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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch3:5107094..5109086+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_004402-T1 ID=KJC3_004402-T1|Name=KJC3_004402-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1993bp|location=Sequence derived from alignment at ch3:5107094..5109086+ (Aspergillus niger KJC3)
CAGACTTTACATAAACGCTCATCTCCAGTCGTCAGCTATCTGTTCCCGCT
ACTTCATGCAAGGCCCGCATACAATATGCACTCAATAGATTCAATCCTAG
ATGCGGCTACTATTCTTTCTCGCATATCAGATATCGATCGAGAAAATTTG
CTCGCTCATCGAGCCAAGCTTGAGGCTGCGTTTCGCAACTTGAAATCTTT
GTTGAAAGCAAGCGATGGTATGTGACGCTAAGCTGGACACCCGATCCTAG
AAACTAAATGTCCATTAGAAATCGCGAGCGGTAGAAGCCTCCTGGGCTTC
CTGGAGAGAAATGAGGGAACTATCAGAGAATGGTTCAGAAATGCTGGTGA
GTCAGACAACAAGAGCGAGGGAGACTGGGTAGATGAAGATCCCCGAATCG
TGGATCTGTCCATTGTCGACCAAGAGAGTTCTCTTGACGAGAGGTTTCGG
GCCGGTCTAAGTGCAATCAATTTGGCGTCCACGTATATGACATGGGAACA
GAATCGGCTCAAAACTGTGAAGCGGAGGAGAAAGACGAGAGTGGATGCGC
TGTGTGATAATCTGGGCGCTGGAAACAGATCGACCTTCTACAAGGAATAC
GTTGATGCGTCCGACAACTTCCGAGACAAGGAGAAGGCGAAGAATTACAT
CGAGTATGGTGTTAAGTCTCTTGTCTTTGGCAGGATGTTCGTACGCCATA
TGCAGGTGTATGCTGGCGATATGTCTACGGACGTCCATCTTGGTGTGCTC
GGGATACTATTTCTAACGACTTATTTTCGGCGCGTAACTTATCCCAATAT
CCCGCTGCTTGTTAACGCTATACTCTCGTCTGATTGGGGAAAGCTCGCTG
AGGAGAAGACTGAATGGGTGTCTTCTCGACTGAAACAGAACGACGGTAAG
CTCCACAGAAAATAGTCCCGACCGTCCCTCCTGACATGTCCCCAGATCGC
ATCCAACGAGTTCTTGCTCATAGAGGCAGGAAACACGACCTGGAGGAAGA
GAATCCTTATACACATCGTAACAAACGTTCGCGGAACGAAGACATTGTTG
CGGTTATCTCAAACAATGCTGCGCTACAGTACTCCCTTATCAATCCCCTG
GAGGTTGATCCTCTTGGACTGCCCTTTTTCGACGACACCCCGGGCCGCAA
TTTGAACTCAACATGTTCGGATGAACATCCACAATCGCAGGAGCACATTG
TGCAAAATTACGCACAAGTGGACCCTCTTGAACGACCACACTTTGGGACT
TCTATACCGCAGAATACCCCTCCATTAGGGCTCCTAAACAGTCCTCCTGC
TATTCCATCTGATCAGCTAGATGCAGAAGTAGCGAGCTTTCTTGCCAACT
TGAGAGAAAATGGCGACAGTACAAGCAACGGGACTGGAAACACAGTGGCG
TGCATGGTCTAGAATTCCGGTCGTGAATTGTTCCTTTTTTGAAGCGCGGC
AATGACGATATCCCAATCTTCCCCAATGAACAACTGTGGTTCTTTGATGC
AGTACGCGTTGCCCTGTAAAAGTGCTTCACCAGAGGCGAAGCTTATTGTT
CCATTGACTGGGATAAGAAGCGCAAAATCGGTAGGAGTAAGGACTCGAGC
ATTTTTGACGAAGTGGAAGGCGTTACAGTTCAGAACCTGGGCTATCAGAT
GCAATGAACTCGAATAACGTCAATATAAACTTACTGTATAACCAGACTTA
TCTATCTCAGCATTTAAATTCTCGATCTCTTTCACAAGCTCCTTGCCTTC
ATATTGCCATGCCTCTCCGGGCTTGTGCTCCCCAACGCTCAGCTTCTTCT
CCTCGATTAAAACCTTTATTCGTGATATGATCCTATTAACCTCTTGTTGG
