|
|
Sequences
The following sequences are available for this feature:
mRNA from alignment at ch3:4983763..4985654+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_004391-T1 ID=KJC3_004391-T1|Name=KJC3_004391-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1892bp|location=Sequence derived from alignment at ch3:4983763..4985654+ (Aspergillus niger KJC3)
TTGTCTATGGTGGAAGTCACGTGGACGCTATGTACAAATCAAGGGGCAAG
AGATATGATCCGCAACAACTTCCCCAGATAAACACCATTCACCACGTTTG
ACACACTTATACCGTCCGACCCAGATGCCGTCCGCTTTTTTCCAGGAACA
TGAGCCCTTTTTCGAGTTTAAGTCATATACTGAAAATGAGGACTTCCTTG
TTGAGGGGAAGCCAGAGCCCAGCAGCCGTTCCCAAACCTTGATCGTTCGT
CTTGCAAACCTCAGCTGGTGGGTCAAGGTGACTCTCAGAGGCGAAACCCT
CCGTGTAACGGAGAGGCAGGCCACCGAGCAGGTCGGAAAGCAAAAGACCT
TAAAACGACAGAGGCGCAAAGAGTACCAGGACTTCATCAGCCTTATCGAT
TTCAGATCTCTTCCACTTCTCGATGACACAGTCAGTGAGGTGATATTAGA
AGAATCAAGCGATCGATCTGATGCCACAGTGAAAATACGTGGAACGGCGG
AACTCGCCGTTAGTCCATTTGCAAACCTCTCCAGGAAACTGAAATACACT
GTCCGGGAAGATCCGTCGAGAGTCATTTATCCTCTACGTGATGAATTTCC
TTCTCTTAGGACGTTCGAAGTCACCGAGTTACTTGAGCAAACGGAGATCA
CAGACGGTGTTTTCCGCGTTATCGGAGCGCATGACAAGACGCCATACATT
CTTAAGGTTGTCAATCGGCCCTTTTACCAGCCGCATGACACAGAAGTCAT
TCGCACCGAGCTCAGAAATTTAATATATTTCCAAGGAAAACCGAACATTG
TCCAACCAGCTGGTATTGCGGTGTTCTCCAATCCTTATGCGACGTCAGAT
GTGACAGAACAGCCTTTGGTTATATTTGGCATTCTCCAGGTATTCTACTC
TGGTGGTTCTTTACAAAACCTATTCGATGAGGGTCACCTGCATGAACATC
CATGGGGACGTTGGACTACGCAAATTGCTGCTGCAGTTAACTGCTTGCAT
GAGGCAGGGAAAACTCACATGGATATCAAGCCATCAAATGTCGTTATTGA
CGAAAACGGAAACGCGGTGCTGATTGATATCAGCGGCGTTGGCGGAATCA
CTCATGAATGGCGCGCCCCTGAGATCCGAGACGAGATATCACCCGGGTAT
CTCTCATTTGAGGTGCGGCGGCTGAACGACACATGGGCATACGGGAAGCT
TTTGTCGGAAATCGTATCGCATGGAGGAAGCAGTCCGTTTTCAGAAACAT
TGGATCAGGTTGTTGCTTGCCTTACAAGGGAAGATACAGTGGCCCGCATG
ACTCTTTCCGAAGCCATTTCACGCCTAAGGACTTCTGGTATTGATAGAAC
ATGCAGTATATACAAGAAGCACAAATACAGTCATGGCAATGGCAGAATAT
AATCTTCCGCTGTTGCCATAACTGATGCCCATGATCGGCTCAATAGTCAT
CCCAATCAATATCGTCTTCATCGAATCCACCATCCGTTCTGAGGCCTATG
TTCGTAAGCGGGAAGCCAGCAATCGAGATGAACGGTTGTATCACATACCG
GGACCCTCCCTCTTAAGGTTTGGTTTCTGGTCGCATCCACTTATGCCACA
GTACGGAGTGCCGCTTGTGGAAGCGTCTTCGGTAGTCCCACTGGCGCATA
CTTTCTTTTTGGATTTCGCATCTTTGCATGGTTTTTTGAGTGATTTGTGG
TAGTGACCACAATTATGCACCCTAACTCTGAAGCTGCACATTGCAATAGG
CAATAGTAGATGGGTTCCGACAGTACTCCAGGTCAAACACAATTGCTATC
ATGATCAGGTCTAGGCGGAAGGACCACCAGCTAAGTACAACCTTCCCCGC
