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KJC3_004537-T2, KJC3_004537-T2 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_004537-T2
Unique NameKJC3_004537-T2
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch4:43524..46021-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_004537-T2 ID=KJC3_004537-T2|Name=KJC3_004537-T2|organism=Aspergillus niger KJC3|type=mRNA|length=2498bp|location=Sequence derived from alignment at ch4:43524..46021- (Aspergillus niger KJC3)
CTGCTGCGTGTTGGCGGGGAGGGTGTCACTGGCATTGAGCTTAGCAGTTT
TGAGCACTTAAGCTGGGCTGAAGCCTTGTCTAGGCACCACCTTTTCGCCA
GCCATAATATATTGTTCACTATACAGATACGCCTGTATCTGTCCGTGTTA
ATTCCCTTCTACATCGTTCTACCACCTGCTTGGGTAATCATTATGGGTGC
TGAGGTACCCACGGCTACCAGCGAAGATGTGTCTCCATCCTTTGAAATTC
CGCGCCCAACAATTGCAACATGGAGGCTGGTGATTATTCTTCTCTGGTGA
GACCGCAAGAGAGGCTTCGCCGGCGCCATGAGTGACGGAGCACTGACCAT
GAATTCCCGAAGCATCGCCATCGGACTGTTCTTGTCTTTGATGGATACCA
CCATTATTTCGACCATGCTATACACCATTTCTGACGAATTCGATGGATTC
AAAACCTGCTCGTGGATCGTCCTGGCGTACACCCTGTCCTATGTTGGTGA
ATATCCACTTCTTGCTTTGCTCTTCTCGAGACATCTTCACTCAACACAAA
CGCAGGATGCGCCGTATTCATGGCAAGATTATCCGATGTTATTGGCCGAA
AATTCCTCCTGTGCATGTGCTTCGTGATCTTCCTCGGCGCGTCGATGGGA
TGCGCCGCGTCGAAGAATATGGGCCAGCTCATCGGCTTCCGTGCGATGCA
GGGAATCGGCGGATCGGGGCTGTACGCGATGGCCATGATTATATATCCCG
AGATCAGCCCCCCTCCTTTACTCCCTGCAATATCTGGCATCATCGGCGTG
GTTGTCGCCCTTGCTGGGATTAGCGGGCCGTTGATCGGGGGCGCCCTGAC
GAGTTACCGTACCTGGCGCTGGGGATTCTGGATAAAGTGCGTCCTTGCAA
CAGCTCAAAAGATGCGAATAAAGAAAACTGTCTAATCACTTTGTCTAGCG
GCCCATGTGCGTTTCTTCCTCTGGTCACCCTGCTGCTCGTGTGGCCCAAC
GATTTCCATTTCGCGAAGAATGTTCGTTTCCGGCACCTTGACTATCTCGG
CGCACTTCTCATACTTGTCGGATCTGTCCTCTTCGTCTTCATCTTGAATG
AAGCAGCGATCAGAGCCTATGCGTGGAACAGCGCCCCCGTGATTATCGTC
CTCATCATCTCCGCACTGTCATGGGGAGCGCTCGTCTACTGGCAGTGGGT
TATCTTGTCCAAACCGAGATTCAAGCATATTCGGCCTCAATTGCCGTTCC
GGCTACTGTCAAGCCGTGTCATGGTCGCTGGCTTCGTGTGAGTTTCTTTG
GAAGCGATCCCCGGAGAATATTATATAGCACCCCACTGACGGGCCCGCAA
CAGGAGCACCATCCTAACGGGATTTGTCATGCTTCTGGTCATCGTCAACA
TCCCCCTGCGTGCGCAGATTGTCAACTTGAAGGACGCGGTCGCATCTGGC
ATTCTGCTCCTCCCGTTGATGGCAGGCACAGCCGTCGGCTCTGCAATCGG
CGGGGCCGCGTCTGCGAAGCGAAATAATGCCTTCTGGACGCTGAACCTGG