TCCAAATCCATCGTGGCGCGTCAATATCAGGCAACGGGGTGATGAGAAAG
TAGGGAGTGATGGTAATTACGGAAAAGAGGAAGTGAAAACCTGAACATAT
GAGGGGTTGCTGAGTGGGGTGTGGGCGCCCGACCAAATGGTAT back to topCoding sequence (CDS) from alignment at ch3:5107094..5109086+ >KJC3_004402-T1 ID=KJC3_004402-T1|Name=KJC3_004402-T1|organism=Aspergillus niger KJC3|type=CDS|length=3708bp|location=Sequence derived from alignment at ch3:5107094..5109086+ (Aspergillus niger KJC3)
ATGCACTCAATAGATTCAATCCTAGATGCGGCTACTATTCTTTCTCGCAT
ATCAGATATCGATCGAGAAAATTTGCTCGCTCATCGAGCCAAGCTTGAGG
CTGCGTTTCGCAACTTGAAATCTTTGTTGAAAGCAAGCGATGAAATCGCG
AGCGGTAGAAGCCTCCTGGGCTTCCTGGAGAGAAATGAGGGAACTATCAG
AGAATGGTTCAGAAATGCTGGTGAGTCAGACAACAAGAGCGAGGGAGACT
GGGTAGATGAAGATCCCCGAATCGTGGATCTGTCCATTGTCGACCAAGAG
AGTTCTCTTGACGAGAGGTTTCGGGCCGGTCTAAGTGCAATCAATTTGGC
GTCCACGTATATGACATGGGAACAGAATCGGCTCAAAACTGTGAAGCGGA
GGAGAAAGACGAGAGTGGATGCGCTGTGTGATAATCTGGGCGCTGGAAAC
AGATCGACCTTCTACAAGGAATACGTTGATGCGTCCGACAACTTCCGAGA
CAAGGAGAAGGCGAAGAATTACATCGAGTATGGTGTTAAGTCTCTTGTCT
TTGGCAGGATGTTCGTACGCCATATGCAGGTGTATGCTGGCGATATGTCT
ACGGACGTCCATCTTGGTGTGCTCGGGATACTATTTCTAACGACTTATTT
TCGGCGCGTAACTTATCCCAATATCCCGCTGCTTGTTAACGCTATACTCT
CGTCTGATTGGGGAAAGCTCGCTGAGGAGAAGACTGAATGGGTGTCTTCT
CGACTGAAACAGAACGACGATCGCATCCAACGAGTTCTTGCTCATAGAGG
CAGGAAACACGACCTGGAGGAAGAGAATCCTTATACACATCGTAACAAAC
GTTCGCGGAACGAAGACATTGTTGCGGTTATCTCAAACAATGCTGCGCTA
CAGTACTCCCTTATCAATCCCCTGGAGGTTGATCCTCTTGGACTGCCCTT
TTTCGACGACACCCCGGGCCGCAATTTGAACTCAACATGTTCGGATGAAC
ATCCACAATCGCAGGAGCACATTGTGCAAAATTACGCACAAGTGGACCCT
CTTGAACGACCACACTTTGGGACTTCTATACCGCAGAATACCCCTCCATT
AGGGCTCCTAAACAGTCCTCCTGCTATTCCATCTGATCAGCTAGATGCAG
AAGTAGCGAGCTTTCTTGCCAACTTGAGAGAAAATGGCGACAGTACAAGC
AACGGGACTGGAAACACAGTGGCGTGCATGGTCTAGATGCACTCAATAGA
TTCAATCCTAGATGCGGCTACTATTCTTTCTCGCATATCAGATATCGATC
GAGAAAATTTGCTCGCTCATCGAGCCAAGCTTGAGGCTGCGTTTCGCAAC
TTGAAATCTTTGTTGAAAGCAAGCGATGAAATCGCGAGCGGTAGAAGCCT
CCTGGGCTTCCTGGAGAGAAATGAGGGAACTATCAGAGAATGGTTCAGAA
ATGCTGGTGAGTCAGACAACAAGAGCGAGGGAGACTGGGTAGATGAAGAT
CCCCGAATCGTGGATCTGTCCATTGTCGACCAAGAGAGTTCTCTTGACGA
GAGGTTTCGGGCCGGTCTAAGTGCAATCAATTTGGCGTCCACGTATATGA
CATGGGAACAGAATCGGCTCAAAACTGTGAAGCGGAGGAGAAAGACGAGA
GTGGATGCGCTGTGTGATAATCTGGGCGCTGGAAACAGATCGACCTTCTA
CAAGGAATACGTTGATGCGTCCGACAACTTCCGAGACAAGGAGAAGGCGA
AGAATTACATCGAGTATGGTGTTAAGTCTCTTGTCTTTGGCAGGATGTTC
