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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch4:170647..171891- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_004589-T1 ID=KJC3_004589-T1|Name=KJC3_004589-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1245bp|location=Sequence derived from alignment at ch4:170647..171891- (Aspergillus niger KJC3)
ATGGCGAAAATCTTTCTGTAGGTACATCCAGGGATTCGTCCTCTTCCTTG
CTACTAACAGAAATCATAGTACAGGAGCCTCAGGTTATATTGGAGGGGAT
GTCCTCCATGCGCTGAAATCGGCCCTTCCAACTTGCCAGTATACAGTCTT
GCTGAGAGACGAGGCGAAGGCTCAGAAACTCTCTCAAGCGTACCCTGATG
TACAAGTAGTCCTGGGAGATTTGGACGCCTCTTCCACTTTGGAACAACAG
GCACGAGAAGCAGATATCGTCATCCGTGAGTGTTCTTGCTTCAATTCTTT
CTGCCTTCTGCTAATATTGGCCTCCTTTCTCAGACACCGCAAGCTCAAAT
CACGTAAAGAGCGCCGAAGCCATCGCGCGTGGATTGACTGCACCGGAAAG
ACCAAAGCCGGGTAATTACCTCCCATTCGTTCCGTCCCCTCACACTTCTC
ATGAATCAAGCAGGTCACTGGCTTCAGATATCAGGCGCAAGCGTCCTTTC
CATTCCTGACATTGTAGCCAGCGCCTTTGGAGGGCCCTCCAACAAGATTT
ACAGCGATGTCGATGGTGCTGATGAGCTGCGGGAGCTCATTCGACAGTAC
TCTGCCAAGCGTGTGGTTGACAATCTAGTCCTCAGCCTTCCCCATACTTC
CTCTCGTCCTAAAACCGCGTTAATATTTCCCCCGATCATTTACGGTCGCG
GTAGGGGACCGATTAACCAGCGGAGCATACAAATCCCGGAGCTGGCAAGA
GTGACCATGCAGCGACGGGGCGGGGTTCAGGTGGGCAGAGGAGAAGCCAC
ATGGAGTAATGTGCACATCTCGGATGTCAGCAACATCTTTGTGAAGCTGG
CCGAGAAGGCTTTGCAAAGTGAGGAAGGGAAATTGTGGAATGAGAACGGG
TTGTATTTCCCCGGTTCCAGGGCTATCGTAAGTTCTTACATGCTCCGACC
TAAGCACAGAACAAGGTACATTCTAACGAGAGTACAGTCATTCGGTTCCA
TCTCAGCACGAGTGGCGCAAGAAGTGAAAAAGCTCGGCCTTGCTGAGTCC
GAGTCGGTAACTGAGATCAGCCATGAAGAGGCCGATTCACTCACGCCTCA
TGGCGGAGTGTTGTGGGGAACCAATGCCCAGCAGGTGGCTCAGCGAGCGG
CCAAGTACCTGAAATGGGTCCCCGAAGGAAGGACGTTGGAAGAGGAAATC
CCACACACTGTTCTTGCCGAGGCCCAGAGACTGGGACTGAAATAG back to topCoding sequence (CDS) from alignment at ch4:170647..171891- >KJC3_004589-T1 ID=KJC3_004589-T1|Name=KJC3_004589-T1|organism=Aspergillus niger KJC3|type=CDS|length=5115bp|location=Sequence derived from alignment at ch4:170647..171891- (Aspergillus niger KJC3)
