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KJC3_004534-T1, KJC3_004534-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_004534-T1
Unique NameKJC3_004534-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch4:35998..37425+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_004534-T1 ID=KJC3_004534-T1|Name=KJC3_004534-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1428bp|location=Sequence derived from alignment at ch4:35998..37425+ (Aspergillus niger KJC3)
ATGGCTCGTATCGATTTGTCCGAGTTGACTATCGCCAAAGTGCACACGGC
ATTCCGCCGCGGAGACTACAGTGCCGTGGATCTGGTCCAAGCTTATTTGA
GACGCATCGACCAGGTGAACCCGCGGCTCAATGCCATCCTGGCCATCAAC
CCGAATGCGGTCCAAGAAGCTCAAGCCCTGGACGATGCCTTCCGAGCTTC
CCGCACATTACGCCCACTCCATGGGGTGCCAGTGCTGGTGAAGGACAATA
TCTTCACCACCGCGATGCCGACTACTTATGGTTCCAAGGTCGCCGCGTCG
CGCCCAGTATTACCCCTCGACGATGCCCAGGTGATCAAACAGCTGCAAGG
CGCCGGGGCCATCATTCTGGCGAAGACCACTCTGCCGGATTGGGCGACCG
ACTTCTTCAGCGCCTCGACTGTCTCGACGTGGACCCAGAACCCCTATGAC
TTGGCTCGAGACCCGGGCGGTTCCAGCAGCGGCACCGCCGCGGGGATCGC
AGCCAACCTGGCTTTGGTCGGCGTGGGTACGGACACGGGGGGCTCCATCC
GGCTGCCCTCCTCGTTCTGTAGCTTGGTCGGCATGCGGCCCACCGTCGGC
CTGACCAGCCTGGATGGCGTGTCCCCCTTTGTGGGCTGCCAAGATACCGT
AGGACCGATGTGTCGCACCGTCACCGACGCCGCGCGCTTACTCGACACGC
TCGTCCTGCCCACCAGCCCGCAATCCCTGGCTCCCAGCGGAGGCTCCTAC
GCGGCGCATCTCCTGCCAGACAGCCTCCCGGGTCCCGTTTGTCTGGGCCA
TCTGCCACAGCTGGGTGCGGAGGAGGCGGCCGTGGAGGCACTCTTCACTC
AGGTCCTCACCCGTCTGCGCGGACATGCTTCGGTCACCGTCCGGGACCTC
GATATTCCGAGTCTCTCCTCCACGCTCGCAGCAGCCTCTATCATGCTCAG
CCGTGGCCAACATGATCTCGACGACTTCTTGCGGACCACGGTGGGGACCA
GTCTGAAGACGATCTATCGGGATCACGCCTACCCGCCCACCAACTTCGGA
ATACCGGGGGTAGCAACGCATGCTTCGACCCTGACGGACCGCTCCACGGC
CTCCAACGCCCGCGATGCCCTCGACCGCATAATAACAGCCCATCTGGGCC
AGGCGGGGGTCGAAGTACTCGTGTTTTTGACCGCAGGACGGGCAGCTCCG
CGCCAGGAGGATATCACCCCGGAGATGGGAGTGACCTTCCCCGTGCATGC
CATGCTGGCCAGCACGCTGCAGTGGCCAGCCATCTCAGTGCCAATCGGGT
TTACAGCGACCGGCCTGCCCGTGGGACTGGAGATCCTCGGCAGGCCGCTC
AGCGACCAACGCTTGTTAGAAGTGGCCTTTGTTATCGAGCAGATTGTTCA
GGGACGCCGCCCCCCCACCGTAGATTGA
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Coding sequence (CDS) from alignment at ch4:35998..37425+

>KJC3_004534-T1 ID=KJC3_004534-T1|Name=KJC3_004534-T1|organism=Aspergillus niger KJC3|type=CDS|length=1428bp|location=Sequence derived from alignment at ch4:35998..37425+ (Aspergillus niger KJC3)
