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KJC3_004379-T1, KJC3_004379-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_004379-T1
Unique NameKJC3_004379-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch3:4805460..4807331+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_004379-T1 ID=KJC3_004379-T1|Name=KJC3_004379-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1872bp|location=Sequence derived from alignment at ch3:4805460..4807331+ (Aspergillus niger KJC3)
CCCTAGTGATCTCCTATCTTCTAGAGCTGTTGTGCCAGGAGAATGTGTCT
TCCCGTCCTTCATCCCTTGGCTGGCGTGTCTTCCATGGTTTTTAAAACAA
TCTTGGAATTCCATCTGTGGCTATCATTGAAACAAGGGGTTTATCTGGGA
ACGAGGTCCCGCACTCCAAACACCCCTTGGGCACCTGCATGCCCGCCCTG
GCATGCAACGGTTGCCAAGGAATGGGCCTTACAGCACACTGTTGATGGAA
GCTTTTGCTGTTGTTGTGAAAAACCTAACATGCCCTGGGTGCATTCCAGC
TCTAACCCTGGTTTCTCGGTATCCAGGTTTCCTTTCCCCGTGCCGGTCAG
TCATAGCTAACATAGCAGCGAGGTATATCTAAGTGGAAGATAACATGTTT
AGCAGGAGAGTATTCCTCCTAGAATGAGCTTGCCAGGCTAGTGGGCCTAG
TTGACAAGTTCTGTCCCATTTTCTGCACAACGCAATAGCATCCCCGCCTT
GCCGATCGGGCTCGCCATTGATGGCGTCTTCTCGATGCTAAGGTACACCA
ACCAGGAATCCTGTTAAACTCCCCCGAGTCGAAACCACCATACCATAAAA
CAGAAAGCTGGAGGCAAGGACCCAGTTGGAGCCTACCTCTTCTTATATTT
CAATGGGGTTTTGTCAGATAATCTCCACAACTTTTTGGACGGGAACAAGT
TAACCGGTTGGCAAATCTGCATCGTTACACAAATGTTCAGGGTATGTTGA
AATGCCGTAGTTAGCCATTAACTAGACGTTGTTCAAGTTATATTAATGAT
CTCCTTCCTTTTCTTCTGAAAGCCGTATTTTTTTCAGCTTCGAAATCGGT
ATCGTTAGGCAGCCACAACGAAAAGAAACATGCACATTCTCTGGGCCCTC
GTTCCAAGCTATATTTCTCTAGCGACAGCATCGTCATGCTACGCACCTGA
TGGATCACAAGTGGCCAGCTTCATATATCAGCCATGCGTCTCCATTTCAG
GTGTACATTCAATGTGCTGTAAAATCAATGCCGAGGATCCTGATACGTGT
GATCCCTCGGGACTTTGCCTGACGAGTGAAGGAACATATTATCGGGAGTT
CTGCACGGATCGATCATGGAACTCGACTAATTGTTTACCCAAGGATATCT
GTGACAATCAGGTTAGCCTCCACTTTGTGCAGCAAATTTGTGAGCAACTA
ATAATACCGGTAGAATGGTGGAAACTCAGACTGGACCTACCAATTGACCA
ACTGCGGCGACGGCTCCTGGTGCTGCGGTAGTACCGCTGCCTGCTGCAAC
ACTTACGAGACATTCACTCTGGACTCGGCACTCATCAAGTTTACCTCCGA
TTCAGATTCCAATTCAAATTCTAGTTCCAAGTCCGGTTCTGCTTCCGATA
CTTCTGTTACCTCTGCTCCCTCGACAACAGGAACTGGAATTCTATCCGGT
GACAGTAGCAGCGGCAGCATCAGCCGCGAAAAGGACCAGTCCAATTCCGA
TGAGCCGAAGAAGATTGCGATTGGAGTCGGAGTTGGAATACCGCTAGCAT
GCATAGCCGTGGCTATGATGGGGGTTGGATATTTCTGGGGCAGAAGGAGT
ATGAAGAAGGAGTTGCAGCCGAGATTCCAACCTCGTATTCTAAATATCCC
CCTGGAGAAGCCAAAGGGCGAGATAGGGCGCCCGCGTCCGGAGAATGATG
CTTCTAGCGTGTCTCGTTGTCTGGAGGTAGTGCGGAGCGCATAAGCATGA
GATGAAGAGGAGGTTGAAAGGAGTCCTTGTGGCTTGTGGGTGCTGTCTGT
TGTATCACTGCGGTTCGCTGGTTTTGACTTAGCGGGGCCATTGCTGTCCC
CGGTAGCGTGTCTCAATATCCC
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Coding sequence (CDS) from alignment at ch3:4805460..4807331+

