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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch4:69810..71022+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_004546-T1 ID=KJC3_004546-T1|Name=KJC3_004546-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1213bp|location=Sequence derived from alignment at ch4:69810..71022+ (Aspergillus niger KJC3)
ATGGCTGACCAAGCAGGACAGCCCATCGACATTCATGCCCTTGAGAAATT
CCTTACTCAGGCATTGCCTCAGATCCGACCTCCTTTCCACGTGCAACAAG
TTGAGCTATCCTAGTCTCATTTCTACAGTGCATGGAAGCTGATTACCATT
ACGTGACAGTTTCAAGTGGGACAATCCAATCCAACCTATAAAATTACGGA
CTCCGGTGGAATAGCGTATGTCCTGCGAAAGAAACCGCCTGGAAAGCTCC
TCTCCAGGACGGTCCATCAAATCGAGCGGGAATATAGAGCGCTCTCTGCA
TTCCAGGGAACTGAAGTCCCAGTCCCAAAGACCTACTGTTTGTACGAAAA
AGATGATGTTCTCGGAACCCCATTCTACGTTATGGAGTTTCTGGATGGTC
GGATCTTCACCGATTTCACAATGCCTGGGGTGAGTCCCACCGAGAGGATA
GCCTTGTAAGTTCCCTTCTGATATGCCTTCATTGGTCTTTATTCCTGTCT
GACTTGGGATCATCAGGTGGAGAGATGCTGTACGAGTGTTAGGCAAGATT
CATACCACCAATTACCATTCAGTCGGGCTACAGAGATTTGGTAAGCAAGG
AGGCTACTATGACCGTCAGCTGTCGACGTTTACATATCTATCCCGTGCAC
AAGGAAAGGTGGAAGATCCTTTGACCAAGGTCCCTGTTGGAGAGTTACCG
CATTACACTGAAATGGTCGACTTTTTCTGTCGTCATGAGCCTCGGCCCAA
GGATCGGCATACCATAGTGCATGGTGACTACAAGATCGATAACTTGATCT
TCTATCCCACTGAATCACGGGTAATTGGGGTCCTTGACTGGGAAATGGCG
ACTATGGGCCATCCCCTTTCGGATTTTTGCAACCTCACGCATCCTTATTT
CTGGGATGGCCTGAACCAGGACGTGGCAATGTTTCGTTCTGGGAAGGTTG
CAGGATTGCCTAGTCGCGCACAGTGCTTACAGTGGTATGTCGAGACTGCA
GGCTGGGACCCCGAACCAGATCTTTGGTGGGGAGATGCATTTTTTGCATT
CAGAACCACTGTTATCTTGCAGAGCGTAGCCGCCAGGCATGCCGAGCGGC
AGACAAGCAGTCCGGACTCGGTAAAATATGCCCTGAAAGTAAAGCCATCC
GCGGAGGCTGCCTGGGAACTAGTGAGGAAAGCAAAGCTTAAACCTAAGTC
TGGGAGATTGTGA back to topCoding sequence (CDS) from alignment at ch4:69810..71022+ >KJC3_004546-T1 ID=KJC3_004546-T1|Name=KJC3_004546-T1|organism=Aspergillus niger KJC3|type=CDS|length=3276bp|location=Sequence derived from alignment at ch4:69810..71022+ (Aspergillus niger KJC3)
ATGGCTGACCAAGCAGGACAGCCCATCGACATTCATGCCCTTGAGAAATT
CCTTACTCAGGCATTGCCTCAGATCCGACCTCCTTTCCACGTGCAACAAT
TTCAAGTGGGACAATCCAATCCAACCTATAAAATTACGGACTCCGGTGGA
ATAGCGTATGTCCTGCGAAAGAAACCGCCTGGAAAGCTCCTCTCCAGGAC
GGTCCATCAAATCGAGCGGGAATATAGAGCGCTCTCTGCATTCCAGGGAA
CTGAAGTCCCAGTCCCAAAGACCTACTGTTTGTACGAAAAAGATGATGTT
CTCGGAACCCCATTCTACGTTATGGAGTTTCTGGATGGTCGGATCTTCAC
CGATTTCACAATGCCTGGGGTGAGTCCCACCGAGAGGATAGCCTTGTGGA
GAGATGCTGTACGAGTGTTAGGCAAGATTCATACCACCAATTACCATTCA
GTCGGGCTACAGAGATTTGGTAAGCAAGGAGGCTACTATGACCGTCAGCT
GTCGACGTTTACATATCTATCCCGTGCACAAGGAAAGGTGGAAGATCCTT
TGACCAAGGTCCCTGTTGGAGAGTTACCGCATTACACTGAAATGGTCGAC
TTTTTCTGTCGTCATGAGCCTCGGCCCAAGGATCGGCATACCATAGTGCA
TGGTGACTACAAGATCGATAACTTGATCTTCTATCCCACTGAATCACGGG
TAATTGGGGTCCTTGACTGGGAAATGGCGACTATGGGCCATCCCCTTTCG
GATTTTTGCAACCTCACGCATCCTTATTTCTGGGATGGCCTGAACCAGGA
CGTGGCAATGTTTCGTTCTGGGAAGGTTGCAGGATTGCCTAGTCGCGCAC
