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KJC3_004558-T1, KJC3_004558-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_004558-T1
Unique NameKJC3_004558-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch4:97292..98732+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_004558-T1 ID=KJC3_004558-T1|Name=KJC3_004558-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1441bp|location=Sequence derived from alignment at ch4:97292..98732+ (Aspergillus niger KJC3)
GTCCGATGTAAAAGTCCCACGGTACATTTCTGCTATCCTGGCAAGATCAG
CTCCTGCTCGGGGATTGCGGACCTGTGCAATATTGCAAACCTTATGTCCC
GGATTTAACGAGTCAGGTCATTTAACTCCGACCAGTGGCACAAGCGCGGG
AGGTATGGCACACGGAGGAAACGGAGACAAGCATGGAGAGAGGCAAAGGA
TATGAAGATAAATATTTTGGAGGGACGGCAGGTTAAATACTGGGAGCTAT
ATATATTGTCGTGCTCTCATTTATCCGATTTCGTTTGCATTGAGCGAATA
GAGCTGTGTCCACAATACGCACGATGGCATCCTACCTAGTTACCGGCAGC
ACTCGTGGAATCGGCTTCGAATTGGTCCGCCAATTATCAGAAAAGTCCCC
CTCAGAAGTCAGTACCATCATTGCCACCTCCCGATCGGTCAATGCCTCCC
TGCAGGACCTAGCAGACCGGCATCCCGGCCGGGTCGTGCTTGTTCCCTTG
GATGTTACGGTCCCCGAGTCCATCCAGAAGGCCGCCCAGACCGTGGAGAG
CATCATGGGCGACAAGGGACTTGATGTGCTCATTAACAATGCCGGCATCG
TGGGTTGGGGCCAGATTAAGGACATGTTCGTTTCAATCCATGGATGACTT
AAAACTGCTGATGGAAGCTAACGTCCACCAGGGCGGACCTGGAAGACACT
TTCCGGGTCAACGTGACCGGTCCACATATCATCACCCAGAACTTTTTGCC
GGTATTGCGAAAGGGCTCTATGAAGAAGATCGTCAACATGTAATGCCTCT
TGACCCGAAACCGACCGTGTTGAAGCCTGACTCGCATCCTCCAGTTCCAG
CAGCGTCGGCTCCATTGCAAAGCAGTCCGTTTACCGGGAGCTGCCTGCCC
CCTCCTATAAAATCACCAAGGCCGCCTTGAATATGATGACGGTGCTATAC
TCCCAAGAGCTTGAGATCGAGGGGTTCACCGTATTCTGCGTGAGTCCGGG
GGTGAGTGCCAATTTAGACCTCAAGCCAATCCCGACATATTTCTGATCTC
AACGTTAGTGGTTGAAGACAGACGAAGCCAATGCTCATGCCGATCTTCCG
GTCGGAACTGGAGTCGAGCGCGTTTTGGAGATGATCCGTGATAGGGGGGT
GGAAGTCAATGGAAGATTTTTAAATATTCATGTTCCTGGGTGGGAGAATA
ACCCTGGTTTAAACCAGTATGATGGAAAGGAGCTGCCATGGTAGACGGGG
CAGATGGATGACGATCGGCGGTGGGAGATGTACTAATCCATGTATGGCTT
ACGATCAAAGACCGATGAGTTGAAGATGCAGTAACAGGAACTCTAAACTG
ACTCGGTGGGAGAGACTATGACGCGATGCGTACTATTTTGCTATTTTTGT
GCAACTCTCGGCCTACTGAACGAGAGGCAGGTTGCCTGAGC
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Coding sequence (CDS) from alignment at ch4:97292..98732+