TCATTCGGTTCCATCTCAGCACGAGTGGCGCAAGAAGTGAAAAAGCTCGG
CCTTGCTGAGTCCGAGTCGGTAACTGAGATCAGCCATGAAGAGGCCGATT
CACTCACGCCTCATGGCGGAGTGTTGTGGGGAACCAATGCCCAGCAGGTG
GCTCAGCGAGCGGCCAAGTACCTGAAATGGGTCCCCGAAGGAAGGACGTT
GGAAGAGGAAATCCCACACACTGTTCTTGCCGAGGCCCAGAGACTGGGAC
TGAAATAGGTCACTGGCTTCAGATATCAGGCGCAAGCGTCCTTTCCATTC
CTGACATTGTAGCCAGCGCCTTTGGAGGGCCCTCCAACAAGATTTACAGC
GATGTCGATGGTGCTGATGAGCTGCGGGAGCTCATTCGACAGTACTCTGC
CAAGCGTGTGGTTGACAATCTAGTCCTCAGCCTTCCCCATACTTCCTCTC
GTCCTAAAACCGCGTTAATATTTCCCCCGATCATTTACGGTCGCGGTAGG
GGACCGATTAACCAGCGGAGCATACAAATCCCGGAGCTGGCAAGAGTGAC
CATGCAGCGACGGGGCGGGGTTCAGGTGGGCAGAGGAGAAGCCACATGGA
GTAATGTGCACATCTCGGATGTCAGCAACATCTTTGTGAAGCTGGCCGAG
AAGGCTTTGCAAAGTGAGGAAGGGAAATTGTGGAATGAGAACGGGTTGTA
TTTCCCCGGTTCCAGGGCTATCACACCGCAAGCTCAAATCACGTAAAGAG
CGCCGAAGCCATCGCGCGTGGATTGACTGCACCGGAAAGACCAAAGCCGG
TACAGGAGCCTCAGGTTATATTGGAGGGGATGTCCTCCATGCGCTGAAAT
CGGCCCTTCCAACTTGCCAGTATACAGTCTTGCTGAGAGACGAGGCGAAG
GCTCAGAAACTCTCTCAAGCGTACCCTGATGTACAAGTAGTCCTGGGAGA
TTTGGACGCCTCTTCCACTTTGGAACAACAGGCACGAGAAGCAGATATCG
TCATCCATGGCGAAAATCTTTCTTCATTCGGTTCCATCTCAGCACGAGTG
GCGCAAGAAGTGAAAAAGCTCGGCCTTGCTGAGTCCGAGTCGGTAACTGA
GATCAGCCATGAAGAGGCCGATTCACTCACGCCTCATGGCGGAGTGTTGT
GGGGAACCAATGCCCAGCAGGTGGCTCAGCGAGCGGCCAAGTACCTGAAA
TGGGTCCCCGAAGGAAGGACGTTGGAAGAGGAAATCCCACACACTGTTCT
TGCCGAGGCCCAGAGACTGGGACTGAAATAGGTCACTGGCTTCAGATATC
AGGCGCAAGCGTCCTTTCCATTCCTGACATTGTAGCCAGCGCCTTTGGAG
GGCCCTCCAACAAGATTTACAGCGATGTCGATGGTGCTGATGAGCTGCGG
GAGCTCATTCGACAGTACTCTGCCAAGCGTGTGGTTGACAATCTAGTCCT
CAGCCTTCCCCATACTTCCTCTCGTCCTAAAACCGCGTTAATATTTCCCC
CGATCATTTACGGTCGCGGTAGGGGACCGATTAACCAGCGGAGCATACAA
ATCCCGGAGCTGGCAAGAGTGACCATGCAGCGACGGGGCGGGGTTCAGGT
GGGCAGAGGAGAAGCCACATGGAGTAATGTGCACATCTCGGATGTCAGCA
ACATCTTTGTGAAGCTGGCCGAGAAGGCTTTGCAAAGTGAGGAAGGGAAA
TTGTGGAATGAGAACGGGTTGTATTTCCCCGGTTCCAGGGCTATCACACC
GCAAGCTCAAATCACGTAAAGAGCGCCGAAGCCATCGCGCGTGGATTGAC