CAAGCATTTTCATGGTGATAGGGAGTGCCTCGCTCTCGACTCTGACGGAC
TCAATAGATCCTGCACCGGGGCAGTGGGGACTCGAAGCGATTCTGGGGTT
TGGGATCGGGTTGAGTCTCTCTACAATTACGTTTCTTACCACGATGCAGG
TCGAGTTTCAGGATCATGGTACGTGCGTTCCTTGTTCTTTTCTTCCAATG
CGTATATCTGGCTGGGGTAATCCAAACAGACATCCCTTGATACTCGTCTA
AATATCAAGGAAAAAAAACTAACCTCCACCCCCTTTATAGCCGTCGCTCA
AGGCATCGTCGCCCAACTGCGCATTTTCGGCGGAAGCATCGGCATCGCCT
CGGGCTTCATCGTCTTCAACACAAACGTCCAGCACACGCTCGCCGGCGTC
CTCACACCCGAGCAACTGAATGAATTCTACCGGACCCCCGCCGCGATCTA
CCGGCTCCCCGTGCGCCAACAGCTTGTCGTTCGCCAGGTTTACGTTAGTA
CGTTCAACACCGACATGCGCATCTGTGCGGGTATCGCGGCGGCGTGCCTC
GTTGCGACGCTGTGCACGTATCAGCGGAAGCCGCAGTCGATCAAGCAGCG
GCTTGCGGATTTAGAGGCGGCGTATGCAAGGACTGAGGCGGCTAGGGATG
AGGGGGCTGCGTGAAGGATGAAGGTTGAATGGCGACGAGGGAGCGTGTCC
TGCTGTGGGTGCTAGAGGGGTGGATGGAACAAGGGGCCTGTAAAGGCTTC
CACTTGCACCGGGTGGGCAATTGAAAAGCTTGGTTTTGTCTTTGTCTTCT
TTTGTTTCTCGTTTGTAGCATGTCACCACTATGAGAATTTTGGAATGTTA
TGCTTTTCTTTCGAGAACTGCCCCTGTCTGCACTTTATTCACTTCGTGAC
CGCAATGACTATACGGTGCAAGCATGTATGAATCACGTTGATTGGCCA
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Coding sequence (CDS) from alignment at ch4:43524..46021-

>KJC3_004537-T2 ID=KJC3_004537-T2|Name=KJC3_004537-T2|organism=Aspergillus niger KJC3|type=CDS|length=5580bp|location=Sequence derived from alignment at ch4:43524..46021- (Aspergillus niger KJC3)
CCGTCGCTCAAGGCATCGTCGCCCAACTGCGCATTTTCGGCGGAAGCATC
GGCATCGCCTCGGGCTTCATCGTCTTCAACACAAACGTCCAGCACACGCT
CGCCGGCGTCCTCACACCCGAGCAACTGAATGAATTCTACCGGACCCCCG
CCGCGATCTACCGGCTCCCCGTGCGCCAACAGCTTGTCGTTCGCCAGGTT
TACGTTAGTACGTTCAACACCGACATGCGCATCTGTGCGGGTATCGCGGC
GGCGTGCCTCGTTGCGACGCTGTGCACGTATCAGCGGAAGCCGCAGTCGA
TCAAGCAGCGGCTTGCGGATTTAGAGGCGGCGTATGCAAGGACTGAGGCG
GCTAGGGATGAGGGGGCTGCGTGAGAGCACCATCCTAACGGGATTTGTCA
TGCTTCTGGTCATCGTCAACATCCCCCTGCGTGCGCAGATTGTCAACTTG
AAGGACGCGGTCGCATCTGGCATTCTGCTCCTCCCGTTGATGGCAGGCAC
AGCCGTCGGCTCTGCAATCGGCGGGGCCGCGTCTGCGAAGCGAAATAATG
CCTTCTGGACGCTGAACCTGGCAAGCATTTTCATGGTGATAGGGAGTGCC
TCGCTCTCGACTCTGACGGACTCAATAGATCCTGCACCGGGGCAGTGGGG
ACTCGAAGCGATTCTGGGGTTTGGGATCGGGTTGAGTCTCTCTACAATTA
CGTTTCTTACCACGATGCAGGTCGAGTTTCAGGATCATGCGGCCCATGTG