ATGGCTCGTATCGATTTGTCCGAGTTGACTATCGCCAAAGTGCACACGGC
ATTCCGCCGCGGAGACTACAGTGCCGTGGATCTGGTCCAAGCTTATTTGA
GACGCATCGACCAGGTGAACCCGCGGCTCAATGCCATCCTGGCCATCAAC
CCGAATGCGGTCCAAGAAGCTCAAGCCCTGGACGATGCCTTCCGAGCTTC
CCGCACATTACGCCCACTCCATGGGGTGCCAGTGCTGGTGAAGGACAATA
TCTTCACCACCGCGATGCCGACTACTTATGGTTCCAAGGTCGCCGCGTCG
CGCCCAGTATTACCCCTCGACGATGCCCAGGTGATCAAACAGCTGCAAGG
CGCCGGGGCCATCATTCTGGCGAAGACCACTCTGCCGGATTGGGCGACCG
ACTTCTTCAGCGCCTCGACTGTCTCGACGTGGACCCAGAACCCCTATGAC
TTGGCTCGAGACCCGGGCGGTTCCAGCAGCGGCACCGCCGCGGGGATCGC
AGCCAACCTGGCTTTGGTCGGCGTGGGTACGGACACGGGGGGCTCCATCC
GGCTGCCCTCCTCGTTCTGTAGCTTGGTCGGCATGCGGCCCACCGTCGGC
CTGACCAGCCTGGATGGCGTGTCCCCCTTTGTGGGCTGCCAAGATACCGT
AGGACCGATGTGTCGCACCGTCACCGACGCCGCGCGCTTACTCGACACGC
TCGTCCTGCCCACCAGCCCGCAATCCCTGGCTCCCAGCGGAGGCTCCTAC
GCGGCGCATCTCCTGCCAGACAGCCTCCCGGGTCCCGTTTGTCTGGGCCA
TCTGCCACAGCTGGGTGCGGAGGAGGCGGCCGTGGAGGCACTCTTCACTC
AGGTCCTCACCCGTCTGCGCGGACATGCTTCGGTCACCGTCCGGGACCTC
GATATTCCGAGTCTCTCCTCCACGCTCGCAGCAGCCTCTATCATGCTCAG
CCGTGGCCAACATGATCTCGACGACTTCTTGCGGACCACGGTGGGGACCA
GTCTGAAGACGATCTATCGGGATCACGCCTACCCGCCCACCAACTTCGGA
ATACCGGGGGTAGCAACGCATGCTTCGACCCTGACGGACCGCTCCACGGC
CTCCAACGCCCGCGATGCCCTCGACCGCATAATAACAGCCCATCTGGGCC
AGGCGGGGGTCGAAGTACTCGTGTTTTTGACCGCAGGACGGGCAGCTCCG
CGCCAGGAGGATATCACCCCGGAGATGGGAGTGACCTTCCCCGTGCATGC
CATGCTGGCCAGCACGCTGCAGTGGCCAGCCATCTCAGTGCCAATCGGGT
TTACAGCGACCGGCCTGCCCGTGGGACTGGAGATCCTCGGCAGGCCGCTC
AGCGACCAACGCTTGTTAGAAGTGGCCTTTGTTATCGAGCAGATTGTTCA
GGGACGCCGCCCCCCCACCGTAGATTGA
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_004534KJC3_004534Aspergillus niger KJC3gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_004534-T1.exon1KJC3_004534-T1.exon1Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_004534-T1.cdsKJC3_004534-T1.cdsAspergillus niger KJC3CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_004534-T1KJC3_004534-T1-proteinAspergillus niger KJC3polypeptide


Properties
Property NameValue
NoteantiSMASH:Cluster_4.1
NoteantiSMASH:Cluster_4.2
NoteSMCOG1105:amidase
DBxrefInterPro:IPR020556
DBxrefInterPro:IPR023631
DBxrefInterPro:IPR036928
DBxrefPFAM:PF01425
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch4supercontigch4:35998..37425 +
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