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KJC3_004602-T1, KJC3_004602-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_004602-T1
Unique NameKJC3_004602-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch4:197915..199458-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_004602-T1 ID=KJC3_004602-T1|Name=KJC3_004602-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1544bp|location=Sequence derived from alignment at ch4:197915..199458- (Aspergillus niger KJC3)
GACTTTCCAGGCCCCTATTCACTCACTACCGTTAATATTTTCCTCCACGC
TCTTTTTGTTCTTATATGTCTTTTGTTGCTTGCTGTTGCTTTCCGTTCAC
TCCAAAAATGCTGGGCGCCAGGGATTCCGCCAGTTATGACTTCGCATTCT
ATCGCTATGACCCCAGTATGGGTGGCGCCGTTCTTTTCATCCTCCTGTTC
ATCGGCACAACAGGGTATCATGTCTTCCAAATGGTCAAGTCTCGCACATG
GTTCTTCATCCCATTTGTGATCGGAGGTATATGTATGAGCACCTTCCAAT
GTGCGTGAGTGTTGAACCATCATGCTAATTTTCCTAGTCGAGATTATCGG
ATATATCGGACGTGCCATGTCTAGCAAGCAAAGTCCAAATTGGACGCTCG
GACCCTACATCGTGCAGACGCTCTTTCTTTTACTCGCCCCAGCTCTCCTC
GCAGCCTCCATATACATGCTACTCGGTCGGATTATCCTTGTGTTACAAGC
CGAATCACACGCTCTCTTGAAGAAGAAATGGTTAACCAAGATATTTGTCA
CGGGTGATGTCCTTTCATTTTTATTGCAGGGAGCGGGTACGTATCGCATA
AGGCAACCCCATATTACCAAATAGTTCTCTGACCCTGACCAGGTGGCGGC
ATTCAGGCCAGTGGAAGCCTGGCCGGCATGAAGAATGGCGAGCACATCAT
CGTCGTTGGTCTCGTGATCCAAATATTCTTCTTCGCATTCTTTATGGTCA
CTGCGACGCACTTTTACTTGAAGGTCCATAAATATCCCTTCCCGCGATCT
TGTTCTCCACATATTCCTTGGAAGAAACACATGAAGGTACTCTATGCGAC
GAGCATATTGATCATGGTTCGATCCATGTTTCGATTGATTGAGTATATTC
AGGGGAACAATGGGTACCTCTTACACCATGAAGCCTTTCTCTACATATTT
GATGCATTGTTGATGTTTATCACCATGATAATATTCAATGCTGTCCATCC
GCAAGAAATCGGTCAACTACTCCGTCATCCAAATGACTATAGTATGGCGA
CTCTTCCAGAAGAGCAGGCTCCGAATCCTTACCAAGGCTGCAATAATGTG
TGAGGAAGTTGTAGCATTCTTGCTACTTTGGTTCGTCATCCTATGTGTTA
CCGTCCGCAATACATCCGTTACGTTTGTGTTCTTCTTCTTTCCCGGCCCA
ACTATTGATTTTGGGCTCTATCTACATTAAATAAGATCCGAGATTCATCG
AGGATGAACAGGCCTTTCCAGTTTATTGGGCTTGAGTCATGGAGCCTAAT
TCCGATCACGTGTGTTTTAGGTCGTGGCTCATGCAATCAGAAACGATACA
ATAATGAGAATATGTGCGAGTTGGCTATGTACCATCCATTTTATTGTCGC
TTCAGGATGGTGGGACTAAGCTATCCTGATGGGATCAGTCAAGGCGGGTA
CTTCAACACGAGACTAGGAAGTAGTACACAATAGGGCTGCCTCTCAGCGA
AAACCCCAAAACCAAACATTTCTAGATCAGACAATCAATTGCGG
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Coding sequence (CDS) from alignment at ch4:197915..199458-

>KJC3_004602-T1 ID=KJC3_004602-T1|Name=KJC3_004602-T1|organism=Aspergillus niger KJC3|type=CDS|length=2781bp|location=Sequence derived from alignment at ch4:197915..199458- (Aspergillus niger KJC3)
GTGGCGGCATTCAGGCCAGTGGAAGCCTGGCCGGCATGAAGAATGGCGAG
CACATCATCGTCGTTGGTCTCGTGATCCAAATATTCTTCTTCGCATTCTT
TATGGTCACTGCGACGCACTTTTACTTGAAGGTCCATAAATATCCCTTCC
CGCGATCTTGTTCTCCACATATTCCTTGGAAGAAACACATGAAGGTACTC
TATGCGACGAGCATATTGATCATGGTTCGATCCATGTTTCGATTGATTGA
GTATATTCAGGGGAACAATGGGTACCTCTTACACCATGAAGCCTTTCTCT
ACATATTTGATGCATTGTTGATGTTTATCACCATGATAATATTCAATGCT
GTCCATCCGCAAGAAATCGGTCAACTACTCCGTCATCCAAATGACTATAG
TATGGCGACTCTTCCAGAAGAGCAGGCTCCGAATCCTTACCAAGGCTGCA
ATAATGTGTGATCGAGATTATCGGATATATCGGACGTGCCATGTCTAGCA
AGCAAAGTCCAAATTGGACGCTCGGACCCTACATCGTGCAGACGCTCTTT
CTTTTACTCGCCCCAGCTCTCCTCGCAGCCTCCATATACATGCTACTCGG
TCGGATTATCCTTGTGTTACAAGCCGAATCACACGCTCTCTTGAAGAAGA