GTACGCCATATGCAGGTGTATGCTGGCGATATGTCTACGGACGTCCATCT
TGGTGTGCTCGGGATACTATTTCTAACGACTTATTTTCGGCGCGTAACTT
ATCCCAATATCCCGCTGCTTGTTAACGCTATACTCTCGTCTGATTGGGGA
AAGCTCGCTGAGGAGAAGACTGAATGGGTGTCTTCTCGACTGAAACAGAA
CGACGATCGCATCCAACGAGTTCTTGCTCATAGAGGCAGGAAACACGACC
TGGAGGAAGAGAATCCTTATACACATCGTAACAAACGTTCGCGGAACGAA
GACATTGTTGCGGTTATCTCAAACAATGCTGCGCTACAGTACTCCCTTAT
CAATCCCCTGGAGGTTGATCCTCTTGGACTGCCCTTTTTCGACGACACCC
CGGGCCGCAATTTGAACTCAACATGTTCGGATGAACATCCACAATCGCAG
GAGCACATTGTGCAAAATTACGCACAAGTGGACCCTCTTGAACGACCACA
CTTTGGGACTTCTATACCGCAGAATACCCCTCCATTAGGGCTCCTAAACA
GTCCTCCTGCTATTCCATCTGATCAGCTAGATGCAGAAGTAGCGAGCTTT
CTTGCCAACTTGAGAGAAAATGGCGACAGTACAAGCAACGGGACTGGAAA
CACAGTGGCGTGCATGGTCTAGATGCACTCAATAGATTCAATCCTAGATG
CGGCTACTATTCTTTCTCGCATATCAGATATCGATCGAGAAAATTTGCTC
GCTCATCGAGCCAAGCTTGAGGCTGCGTTTCGCAACTTGAAATCTTTGTT
GAAAGCAAGCGATGAAATCGCGAGCGGTAGAAGCCTCCTGGGCTTCCTGG
AGAGAAATGAGGGAACTATCAGAGAATGGTTCAGAAATGCTGGTGAGTCA
GACAACAAGAGCGAGGGAGACTGGGTAGATGAAGATCCCCGAATCGTGGA
TCTGTCCATTGTCGACCAAGAGAGTTCTCTTGACGAGAGGTTTCGGGCCG
GTCTAAGTGCAATCAATTTGGCGTCCACGTATATGACATGGGAACAGAAT
CGGCTCAAAACTGTGAAGCGGAGGAGAAAGACGAGAGTGGATGCGCTGTG
TGATAATCTGGGCGCTGGAAACAGATCGACCTTCTACAAGGAATACGTTG
ATGCGTCCGACAACTTCCGAGACAAGGAGAAGGCGAAGAATTACATCGAG
TATGGTGTTAAGTCTCTTGTCTTTGGCAGGATGTTCGTACGCCATATGCA
GGTGTATGCTGGCGATATGTCTACGGACGTCCATCTTGGTGTGCTCGGGA
TACTATTTCTAACGACTTATTTTCGGCGCGTAACTTATCCCAATATCCCG
CTGCTTGTTAACGCTATACTCTCGTCTGATTGGGGAAAGCTCGCTGAGGA
GAAGACTGAATGGGTGTCTTCTCGACTGAAACAGAACGACGATCGCATCC
AACGAGTTCTTGCTCATAGAGGCAGGAAACACGACCTGGAGGAAGAGAAT
CCTTATACACATCGTAACAAACGTTCGCGGAACGAAGACATTGTTGCGGT
TATCTCAAACAATGCTGCGCTACAGTACTCCCTTATCAATCCCCTGGAGG
TTGATCCTCTTGGACTGCCCTTTTTCGACGACACCCCGGGCCGCAATTTG
AACTCAACATGTTCGGATGAACATCCACAATCGCAGGAGCACATTGTGCA
AAATTACGCACAAGTGGACCCTCTTGAACGACCACACTTTGGGACTTCTA
TACCGCAGAATACCCCTCCATTAGGGCTCCTAAACAGTCCTCCTGCTATT
CCATCTGATCAGCTAGATGCAGAAGTAGCGAGCTTTCTTGCCAACTTGAG
AGAAAATGGCGACAGTACAAGCAACGGGACTGGAAACACAGTGGCGTGCA
TGGTCTAG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_004402-T1.utr5p1 | KJC3_004402-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_004402-T1.utr3p1 | KJC3_004402-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch3 | supercontig | ch3:5107094..5109086 + |
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