>KJC3_004558-T1 ID=KJC3_004558-T1|Name=KJC3_004558-T1|organism=Aspergillus niger KJC3|type=CDS|length=3012bp|location=Sequence derived from alignment at ch4:97292..98732+ (Aspergillus niger KJC3)
ATGGCATCCTACCTAGTTACCGGCAGCACTCGTGGAATCGGCTTCGAATT
GGTCCGCCAATTATCAGAAAAGTCCCCCTCAGAAGTCAGTACCATCATTG
CCACCTCCCGATCGGTCAATGCCTCCCTGCAGGACCTAGCAGACCGGCAT
CCCGGCCGGGTCGTGCTTGTTCCCTTGGATGTTACGGTCCCCGAGTCCAT
CCAGAAGGCCGCCCAGACCGTGGAGAGCATCATGGGCGACAAGGGACTTG
ATGTGCTCATTAACAATGCCGGCATCGTGGGTTGGGGCCAGATTAAGGAC
ATGGCGGACCTGGAAGACACTTTCCGGGTCAACGTGACCGGTCCACATAT
CATCACCCAGAACTTTTTGCCGGTATTGCGAAAGGGCTCTATGAAGAAGA
TCGTCAACATTTCCAGCAGCGTCGGCTCCATTGCAAAGCAGTCCGTTTAC
CGGGAGCTGCCTGCCCCCTCCTATAAAATCACCAAGGCCGCCTTGAATAT
GATGACGGTGCTATACTCCCAAGAGCTTGAGATCGAGGGGTTCACCGTAT
TCTGCGTGAGTCCGGGGTGGTTGAAGACAGACGAAGCCAATGCTCATGCC
GATCTTCCGGTCGGAACTGGAGTCGAGCGCGTTTTGGAGATGATCCGTGA
TAGGGGGGTGGAAGTCAATGGAAGATTTTTAAATATTCATGTTCCTGGGT
GGGAGAATAACCCTGGTTTAAACCAGTATGATGGAAAGGAGCTGCCATGG
TAGATGGCATCCTACCTAGTTACCGGCAGCACTCGTGGAATCGGCTTCGA
ATTGGTCCGCCAATTATCAGAAAAGTCCCCCTCAGAAGTCAGTACCATCA
TTGCCACCTCCCGATCGGTCAATGCCTCCCTGCAGGACCTAGCAGACCGG
CATCCCGGCCGGGTCGTGCTTGTTCCCTTGGATGTTACGGTCCCCGAGTC
CATCCAGAAGGCCGCCCAGACCGTGGAGAGCATCATGGGCGACAAGGGAC
TTGATGTGCTCATTAACAATGCCGGCATCGTGGGTTGGGGCCAGATTAAG
GACATGGCGGACCTGGAAGACACTTTCCGGGTCAACGTGACCGGTCCACA
TATCATCACCCAGAACTTTTTGCCGGTATTGCGAAAGGGCTCTATGAAGA
AGATCGTCAACATTTCCAGCAGCGTCGGCTCCATTGCAAAGCAGTCCGTT
TACCGGGAGCTGCCTGCCCCCTCCTATAAAATCACCAAGGCCGCCTTGAA
TATGATGACGGTGCTATACTCCCAAGAGCTTGAGATCGAGGGGTTCACCG
TATTCTGCGTGAGTCCGGGGTGGTTGAAGACAGACGAAGCCAATGCTCAT
GCCGATCTTCCGGTCGGAACTGGAGTCGAGCGCGTTTTGGAGATGATCCG
TGATAGGGGGGTGGAAGTCAATGGAAGATTTTTAAATATTCATGTTCCTG
GGTGGGAGAATAACCCTGGTTTAAACCAGTATGATGGAAAGGAGCTGCCA
TGGTAGATGGCATCCTACCTAGTTACCGGCAGCACTCGTGGAATCGGCTT
CGAATTGGTCCGCCAATTATCAGAAAAGTCCCCCTCAGAAGTCAGTACCA
TCATTGCCACCTCCCGATCGGTCAATGCCTCCCTGCAGGACCTAGCAGAC
CGGCATCCCGGCCGGGTCGTGCTTGTTCCCTTGGATGTTACGGTCCCCGA
GTCCATCCAGAAGGCCGCCCAGACCGTGGAGAGCATCATGGGCGACAAGG
GACTTGATGTGCTCATTAACAATGCCGGCATCGTGGGTTGGGGCCAGATT
AAGGACATGGCGGACCTGGAAGACACTTTCCGGGTCAACGTGACCGGTCC
ACATATCATCACCCAGAACTTTTTGCCGGTATTGCGAAAGGGCTCTATGA
AGAAGATCGTCAACATTTCCAGCAGCGTCGGCTCCATTGCAAAGCAGTCC
