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KJC3_004511-T1, KJC3_004511-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_004511-T1
Unique NameKJC3_004511-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch3:5482862..5484080-

Legend: exonfive_prime_UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_004511-T1 ID=KJC3_004511-T1|Name=KJC3_004511-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1219bp|location=Sequence derived from alignment at ch3:5482862..5484080- (Aspergillus niger KJC3)
GTAGTAGCCAACTGCTCCCGCAACCTCTTCCAGGACCGACTACATACAAC
GAAGGCGTGTATCTCCATCTCATTGCGAACTTGCCGCCTAAGATTACCAT
AAAAGAACAAAATGCAAGCTATCAAGAATACTATTGCCGAGAACTTCGGC
GGTCCTTCTCACAATCTCGCAGAAGAGAAGTTTAATCTGGATGATGTGCC
CGACCTGAGCGGTAAGGTAGCGGTGGTTACCGGAGGTAGTGAAGGTATCC
TGCTTAATCTTCTCCCACAAGCCCGCCAACCCCCAGACCTGCAATTGGAA
GTTAACCGCCTTACAAACAATAGGGGTCGGTTTTGGCGTAACCCACATTC
TTCTTTCTAAGGGTATTTCGAAGCTTTTTGTGACTTCGCTCCGCAAGGAG
GTAGCCGATGATGCTATATCCGCCATTGAGGAAGAGTTCGGTCCCGAGAC
ACGCCGCCGCTTCATCTGGATCCAATGTGATCTATCGGATTGGGAACAGA
CTGCCAAGGTGGCAGCGGAGATTGCGTCGCAGACGGACCGCATCGACATA
CTTATCAATAATGCCGGCCGGGGCGTCATGACACGCCAGCTGGCTCCCAC
CAACGGGGTTGACCTGCACATGGCAGCCAACTACATGGGTCATGTCGTGC
TGACCTCGCACCTGCTGCCAACGCTGAAAAAAACGGCTGACGCTGGAAAC
ACCGTCCGTATTGTCAACCTCTCCTCCAATGTAGAAGGCAGCGCACCCAA
GGACACGGAATTCGCGTCCGTGGAGGAGCTGAACCGCGAATATAGCCCGA
CAGAGTTATACGGTCGGTCTAAACTGGCGGTGCTCCTGTACGCCAAGTGG
CTCCACGCCCATCTCCAACCTACACATCCCAATATCATTGTTAACGCAAC
TCACCCGGGGGTTGTCGATACGGCGCAGACAAATGTTCACATACACGAGG
CCCATCCCCTGCTCGGCTATGGCCTGTCCGCCGGCCTGAAGCCGTTTCGA
AAGACTCAGTTCCAGGGCGCCGTATCCACCATGTATGCGGCGACCATGGC
GACCGAGGGCGGGCAGTTCATCAATCCGCCACGAATTGTGGAGAAGGGCA
GTGCTAAGGCCAACGACATGGAGTTAGCTGACAGGCTGATGAAGTTGACA
GCTGAGGTGGTGGAGAAGAAAACACGGCCGCAGAGTAGCGCCAAGGGTTG
TCCATTCACCGAAGACTAG
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Coding sequence (CDS) from alignment at ch3:5482862..5484080-

>KJC3_004511-T1 ID=KJC3_004511-T1|Name=KJC3_004511-T1|organism=Aspergillus niger KJC3|type=CDS|length=2058bp|location=Sequence derived from alignment at ch3:5482862..5484080- (Aspergillus niger KJC3)
GGGTCGGTTTTGGCGTAACCCACATTCTTCTTTCTAAGGGTATTTCGAAG
CTTTTTGTGACTTCGCTCCGCAAGGAGGTAGCCGATGATGCTATATCCGC
CATTGAGGAAGAGTTCGGTCCCGAGACACGCCGCCGCTTCATCTGGATCC
AATGTGATCTATCGGATTGGGAACAGACTGCCAAGGTGGCAGCGGAGATT
GCGTCGCAGACGGACCGCATCGACATACTTATCAATAATGCCGGCCGGGG
CGTCATGACACGCCAGCTGGCTCCCACCAACGGGGTTGACCTGCACATGG
CAGCCAACTACATGGGTCATGTCGTGCTGACCTCGCACCTGCTGCCAACG
CTGAAAAAAACGGCTGACGCTGGAAACACCGTCCGTATTGTCAACCTCTC
