You are here

Home

KJC3_004535-T1, KJC3_004535-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_004535-T1
Unique NameKJC3_004535-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch4:37557..38876-

Legend: CDSpolypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_004535-T1 ID=KJC3_004535-T1|Name=KJC3_004535-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1320bp|location=Sequence derived from alignment at ch4:37557..38876- (Aspergillus niger KJC3)
ATGATGATGATGATGCGCCGCTCCATCTTGGCCATGGGGTATAATCTCCG
ACCCTGTCCACGCAGCGGTCGGATGGTCCTTGGAAGGTCCACGCATCCTC
GACCGCAATCCTCTGCCGCGGCTTCTCGCCCACCGCGCCCACCACACCCG
CAACCAACGTTAGCGAACTGGAAGATGGCCCCCGTCAGCAGAACCAGTTT
CCGCACCGTCGAACAGTTTATTCCGACAGCGTCCATCCCCACGGACGAGG
AGGTCTCGTGGGACCTGCCCCGCCAGGAGACTTCGTTCGAGGCATTTTCC
GTCCCCCAGGACCCCCAGAACCCGGAGGGCCCTCAGTACAACTGGAAGGA
ATTCCTCCAGCACACTGACACGGACAGCATCCTGGTGCTGCACCGCAGCC
AAGTCCGCTTCGAGGGCTACTACCAGGGCCACTCGGCCGCCGACCAGCAT
ATCTACATGTCGGCCTCCAAATCGATGACGGGACTGTTGGTCGGCATCCT
CGCCCAACAGGGTAAACTAGATCCGAAGCTTCCTGTCGAGCACTATCTGC
CGCAGCTGGCCGCCACCAGTGCCTATCGGGGCTGCTCGCTCCAGGACTTG
ATCGACATGCGTGCGGGAGTTTACTATACCGACGACGAAGCGCGTCTTTA
TGAAGTTGCCATCCACTGGGCCGAGCCCAAGGCTACGGATCCGCCTATCA
CCATGCGCGACTACTTTGCCACCTACCTCCAGGCGCCCGCCAAGGCCCCT
CACGGGGGTACCTTCTGGTACTTTTCGCCCAATACCGACCTACTCGGCCT
CGTGCTGGAGGCTGCCACCGGGGAGGCGTTCCCCAGCCTCCTGAGCCGAT
ACCTTTGGCAGCCGCTGGGCAGCGCCAGTGATGCTCAAGTTACTGTGGAC
CGCGGGGGCAAGTCCCGCGCCTCTGGGGGGCTGTGCTCATCCCTACAAGA
TCTAGCCCGCGTGGGACAGCTACTCCTACAGAACGGACGATGGGATTCGC
GACAGGTTGTGCCCCTGGAGGTGCTCGAAGACACCTGGAACAACGGAGAC
CGCCAGGCCTGGAATGATGGCGCCTTCGCGCCGCTCTTCGCTCCGGTGTA
CCAGAATATGTCCTACCGCAATGGCTGGTACGTGGTGCACGACGCGCCGC
GCATGATTTTCGCCATGGGCATTCACGGTCAGAATCTCTTCGTGGATCCG
GACAATGAGCTGGTGATTGCCAAGTTCTCTTCACACAATGACGAGAACGA
TGTCGAGCGCGTGCTGACGACGCACCGCGGGGTAGCGGAAATCCGGCGGC
TGCTAACGGAGACCGACTAG
back to top

Coding sequence (CDS) from alignment at ch4:37557..38876-

>KJC3_004535-T1 ID=KJC3_004535-T1|Name=KJC3_004535-T1|organism=Aspergillus niger KJC3|type=CDS|length=1320bp|location=Sequence derived from alignment at ch4:37557..38876- (Aspergillus niger KJC3)
ATGATGATGATGATGCGCCGCTCCATCTTGGCCATGGGGTATAATCTCCG
ACCCTGTCCACGCAGCGGTCGGATGGTCCTTGGAAGGTCCACGCATCCTC
GACCGCAATCCTCTGCCGCGGCTTCTCGCCCACCGCGCCCACCACACCCG
CAACCAACGTTAGCGAACTGGAAGATGGCCCCCGTCAGCAGAACCAGTTT
CCGCACCGTCGAACAGTTTATTCCGACAGCGTCCATCCCCACGGACGAGG
AGGTCTCGTGGGACCTGCCCCGCCAGGAGACTTCGTTCGAGGCATTTTCC
GTCCCCCAGGACCCCCAGAACCCGGAGGGCCCTCAGTACAACTGGAAGGA
ATTCCTCCAGCACACTGACACGGACAGCATCCTGGTGCTGCACCGCAGCC
AAGTCCGCTTCGAGGGCTACTACCAGGGCCACTCGGCCGCCGACCAGCAT
ATCTACATGTCGGCCTCCAAATCGATGACGGGACTGTTGGTCGGCATCCT
CGCCCAACAGGGTAAACTAGATCCGAAGCTTCCTGTCGAGCACTATCTGC
CGCAGCTGGCCGCCACCAGTGCCTATCGGGGCTGCTCGCTCCAGGACTTG
ATCGACATGCGTGCGGGAGTTTACTATACCGACGACGAAGCGCGTCTTTA
TGAAGTTGCCATCCACTGGGCCGAGCCCAAGGCTACGGATCCGCCTATCA
CCATGCGCGACTACTTTGCCACCTACCTCCAGGCGCCCGCCAAGGCCCCT
CACGGGGGTACCTTCTGGTACTTTTCGCCCAATACCGACCTACTCGGCCT
CGTGCTGGAGGCTGCCACCGGGGAGGCGTTCCCCAGCCTCCTGAGCCGAT
ACCTTTGGCAGCCGCTGGGCAGCGCCAGTGATGCTCAAGTTACTGTGGAC
CGCGGGGGCAAGTCCCGCGCCTCTGGGGGGCTGTGCTCATCCCTACAAGA
TCTAGCCCGCGTGGGACAGCTACTCCTACAGAACGGACGATGGGATTCGC
GACAGGTTGTGCCCCTGGAGGTGCTCGAAGACACCTGGAACAACGGAGAC
CGCCAGGCCTGGAATGATGGCGCCTTCGCGCCGCTCTTCGCTCCGGTGTA
CCAGAATATGTCCTACCGCAATGGCTGGTACGTGGTGCACGACGCGCCGC
GCATGATTTTCGCCATGGGCATTCACGGTCAGAATCTCTTCGTGGATCCG
GACAATGAGCTGGTGATTGCCAAGTTCTCTTCACACAATGACGAGAACGA
TGTCGAGCGCGTGCTGACGACGCACCGCGGGGTAGCGGAAATCCGGCGGC
TGCTAACGGAGACCGACTAG
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_004535KJC3_004535Aspergillus niger KJC3gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_004535-T1.cdsKJC3_004535-T1.cdsAspergillus niger KJC3CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_004535-T1.exon1KJC3_004535-T1.exon1Aspergillus niger KJC3exon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_004535-T1KJC3_004535-T1-proteinAspergillus niger KJC3polypeptide


Properties
Property NameValue
NoteantiSMASH:Cluster_4.1
NoteMEROPS:MER0028284
NoteSMCOG1053:beta-lactamase
DBxrefInterPro:IPR001466
DBxrefInterPro:IPR012338
DBxrefPFAM:PF00144
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch4supercontigch4:37557..38876 -
Powered by Drupal