>KJC3_004379-T1 ID=KJC3_004379-T1|Name=KJC3_004379-T1|organism=Aspergillus niger KJC3|type=CDS|length=1626bp|location=Sequence derived from alignment at ch3:4805460..4807331+ (Aspergillus niger KJC3)
ATGCACATTCTCTGGGCCCTCGTTCCAAGCTATATTTCTCTAGCGACAGC
ATCGTCATGCTACGCACCTGATGGATCACAAGTGGCCAGCTTCATATATC
AGCCATGCGTCTCCATTTCAGGTGTACATTCAATGTGCTGTAAAATCAAT
GCCGAGGATCCTGATACGTGTGATCCCTCGGGACTTTGCCTGACGAGTGA
AGGAACATATTATCGGGAGTTCTGCACGGATCGATCATGGAACTCGACTA
ATTGTTTACCCAAGGATATCTGTGACAATCAGAATGGTGGAAACTCAGAC
TGGACCTACCAATTGACCAACTGCGGCGACGGCTCCTGGTGCTGCGGTAG
TACCGCTGCCTGCTGCAACACTTACGAGACATTCACTCTGGACTCGGCAC
TCATCAAGTTTACCTCCGATTCAGATTCCAATTCAAATTCTAGTTCCAAG
TCCGGTTCTGCTTCCGATACTTCTGTTACCTCTGCTCCCTCGACAACAGG
AACTGGAATTCTATCCGGTGACAGTAGCAGCGGCAGCATCAGCCGCGAAA
AGGACCAGTCCAATTCCGATGAGCCGAAGAAGATTGCGATTGGAGTCGGA
GTTGGAATACCGCTAGCATGCATAGCCGTGGCTATGATGGGGGTTGGATA
TTTCTGGGGCAGAAGGAGTATGAAGAAGGAGTTGCAGCCGAGATTCCAAC
CTCGTATTCTAAATATCCCCCTGGAGAAGCCAAAGGGCGAGATAGGGCGC
CCGCGTCCGGAGAATGATGCTTCTAGCGTGTCTCGTTGTCTGGAGGTAGT
GCGGAGCGCATAAATGCACATTCTCTGGGCCCTCGTTCCAAGCTATATTT
CTCTAGCGACAGCATCGTCATGCTACGCACCTGATGGATCACAAGTGGCC
AGCTTCATATATCAGCCATGCGTCTCCATTTCAGGTGTACATTCAATGTG
CTGTAAAATCAATGCCGAGGATCCTGATACGTGTGATCCCTCGGGACTTT
GCCTGACGAGTGAAGGAACATATTATCGGGAGTTCTGCACGGATCGATCA
TGGAACTCGACTAATTGTTTACCCAAGGATATCTGTGACAATCAGAATGG
TGGAAACTCAGACTGGACCTACCAATTGACCAACTGCGGCGACGGCTCCT
GGTGCTGCGGTAGTACCGCTGCCTGCTGCAACACTTACGAGACATTCACT
CTGGACTCGGCACTCATCAAGTTTACCTCCGATTCAGATTCCAATTCAAA
TTCTAGTTCCAAGTCCGGTTCTGCTTCCGATACTTCTGTTACCTCTGCTC
CCTCGACAACAGGAACTGGAATTCTATCCGGTGACAGTAGCAGCGGCAGC
ATCAGCCGCGAAAAGGACCAGTCCAATTCCGATGAGCCGAAGAAGATTGC
GATTGGAGTCGGAGTTGGAATACCGCTAGCATGCATAGCCGTGGCTATGA
TGGGGGTTGGATATTTCTGGGGCAGAAGGAGTATGAAGAAGGAGTTGCAG
CCGAGATTCCAACCTCGTATTCTAAATATCCCCCTGGAGAAGCCAAAGGG
CGAGATAGGGCGCCCGCGTCCGGAGAATGATGCTTCTAGCGTGTCTCGTT
GTCTGGAGGTAGTGCGGAGCGCATAA
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_004379KJC3_004379Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_004379-T1KJC3_004379-T1-proteinAspergillus niger KJC3polypeptide


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_004379-T1.utr5p1KJC3_004379-T1.utr5p1Aspergillus niger KJC3five_prime_UTR
KJC3_004379-T1.utr5p2KJC3_004379-T1.utr5p2Aspergillus niger KJC3five_prime_UTR
KJC3_004379-T1.utr5p3KJC3_004379-T1.utr5p3Aspergillus niger KJC3five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_004379-T1.exon1KJC3_004379-T1.exon1Aspergillus niger KJC3exon
KJC3_004379-T1.exon2KJC3_004379-T1.exon2Aspergillus niger KJC3exon
KJC3_004379-T1.exon3KJC3_004379-T1.exon3Aspergillus niger KJC3exon
KJC3_004379-T1.exon4KJC3_004379-T1.exon4Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_004379-T1.cdsKJC3_004379-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_004379-T1.utr3p1KJC3_004379-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


Properties
Property NameValue
NoteSECRETED:SignalP(1-17)
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch3supercontigch3:4805460..4807331 +
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