CGTTTCTTCCTCTGGTCACCCTGCTGCTCGTGTGGCCCAACGATTTCCAT
TTCGCGAAGAATGTTCGTTTCCGGCACCTTGACTATCTCGGCGCACTTCT
CATACTTGTCGGATCTGTCCTCTTCGTCTTCATCTTGAATGAAGCAGCGA
TCAGAGCCTATGCGTGGAACAGCGCCCCCGTGATTATCGTCCTCATCATC
TCCGCACTGTCATGGGGAGCGCTCGTCTACTGGCAGTGGGTTATCTTGTC
CAAACCGAGATTCAAGCATATTCGGCCTCAATTGCCGTTCCGGCTACTGT
CAAGCCGTGTCATGGTCGCTGGCTTCGTATGGCAAGATTATCCGATGTTA
TTGGCCGAAAATTCCTCCTGTGCATGTGCTTCGTGATCTTCCTCGGCGCG
TCGATGGGATGCGCCGCGTCGAAGAATATGGGCCAGCTCATCGGCTTCCG
TGCGATGCAGGGAATCGGCGGATCGGGGCTGTACGCGATGGCCATGATTA
TATATCCCGAGATCAGCCCCCCTCCTTTACTCCCTGCAATATCTGGCATC
ATCGGCGTGGTTGTCGCCCTTGCTGGGATTAGCGGGCCGTTGATCGGGGG
CGCCCTGACGAGTTACCGTACCTGGCGCTGGGGATTCTGGATAAACCGTC
GCTCAAGGCATCGTCGCCCAACTGCGCATTTTCGGCGGAAGCATCGGCAT
CGCCTCGGGCTTCATCGTCTTCAACACAAACGTCCAGCACACGCTCGCCG
GCGTCCTCACACCCGAGCAACTGAATGAATTCTACCGGACCCCCGCCGCG
ATCTACCGGCTCCCCGTGCGCCAACAGCTTGTCGTTCGCCAGGTTTACGT
TAGTACGTTCAACACCGACATGCGCATCTGTGCGGGTATCGCGGCGGCGT
GCCTCGTTGCGACGCTGTGCACGTATCAGCGGAAGCCGCAGTCGATCAAG
CAGCGGCTTGCGGATTTAGAGGCGGCGTATGCAAGGACTGAGGCGGCTAG
GGATGAGGGGGCTGCGTGAGAGCACCATCCTAACGGGATTTGTCATGCTT
CTGGTCATCGTCAACATCCCCCTGCGTGCGCAGATTGTCAACTTGAAGGA
CGCGGTCGCATCTGGCATTCTGCTCCTCCCGTTGATGGCAGGCACAGCCG
TCGGCTCTGCAATCGGCGGGGCCGCGTCTGCGAAGCGAAATAATGCCTTC
TGGACGCTGAACCTGGCAAGCATTTTCATGGTGATAGGGAGTGCCTCGCT
CTCGACTCTGACGGACTCAATAGATCCTGCACCGGGGCAGTGGGGACTCG
AAGCGATTCTGGGGTTTGGGATCGGGTTGAGTCTCTCTACAATTACGTTT
CTTACCACGATGCAGGTCGAGTTTCAGGATCATGCGGCCCATGTGCGTTT
CTTCCTCTGGTCACCCTGCTGCTCGTGTGGCCCAACGATTTCCATTTCGC
GAAGAATGTTCGTTTCCGGCACCTTGACTATCTCGGCGCACTTCTCATAC
TTGTCGGATCTGTCCTCTTCGTCTTCATCTTGAATGAAGCAGCGATCAGA
GCCTATGCGTGGAACAGCGCCCCCGTGATTATCGTCCTCATCATCTCCGC
ACTGTCATGGGGAGCGCTCGTCTACTGGCAGTGGGTTATCTTGTCCAAAC
CGAGATTCAAGCATATTCGGCCTCAATTGCCGTTCCGGCTACTGTCAAGC
CGTGTCATGGTCGCTGGCTTCGTATGGCAAGATTATCCGATGTTATTGGC
CGAAAATTCCTCCTGTGCATGTGCTTCGTGATCTTCCTCGGCGCGTCGAT
GGGATGCGCCGCGTCGAAGAATATGGGCCAGCTCATCGGCTTCCGTGCGA
TGCAGGGAATCGGCGGATCGGGGCTGTACGCGATGGCCATGATTATATAT
CCCGAGATCAGCCCCCCTCCTTTACTCCCTGCAATATCTGGCATCATCGG
CGTGGTTGTCGCCCTTGCTGGGATTAGCGGGCCGTTGATCGGGGGCGCCC
TGACGAGTTACCGTACCTGGCGCTGGGGATTCTGGATAAACCGTCGCTCA