TGCACCGGAAAGACCAAAGCCGGTACAGGAGCCTCAGGTTATATTGGAGG
GGATGTCCTCCATGCGCTGAAATCGGCCCTTCCAACTTGCCAGTATACAG
TCTTGCTGAGAGACGAGGCGAAGGCTCAGAAACTCTCTCAAGCGTACCCT
GATGTACAAGTAGTCCTGGGAGATTTGGACGCCTCTTCCACTTTGGAACA
ACAGGCACGAGAAGCAGATATCGTCATCCATGGCGAAAATCTTTCTTCAT
TCGGTTCCATCTCAGCACGAGTGGCGCAAGAAGTGAAAAAGCTCGGCCTT
GCTGAGTCCGAGTCGGTAACTGAGATCAGCCATGAAGAGGCCGATTCACT
CACGCCTCATGGCGGAGTGTTGTGGGGAACCAATGCCCAGCAGGTGGCTC
AGCGAGCGGCCAAGTACCTGAAATGGGTCCCCGAAGGAAGGACGTTGGAA
GAGGAAATCCCACACACTGTTCTTGCCGAGGCCCAGAGACTGGGACTGAA
ATAGGTCACTGGCTTCAGATATCAGGCGCAAGCGTCCTTTCCATTCCTGA
CATTGTAGCCAGCGCCTTTGGAGGGCCCTCCAACAAGATTTACAGCGATG
TCGATGGTGCTGATGAGCTGCGGGAGCTCATTCGACAGTACTCTGCCAAG
CGTGTGGTTGACAATCTAGTCCTCAGCCTTCCCCATACTTCCTCTCGTCC
TAAAACCGCGTTAATATTTCCCCCGATCATTTACGGTCGCGGTAGGGGAC
CGATTAACCAGCGGAGCATACAAATCCCGGAGCTGGCAAGAGTGACCATG
CAGCGACGGGGCGGGGTTCAGGTGGGCAGAGGAGAAGCCACATGGAGTAA
TGTGCACATCTCGGATGTCAGCAACATCTTTGTGAAGCTGGCCGAGAAGG
CTTTGCAAAGTGAGGAAGGGAAATTGTGGAATGAGAACGGGTTGTATTTC
CCCGGTTCCAGGGCTATCACACCGCAAGCTCAAATCACGTAAAGAGCGCC
GAAGCCATCGCGCGTGGATTGACTGCACCGGAAAGACCAAAGCCGGTACA
GGAGCCTCAGGTTATATTGGAGGGGATGTCCTCCATGCGCTGAAATCGGC
CCTTCCAACTTGCCAGTATACAGTCTTGCTGAGAGACGAGGCGAAGGCTC
AGAAACTCTCTCAAGCGTACCCTGATGTACAAGTAGTCCTGGGAGATTTG
GACGCCTCTTCCACTTTGGAACAACAGGCACGAGAAGCAGATATCGTCAT
CCATGGCGAAAATCTTTCTTCATTCGGTTCCATCTCAGCACGAGTGGCGC
AAGAAGTGAAAAAGCTCGGCCTTGCTGAGTCCGAGTCGGTAACTGAGATC
AGCCATGAAGAGGCCGATTCACTCACGCCTCATGGCGGAGTGTTGTGGGG
AACCAATGCCCAGCAGGTGGCTCAGCGAGCGGCCAAGTACCTGAAATGGG
TCCCCGAAGGAAGGACGTTGGAAGAGGAAATCCCACACACTGTTCTTGCC
GAGGCCCAGAGACTGGGACTGAAATAGGTCACTGGCTTCAGATATCAGGC
GCAAGCGTCCTTTCCATTCCTGACATTGTAGCCAGCGCCTTTGGAGGGCC
CTCCAACAAGATTTACAGCGATGTCGATGGTGCTGATGAGCTGCGGGAGC
TCATTCGACAGTACTCTGCCAAGCGTGTGGTTGACAATCTAGTCCTCAGC
CTTCCCCATACTTCCTCTCGTCCTAAAACCGCGTTAATATTTCCCCCGAT
CATTTACGGTCGCGGTAGGGGACCGATTAACCAGCGGAGCATACAAATCC
CGGAGCTGGCAAGAGTGACCATGCAGCGACGGGGCGGGGTTCAGGTGGGC
