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KJC3_004462-T1, KJC3_004462-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_004462-T1
Unique NameKJC3_004462-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch3:5344435..5344839-

Legend: CDSpolypeptideexonthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_004462-T1 ID=KJC3_004462-T1|Name=KJC3_004462-T1|organism=Aspergillus niger KJC3|type=mRNA|length=405bp|location=Sequence derived from alignment at ch3:5344435..5344839- (Aspergillus niger KJC3)
ATGCGCTTCACCTACCAAGCTCTCGCTGTCTTCATCAGCTCCCTCCTCGT
CAACAGCGCTGCGGCCCACGCCTGCGAGAGCAGCGCTGTCTGGCCCGATC
CCGCCGACTGCCACCATTTTTACCAGTGCAACCCGGGCACTGAGCCCGCC
CACAAGGTGTGCGGTGCTGGCACTGCCTTCAACCCCAAGATTAGCGCATG
CGACTACGAGCAGAACGTTCCTCCTTGCTTCAAGGACCCCCACCACCCTC
GCCCTTTCCACGCCTAGATGGCAAAATACTTTCCGACCAAAGTCACTCTT
TCACGGATATGTTTGAGTATAAGTGTACAGGCTTATACTGGAACATTTAA
TTTCTAATGTATCTCTAATTTGGGGGTCGACTATAAAATACCTTGAGAAA
AGTGG
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Coding sequence (CDS) from alignment at ch3:5344435..5344839-

>KJC3_004462-T1 ID=KJC3_004462-T1|Name=KJC3_004462-T1|organism=Aspergillus niger KJC3|type=CDS|length=267bp|location=Sequence derived from alignment at ch3:5344435..5344839- (Aspergillus niger KJC3)
ATGCGCTTCACCTACCAAGCTCTCGCTGTCTTCATCAGCTCCCTCCTCGT
CAACAGCGCTGCGGCCCACGCCTGCGAGAGCAGCGCTGTCTGGCCCGATC
CCGCCGACTGCCACCATTTTTACCAGTGCAACCCGGGCACTGAGCCCGCC
CACAAGGTGTGCGGTGCTGGCACTGCCTTCAACCCCAAGATTAGCGCATG
CGACTACGAGCAGAACGTTCCTCCTTGCTTCAAGGACCCCCACCACCCTC
GCCCTTTCCACGCCTAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005576extracellular region
Vocabulary: Molecular Function
TermDefinition
GO:0008061chitin binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_004462KJC3_004462Aspergillus niger KJC3gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_004462-T1.cdsKJC3_004462-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_004462-T1.utr3p1KJC3_004462-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_004462-T1.exon1KJC3_004462-T1.exon1Aspergillus niger KJC3exon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_004462-T1KJC3_004462-T1-proteinAspergillus niger KJC3polypeptide


Properties
Property NameValue
NoteSECRETED:SignalP(1-22)
DBxrefInterPro:IPR036508
DBxrefInterPro:IPR002557
DBxrefPFAM:PF01607
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch3supercontigch3:5344435..5344839 -
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