CCCTTTCCCCTCACTCCAGTGGTGAATATGCAGGCTTATCAC back to topCoding sequence (CDS) from alignment at ch3:4983763..4985654+ >KJC3_004391-T1 ID=KJC3_004391-T1|Name=KJC3_004391-T1|organism=Aspergillus niger KJC3|type=CDS|length=1278bp|location=Sequence derived from alignment at ch3:4983763..4985654+ (Aspergillus niger KJC3)
ATGCCGTCCGCTTTTTTCCAGGAACATGAGCCCTTTTTCGAGTTTAAGTC
ATATACTGAAAATGAGGACTTCCTTGTTGAGGGGAAGCCAGAGCCCAGCA
GCCGTTCCCAAACCTTGATCGTTCGTCTTGCAAACCTCAGCTGGTGGGTC
AAGGTGACTCTCAGAGGCGAAACCCTCCGTGTAACGGAGAGGCAGGCCAC
CGAGCAGGTCGGAAAGCAAAAGACCTTAAAACGACAGAGGCGCAAAGAGT
ACCAGGACTTCATCAGCCTTATCGATTTCAGATCTCTTCCACTTCTCGAT
GACACAGTCAGTGAGGTGATATTAGAAGAATCAAGCGATCGATCTGATGC
CACAGTGAAAATACGTGGAACGGCGGAACTCGCCGTTAGTCCATTTGCAA
ACCTCTCCAGGAAACTGAAATACACTGTCCGGGAAGATCCGTCGAGAGTC
ATTTATCCTCTACGTGATGAATTTCCTTCTCTTAGGACGTTCGAAGTCAC
CGAGTTACTTGAGCAAACGGAGATCACAGACGGTGTTTTCCGCGTTATCG
GAGCGCATGACAAGACGCCATACATTCTTAAGGTTGTCAATCGGCCCTTT
TACCAGCCGCATGACACAGAAGTCATTCGCACCGAGCTCAGAAATTTAAT
ATATTTCCAAGGAAAACCGAACATTGTCCAACCAGCTGGTATTGCGGTGT
TCTCCAATCCTTATGCGACGTCAGATGTGACAGAACAGCCTTTGGTTATA
TTTGGCATTCTCCAGGTATTCTACTCTGGTGGTTCTTTACAAAACCTATT
CGATGAGGGTCACCTGCATGAACATCCATGGGGACGTTGGACTACGCAAA
TTGCTGCTGCAGTTAACTGCTTGCATGAGGCAGGGAAAACTCACATGGAT
ATCAAGCCATCAAATGTCGTTATTGACGAAAACGGAAACGCGGTGCTGAT
TGATATCAGCGGCGTTGGCGGAATCACTCATGAATGGCGCGCCCCTGAGA
TCCGAGACGAGATATCACCCGGGTATCTCTCATTTGAGGTGCGGCGGCTG
AACGACACATGGGCATACGGGAAGCTTTTGTCGGAAATCGTATCGCATGG
AGGAAGCAGTCCGTTTTCAGAAACATTGGATCAGGTTGTTGCTTGCCTTA
CAAGGGAAGATACAGTGGCCCGCATGACTCTTTCCGAAGCCATTTCACGC
CTAAGGACTTCTGGTATTGATAGAACATGCAGTATATACAAGAAGCACAA
ATACAGTCATGGCAATGGCAGAATATAA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006468 | protein phosphorylation |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0004672 | protein kinase activity |
| GO:0005524 | ATP binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_004391-T1.utr5p1 | KJC3_004391-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_004391-T1.utr3p1 | KJC3_004391-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR011009 |
| DBxref | InterPro:IPR000719 |
| DBxref | PFAM:PF07714 |
| DBxref | PFAM:PF00069 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch3 | supercontig | ch3:4983763..4985654 + |
|