AGTGCTTACAGTGGTATGTCGAGACTGCAGGCTGGGACCCCGAACCAGAT
CTTTGGTGGGGAGATGCATTTTTTGCATTCAGAACCACTGTTATCTTGCA
GAGCGTAGCCGCCAGGCATGCCGAGCGGCAGACAAGCAGTCCGGACTCGG
TAAAATATGCCCTGAAAGTAAAGCCATCCGCGGAGGCTGCCTGGGAACTA
GTGAGGAAAGCAAAGCTTAAACCTAAGTCTGGGAGATTGTGAATGGCTGA
CCAAGCAGGACAGCCCATCGACATTCATGCCCTTGAGAAATTCCTTACTC
AGGCATTGCCTCAGATCCGACCTCCTTTCCACGTGCAACAATTTCAAGTG
GGACAATCCAATCCAACCTATAAAATTACGGACTCCGGTGGAATAGCGTA
TGTCCTGCGAAAGAAACCGCCTGGAAAGCTCCTCTCCAGGACGGTCCATC
AAATCGAGCGGGAATATAGAGCGCTCTCTGCATTCCAGGGAACTGAAGTC
CCAGTCCCAAAGACCTACTGTTTGTACGAAAAAGATGATGTTCTCGGAAC
CCCATTCTACGTTATGGAGTTTCTGGATGGTCGGATCTTCACCGATTTCA
CAATGCCTGGGGTGAGTCCCACCGAGAGGATAGCCTTGTGGAGAGATGCT
GTACGAGTGTTAGGCAAGATTCATACCACCAATTACCATTCAGTCGGGCT
ACAGAGATTTGGTAAGCAAGGAGGCTACTATGACCGTCAGCTGTCGACGT
TTACATATCTATCCCGTGCACAAGGAAAGGTGGAAGATCCTTTGACCAAG
GTCCCTGTTGGAGAGTTACCGCATTACACTGAAATGGTCGACTTTTTCTG
TCGTCATGAGCCTCGGCCCAAGGATCGGCATACCATAGTGCATGGTGACT
ACAAGATCGATAACTTGATCTTCTATCCCACTGAATCACGGGTAATTGGG
GTCCTTGACTGGGAAATGGCGACTATGGGCCATCCCCTTTCGGATTTTTG
CAACCTCACGCATCCTTATTTCTGGGATGGCCTGAACCAGGACGTGGCAA
TGTTTCGTTCTGGGAAGGTTGCAGGATTGCCTAGTCGCGCACAGTGCTTA
CAGTGGTATGTCGAGACTGCAGGCTGGGACCCCGAACCAGATCTTTGGTG
GGGAGATGCATTTTTTGCATTCAGAACCACTGTTATCTTGCAGAGCGTAG
CCGCCAGGCATGCCGAGCGGCAGACAAGCAGTCCGGACTCGGTAAAATAT
GCCCTGAAAGTAAAGCCATCCGCGGAGGCTGCCTGGGAACTAGTGAGGAA
AGCAAAGCTTAAACCTAAGTCTGGGAGATTGTGAATGGCTGACCAAGCAG
GACAGCCCATCGACATTCATGCCCTTGAGAAATTCCTTACTCAGGCATTG
CCTCAGATCCGACCTCCTTTCCACGTGCAACAATTTCAAGTGGGACAATC
CAATCCAACCTATAAAATTACGGACTCCGGTGGAATAGCGTATGTCCTGC
GAAAGAAACCGCCTGGAAAGCTCCTCTCCAGGACGGTCCATCAAATCGAG
CGGGAATATAGAGCGCTCTCTGCATTCCAGGGAACTGAAGTCCCAGTCCC
AAAGACCTACTGTTTGTACGAAAAAGATGATGTTCTCGGAACCCCATTCT
ACGTTATGGAGTTTCTGGATGGTCGGATCTTCACCGATTTCACAATGCCT
GGGGTGAGTCCCACCGAGAGGATAGCCTTGTGGAGAGATGCTGTACGAGT
GTTAGGCAAGATTCATACCACCAATTACCATTCAGTCGGGCTACAGAGAT
TTGGTAAGCAAGGAGGCTACTATGACCGTCAGCTGTCGACGTTTACATAT
CTATCCCGTGCACAAGGAAAGGTGGAAGATCCTTTGACCAAGGTCCCTGT
TGGAGAGTTACCGCATTACACTGAAATGGTCGACTTTTTCTGTCGTCATG
AGCCTCGGCCCAAGGATCGGCATACCATAGTGCATGGTGACTACAAGATC
GATAACTTGATCTTCTATCCCACTGAATCACGGGTAATTGGGGTCCTTGA
CTGGGAAATGGCGACTATGGGCCATCCCCTTTCGGATTTTTGCAACCTCA
CGCATCCTTATTTCTGGGATGGCCTGAACCAGGACGTGGCAATGTTTCGT
TCTGGGAAGGTTGCAGGATTGCCTAGTCGCGCACAGTGCTTACAGTGGTA
TGTCGAGACTGCAGGCTGGGACCCCGAACCAGATCTTTGGTGGGGAGATG
CATTTTTTGCATTCAGAACCACTGTTATCTTGCAGAGCGTAGCCGCCAGG
CATGCCGAGCGGCAGACAAGCAGTCCGGACTCGGTAAAATATGCCCTGAA
AGTAAAGCCATCCGCGGAGGCTGCCTGGGAACTAGTGAGGAAAGCAAAGC
TTAAACCTAAGTCTGGGAGATTGTGA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR011009 |
| DBxref | InterPro:IPR041726 |
| DBxref | InterPro:IPR002575 |
| DBxref | PFAM:PF01636 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch4 | supercontig | ch4:69810..71022 + |
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