AGAGGAGAAGCCACATGGAGTAATGTGCACATCTCGGATGTCAGCAACAT
CTTTGTGAAGCTGGCCGAGAAGGCTTTGCAAAGTGAGGAAGGGAAATTGT
GGAATGAGAACGGGTTGTATTTCCCCGGTTCCAGGGCTATCACACCGCAA
GCTCAAATCACGTAAAGAGCGCCGAAGCCATCGCGCGTGGATTGACTGCA
CCGGAAAGACCAAAGCCGGTACAGGAGCCTCAGGTTATATTGGAGGGGAT
GTCCTCCATGCGCTGAAATCGGCCCTTCCAACTTGCCAGTATACAGTCTT
GCTGAGAGACGAGGCGAAGGCTCAGAAACTCTCTCAAGCGTACCCTGATG
TACAAGTAGTCCTGGGAGATTTGGACGCCTCTTCCACTTTGGAACAACAG
GCACGAGAAGCAGATATCGTCATCCATGGCGAAAATCTTTCTTCATTCGG
TTCCATCTCAGCACGAGTGGCGCAAGAAGTGAAAAAGCTCGGCCTTGCTG
AGTCCGAGTCGGTAACTGAGATCAGCCATGAAGAGGCCGATTCACTCACG
CCTCATGGCGGAGTGTTGTGGGGAACCAATGCCCAGCAGGTGGCTCAGCG
AGCGGCCAAGTACCTGAAATGGGTCCCCGAAGGAAGGACGTTGGAAGAGG
AAATCCCACACACTGTTCTTGCCGAGGCCCAGAGACTGGGACTGAAATAG
GTCACTGGCTTCAGATATCAGGCGCAAGCGTCCTTTCCATTCCTGACATT
GTAGCCAGCGCCTTTGGAGGGCCCTCCAACAAGATTTACAGCGATGTCGA
TGGTGCTGATGAGCTGCGGGAGCTCATTCGACAGTACTCTGCCAAGCGTG
TGGTTGACAATCTAGTCCTCAGCCTTCCCCATACTTCCTCTCGTCCTAAA
ACCGCGTTAATATTTCCCCCGATCATTTACGGTCGCGGTAGGGGACCGAT
TAACCAGCGGAGCATACAAATCCCGGAGCTGGCAAGAGTGACCATGCAGC
GACGGGGCGGGGTTCAGGTGGGCAGAGGAGAAGCCACATGGAGTAATGTG
CACATCTCGGATGTCAGCAACATCTTTGTGAAGCTGGCCGAGAAGGCTTT
GCAAAGTGAGGAAGGGAAATTGTGGAATGAGAACGGGTTGTATTTCCCCG
GTTCCAGGGCTATCACACCGCAAGCTCAAATCACGTAAAGAGCGCCGAAG
CCATCGCGCGTGGATTGACTGCACCGGAAAGACCAAAGCCGGTACAGGAG
CCTCAGGTTATATTGGAGGGGATGTCCTCCATGCGCTGAAATCGGCCCTT
CCAACTTGCCAGTATACAGTCTTGCTGAGAGACGAGGCGAAGGCTCAGAA
ACTCTCTCAAGCGTACCCTGATGTACAAGTAGTCCTGGGAGATTTGGACG
CCTCTTCCACTTTGGAACAACAGGCACGAGAAGCAGATATCGTCATCCAT
GGCGAAAATCTTTCT back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| Note | antiSMASH:Cluster_4.3 |
| Note | SMCOG1010:NAD-dependent epimerase/dehydratase |
| DBxref | InterPro:IPR036291 |
| DBxref | InterPro:IPR016040 |
| DBxref | PFAM:PF13460 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch4 | supercontig | ch4:170647..171891 - |
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