AGGCATCGTCGCCCAACTGCGCATTTTCGGCGGAAGCATCGGCATCGCCT
CGGGCTTCATCGTCTTCAACACAAACGTCCAGCACACGCTCGCCGGCGTC
CTCACACCCGAGCAACTGAATGAATTCTACCGGACCCCCGCCGCGATCTA
CCGGCTCCCCGTGCGCCAACAGCTTGTCGTTCGCCAGGTTTACGTTAGTA
CGTTCAACACCGACATGCGCATCTGTGCGGGTATCGCGGCGGCGTGCCTC
GTTGCGACGCTGTGCACGTATCAGCGGAAGCCGCAGTCGATCAAGCAGCG
GCTTGCGGATTTAGAGGCGGCGTATGCAAGGACTGAGGCGGCTAGGGATG
AGGGGGCTGCGTGAGAGCACCATCCTAACGGGATTTGTCATGCTTCTGGT
CATCGTCAACATCCCCCTGCGTGCGCAGATTGTCAACTTGAAGGACGCGG
TCGCATCTGGCATTCTGCTCCTCCCGTTGATGGCAGGCACAGCCGTCGGC
TCTGCAATCGGCGGGGCCGCGTCTGCGAAGCGAAATAATGCCTTCTGGAC
GCTGAACCTGGCAAGCATTTTCATGGTGATAGGGAGTGCCTCGCTCTCGA
CTCTGACGGACTCAATAGATCCTGCACCGGGGCAGTGGGGACTCGAAGCG
ATTCTGGGGTTTGGGATCGGGTTGAGTCTCTCTACAATTACGTTTCTTAC
CACGATGCAGGTCGAGTTTCAGGATCATGCGGCCCATGTGCGTTTCTTCC
TCTGGTCACCCTGCTGCTCGTGTGGCCCAACGATTTCCATTTCGCGAAGA
ATGTTCGTTTCCGGCACCTTGACTATCTCGGCGCACTTCTCATACTTGTC
GGATCTGTCCTCTTCGTCTTCATCTTGAATGAAGCAGCGATCAGAGCCTA
TGCGTGGAACAGCGCCCCCGTGATTATCGTCCTCATCATCTCCGCACTGT
CATGGGGAGCGCTCGTCTACTGGCAGTGGGTTATCTTGTCCAAACCGAGA
TTCAAGCATATTCGGCCTCAATTGCCGTTCCGGCTACTGTCAAGCCGTGT
CATGGTCGCTGGCTTCGTATGGCAAGATTATCCGATGTTATTGGCCGAAA
ATTCCTCCTGTGCATGTGCTTCGTGATCTTCCTCGGCGCGTCGATGGGAT
GCGCCGCGTCGAAGAATATGGGCCAGCTCATCGGCTTCCGTGCGATGCAG
GGAATCGGCGGATCGGGGCTGTACGCGATGGCCATGATTATATATCCCGA
GATCAGCCCCCCTCCTTTACTCCCTGCAATATCTGGCATCATCGGCGTGG
TTGTCGCCCTTGCTGGGATTAGCGGGCCGTTGATCGGGGGCGCCCTGACG
AGTTACCGTACCTGGCGCTGGGGATTCTGGATAAACCGTCGCTCAAGGCA
TCGTCGCCCAACTGCGCATTTTCGGCGGAAGCATCGGCATCGCCTCGGGC
TTCATCGTCTTCAACACAAACGTCCAGCACACGCTCGCCGGCGTCCTCAC
ACCCGAGCAACTGAATGAATTCTACCGGACCCCCGCCGCGATCTACCGGC
TCCCCGTGCGCCAACAGCTTGTCGTTCGCCAGGTTTACGTTAGTACGTTC
AACACCGACATGCGCATCTGTGCGGGTATCGCGGCGGCGTGCCTCGTTGC
GACGCTGTGCACGTATCAGCGGAAGCCGCAGTCGATCAAGCAGCGGCTTG
CGGATTTAGAGGCGGCGTATGCAAGGACTGAGGCGGCTAGGGATGAGGGG
GCTGCGTGAGAGCACCATCCTAACGGGATTTGTCATGCTTCTGGTCATCG
TCAACATCCCCCTGCGTGCGCAGATTGTCAACTTGAAGGACGCGGTCGCA
TCTGGCATTCTGCTCCTCCCGTTGATGGCAGGCACAGCCGTCGGCTCTGC
AATCGGCGGGGCCGCGTCTGCGAAGCGAAATAATGCCTTCTGGACGCTGA
ACCTGGCAAGCATTTTCATGGTGATAGGGAGTGCCTCGCTCTCGACTCTG