CTCCAATGTAGAAGGCAGCGCACCCAAGGACACGGAATTCGCGTCCGTGG
AGGAGCTGAACCGCGAATATAGCCCGACAGAGTTATACGGTCGGTCTAAA
CTGGCGGTGCTCCTGTACGCCAAGTGGCTCCACGCCCATCTCCAACCTAC
ACATCCCAATATCATTGTTAACGCAACTCACCCGGGGGTTGTCGATACGG
CGCAGACAAATGTTCACATACACGAGGCCCATCCCCTGCTCGGCTATGGC
CTGTCCGCCGGCCTGAAGCCGTTTCGAAAGACTCAGTTCCAGGGCGCCGT
ATCCACCATGTATGCGGCGACCATGGCGACCGAGGGCGGGCAGTTCATCA
ATCCGCCACGAATTGTGGAGAAGGGCAGTGCTAAGGCCAACGACATGGAG
TTAGCTGACAGGCTGATGAAGTTGACAGCTGAGGTGGTGGAGAAGAAAAC
ACGGCCGCAGAGTAGCGCCAAGGGTTGTCCATTCACCGAAGACTAGATGC
AAGCTATCAAGAATACTATTGCCGAGAACTTCGGCGGTCCTTCTCACAAT
CTCGCAGAAGAGAAGTTTAATCTGGATGATGTGCCCGACCTGAGCGGTAA
GGTAGCGGTGGTTACCGGAGGTAGTGAAGGGGTCGGTTTTGGCGTAACCC
ACATTCTTCTTTCTAAGGGTATTTCGAAGCTTTTTGTGACTTCGCTCCGC
AAGGAGGTAGCCGATGATGCTATATCCGCCATTGAGGAAGAGTTCGGTCC
CGAGACACGCCGCCGCTTCATCTGGATCCAATGTGATCTATCGGATTGGG
AACAGACTGCCAAGGTGGCAGCGGAGATTGCGTCGCAGACGGACCGCATC
GACATACTTATCAATAATGCCGGCCGGGGCGTCATGACACGCCAGCTGGC
TCCCACCAACGGGGTTGACCTGCACATGGCAGCCAACTACATGGGTCATG
TCGTGCTGACCTCGCACCTGCTGCCAACGCTGAAAAAAACGGCTGACGCT
GGAAACACCGTCCGTATTGTCAACCTCTCCTCCAATGTAGAAGGCAGCGC
ACCCAAGGACACGGAATTCGCGTCCGTGGAGGAGCTGAACCGCGAATATA
GCCCGACAGAGTTATACGGTCGGTCTAAACTGGCGGTGCTCCTGTACGCC
AAGTGGCTCCACGCCCATCTCCAACCTACACATCCCAATATCATTGTTAA
CGCAACTCACCCGGGGGTTGTCGATACGGCGCAGACAAATGTTCACATAC
ACGAGGCCCATCCCCTGCTCGGCTATGGCCTGTCCGCCGGCCTGAAGCCG
TTTCGAAAGACTCAGTTCCAGGGCGCCGTATCCACCATGTATGCGGCGAC
CATGGCGACCGAGGGCGGGCAGTTCATCAATCCGCCACGAATTGTGGAGA
AGGGCAGTGCTAAGGCCAACGACATGGAGTTAGCTGACAGGCTGATGAAG
TTGACAGCTGAGGTGGTGGAGAAGAAAACACGGCCGCAGAGTAGCGCCAA
GGGTTGTCCATTCACCGAAGACTAGATGCAAGCTATCAAGAATACTATTG
CCGAGAACTTCGGCGGTCCTTCTCACAATCTCGCAGAAGAGAAGTTTAAT
CTGGATGATGTGCCCGACCTGAGCGGTAAGGTAGCGGTGGTTACCGGAGG
TAGTGAAG
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_004511KJC3_004511Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_004511-T1KJC3_004511-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_004511-T1.cdsKJC3_004511-T1.cdsAspergillus niger KJC3CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_004511-T1.exon2KJC3_004511-T1.exon2Aspergillus niger KJC3exon
KJC3_004511-T1.exon1KJC3_004511-T1.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_004511-T1.utr5p1KJC3_004511-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR036291
DBxrefInterPro:IPR002347
DBxrefPFAM:PF01370
DBxrefPFAM:PF13561
DBxrefPFAM:PF00106
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch3supercontigch3:5482862..5484080 -
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