GTTTACCGGGAGCTGCCTGCCCCCTCCTATAAAATCACCAAGGCCGCCTT
GAATATGATGACGGTGCTATACTCCCAAGAGCTTGAGATCGAGGGGTTCA
CCGTATTCTGCGTGAGTCCGGGGTGGTTGAAGACAGACGAAGCCAATGCT
CATGCCGATCTTCCGGTCGGAACTGGAGTCGAGCGCGTTTTGGAGATGAT
CCGTGATAGGGGGGTGGAAGTCAATGGAAGATTTTTAAATATTCATGTTC
CTGGGTGGGAGAATAACCCTGGTTTAAACCAGTATGATGGAAAGGAGCTG
CCATGGTAGATGGCATCCTACCTAGTTACCGGCAGCACTCGTGGAATCGG
CTTCGAATTGGTCCGCCAATTATCAGAAAAGTCCCCCTCAGAAGTCAGTA
CCATCATTGCCACCTCCCGATCGGTCAATGCCTCCCTGCAGGACCTAGCA
GACCGGCATCCCGGCCGGGTCGTGCTTGTTCCCTTGGATGTTACGGTCCC
CGAGTCCATCCAGAAGGCCGCCCAGACCGTGGAGAGCATCATGGGCGACA
AGGGACTTGATGTGCTCATTAACAATGCCGGCATCGTGGGTTGGGGCCAG
ATTAAGGACATGGCGGACCTGGAAGACACTTTCCGGGTCAACGTGACCGG
TCCACATATCATCACCCAGAACTTTTTGCCGGTATTGCGAAAGGGCTCTA
TGAAGAAGATCGTCAACATTTCCAGCAGCGTCGGCTCCATTGCAAAGCAG
TCCGTTTACCGGGAGCTGCCTGCCCCCTCCTATAAAATCACCAAGGCCGC
CTTGAATATGATGACGGTGCTATACTCCCAAGAGCTTGAGATCGAGGGGT
TCACCGTATTCTGCGTGAGTCCGGGGTGGTTGAAGACAGACGAAGCCAAT
GCTCATGCCGATCTTCCGGTCGGAACTGGAGTCGAGCGCGTTTTGGAGAT
GATCCGTGATAGGGGGGTGGAAGTCAATGGAAGATTTTTAAATATTCATG
TTCCTGGGTGGGAGAATAACCCTGGTTTAAACCAGTATGATGGAAAGGAG
CTGCCATGGTAG
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_004558KJC3_004558Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_004558-T1KJC3_004558-T1-proteinAspergillus niger KJC3polypeptide


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_004558-T1.utr5p1KJC3_004558-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_004558-T1.exon1KJC3_004558-T1.exon1Aspergillus niger KJC3exon
KJC3_004558-T1.exon2KJC3_004558-T1.exon2Aspergillus niger KJC3exon
KJC3_004558-T1.exon3KJC3_004558-T1.exon3Aspergillus niger KJC3exon
KJC3_004558-T1.exon4KJC3_004558-T1.exon4Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_004558-T1.cdsKJC3_004558-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_004558-T1.utr3p1KJC3_004558-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR036291
DBxrefInterPro:IPR002347
DBxrefPFAM:PF08659
DBxrefPFAM:PF01370
DBxrefPFAM:PF13561
DBxrefPFAM:PF00106
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch4supercontigch4:97292..98732 +
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