ACGGACTCAATAGATCCTGCACCGGGGCAGTGGGGACTCGAAGCGATTCT
GGGGTTTGGGATCGGGTTGAGTCTCTCTACAATTACGTTTCTTACCACGA
TGCAGGTCGAGTTTCAGGATCATGCGGCCCATGTGCGTTTCTTCCTCTGG
TCACCCTGCTGCTCGTGTGGCCCAACGATTTCCATTTCGCGAAGAATGTT
CGTTTCCGGCACCTTGACTATCTCGGCGCACTTCTCATACTTGTCGGATC
TGTCCTCTTCGTCTTCATCTTGAATGAAGCAGCGATCAGAGCCTATGCGT
GGAACAGCGCCCCCGTGATTATCGTCCTCATCATCTCCGCACTGTCATGG
GGAGCGCTCGTCTACTGGCAGTGGGTTATCTTGTCCAAACCGAGATTCAA
GCATATTCGGCCTCAATTGCCGTTCCGGCTACTGTCAAGCCGTGTCATGG
TCGCTGGCTTCGTATGGCAAGATTATCCGATGTTATTGGCCGAAAATTCC
TCCTGTGCATGTGCTTCGTGATCTTCCTCGGCGCGTCGATGGGATGCGCC
GCGTCGAAGAATATGGGCCAGCTCATCGGCTTCCGTGCGATGCAGGGAAT
CGGCGGATCGGGGCTGTACGCGATGGCCATGATTATATATCCCGAGATCA
GCCCCCCTCCTTTACTCCCTGCAATATCTGGCATCATCGGCGTGGTTGTC
GCCCTTGCTGGGATTAGCGGGCCGTTGATCGGGGGCGCCCTGACGAGTTA
CCGTACCTGGCGCTGGGGATTCTGGATAAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0055085transmembrane transport
Vocabulary: Molecular Function
TermDefinition
GO:0022857transmembrane transporter activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_004537KJC3_004537Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_004537-T2KJC3_004537-T2-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_004537-T2.cdsKJC3_004537-T2.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_004537-T2.utr3p1KJC3_004537-T2.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_004537-T2.exon5KJC3_004537-T2.exon5Aspergillus niger KJC3exon
KJC3_004537-T2.exon4KJC3_004537-T2.exon4Aspergillus niger KJC3exon
KJC3_004537-T2.exon3KJC3_004537-T2.exon3Aspergillus niger KJC3exon
KJC3_004537-T2.exon2KJC3_004537-T2.exon2Aspergillus niger KJC3exon
KJC3_004537-T2.exon1KJC3_004537-T2.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_004537-T2.utr5p2KJC3_004537-T2.utr5p2Aspergillus niger KJC3five_prime_UTR
KJC3_004537-T2.utr5p1KJC3_004537-T2.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR036259
DBxrefInterPro:IPR020846
DBxrefInterPro:IPR011701
DBxrefPFAM:PF07690
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch4supercontigch4:43524..46021 -
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