTAGGATTGCGGGGTGAAGAG
CAAGACGACCCGGAGTTGTACCCTGTCATGCTGCCCGAGTCGCGTGTTTT
CGTCGAACAAGAGAACAGTCGCGGGTCTCGGCTCAATATTGATGGTTCGT
CTTTGCACGCCGTTTCACCTACCAGCAGTAGCATCTCCGTGAGCTCGCCA
TTCCTTCCTACCAATCTGCAGTCGAATACGTTCTATTGCTCAGGGTACCA
TCGATCATTGACCACCTCCCGAGGAAATTCACTACCATGCTCTGAAGTCC
TGGGCGACATGGTCACGCTAAAGTATCCCGTCAAAGTACCGAAGTTCACT
TCAACCGTCGGTAACGCCAACATGGGATACATAGAGGCAGTAGACATTGA
CCCAAATTATCATCCACCGGCGGAGCGACCAGTAATCTCAATCGCTTGTT
TCTACGTACGATTTCCTTGTAACGATCGGCTTTCGGATGACTATTACCGG
GCCGTCTATCTGACTGAGCGGACAGTTCGCGATCTGATCGAGAAGATTAC
CATAAAACAGCGCATTGATCCGCAGCGTGTAGTGCGTGTCCTCCATGTCA
AGCAAAATGGCCTCGAAATAATGGTGGATGATGATGTGCGCGAGCTTCCT
GACGGCCAGGACATGATTGTTGAAATGTCCGAGGTATCGTCATTCAAGAA
CGCCGCAGTTACGGGGCCAGGAAATCCTAGTTCAGCCCTCGAGCTCAAAT
TAAGCTACTAA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_004375-T3.utr3p1 | KJC3_004375-T3.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR007604 |
| DBxref | PFAM:PF04516 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch3 | supercontig | ch3:4792004..4795588 + |
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