AATGGTTAACCAAGATATTTGTCACGGGTGATGTCCTTTCATTTTTATTG
CAGGGAGCGGATGTCTTTTGTTGCTTGCTGTTGCTTTCCGTTCACTCCAA
AAATGCTGGGCGCCAGGGATTCCGCCAGTTATGACTTCGCATTCTATCGC
TATGACCCCAGTATGGGTGGCGCCGTTCTTTTCATCCTCCTGTTCATCGG
CACAACAGGGTATCATGTCTTCCAAATGGTCAAGTCTCGCACATGGTTCT
TCATCCCATTTGTGATCGGAGGTATATGTGGCGGCATTCAGGCCAGTGGA
AGCCTGGCCGGCATGAAGAATGGCGAGCACATCATCGTCGTTGGTCTCGT
GATCCAAATATTCTTCTTCGCATTCTTTATGGTCACTGCGACGCACTTTT
ACTTGAAGGTCCATAAATATCCCTTCCCGCGATCTTGTTCTCCACATATT
CCTTGGAAGAAACACATGAAGGTACTCTATGCGACGAGCATATTGATCAT
GGTTCGATCCATGTTTCGATTGATTGAGTATATTCAGGGGAACAATGGGT
ACCTCTTACACCATGAAGCCTTTCTCTACATATTTGATGCATTGTTGATG
TTTATCACCATGATAATATTCAATGCTGTCCATCCGCAAGAAATCGGTCA
ACTACTCCGTCATCCAAATGACTATAGTATGGCGACTCTTCCAGAAGAGC
AGGCTCCGAATCCTTACCAAGGCTGCAATAATGTGTGATCGAGATTATCG
GATATATCGGACGTGCCATGTCTAGCAAGCAAAGTCCAAATTGGACGCTC
GGACCCTACATCGTGCAGACGCTCTTTCTTTTACTCGCCCCAGCTCTCCT
CGCAGCCTCCATATACATGCTACTCGGTCGGATTATCCTTGTGTTACAAG
CCGAATCACACGCTCTCTTGAAGAAGAAATGGTTAACCAAGATATTTGTC
ACGGGTGATGTCCTTTCATTTTTATTGCAGGGAGCGGATGTCTTTTGTTG
CTTGCTGTTGCTTTCCGTTCACTCCAAAAATGCTGGGCGCCAGGGATTCC
GCCAGTTATGACTTCGCATTCTATCGCTATGACCCCAGTATGGGTGGCGC
CGTTCTTTTCATCCTCCTGTTCATCGGCACAACAGGGTATCATGTCTTCC
AAATGGTCAAGTCTCGCACATGGTTCTTCATCCCATTTGTGATCGGAGGT
ATATGTGGCGGCATTCAGGCCAGTGGAAGCCTGGCCGGCATGAAGAATGG
CGAGCACATCATCGTCGTTGGTCTCGTGATCCAAATATTCTTCTTCGCAT
TCTTTATGGTCACTGCGACGCACTTTTACTTGAAGGTCCATAAATATCCC
TTCCCGCGATCTTGTTCTCCACATATTCCTTGGAAGAAACACATGAAGGT
ACTCTATGCGACGAGCATATTGATCATGGTTCGATCCATGTTTCGATTGA
TTGAGTATATTCAGGGGAACAATGGGTACCTCTTACACCATGAAGCCTTT
CTCTACATATTTGATGCATTGTTGATGTTTATCACCATGATAATATTCAA
TGCTGTCCATCCGCAAGAAATCGGTCAACTACTCCGTCATCCAAATGACT
ATAGTATGGCGACTCTTCCAGAAGAGCAGGCTCCGAATCCTTACCAAGGC
TGCAATAATGTGTGATCGAGATTATCGGATATATCGGACGTGCCATGTCT
AGCAAGCAAAGTCCAAATTGGACGCTCGGACCCTACATCGTGCAGACGCT
CTTTCTTTTACTCGCCCCAGCTCTCCTCGCAGCCTCCATATACATGCTAC
TCGGTCGGATTATCCTTGTGTTACAAGCCGAATCACACGCTCTCTTGAAG
AAGAAATGGTTAACCAAGATATTTGTCACGGGTGATGTCCTTTCATTTTT
ATTGCAGGGAGCGGATGTCTTTTGTTGCTTGCTGTTGCTTTCCGTTCACT
CCAAAAATGCTGGGCGCCAGGGATTCCGCCAGTTATGACTTCGCATTCTA
TCGCTATGACCCCAGTATGGGTGGCGCCGTTCTTTTCATCCTCCTGTTCA
TCGGCACAACAGGGTATCATGTCTTCCAAATGGTCAAGTCTCGCACATGG
TTCTTCATCCCATTTGTGATCGGAGGTATAT
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_004602KJC3_004602Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_004602-T1KJC3_004602-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_004602-T1.cdsKJC3_004602-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_004602-T1.utr3p2KJC3_004602-T1.utr3p2Aspergillus niger KJC3three_prime_UTR
KJC3_004602-T1.utr3p1KJC3_004602-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_004602-T1.exon4KJC3_004602-T1.exon4Aspergillus niger KJC3exon
KJC3_004602-T1.exon3KJC3_004602-T1.exon3Aspergillus niger KJC3exon
KJC3_004602-T1.exon2KJC3_004602-T1.exon2Aspergillus niger KJC3exon
KJC3_004602-T1.exon1KJC3_004602-T1.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_004602-T1.utr5p1KJC3_004602-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
NoteantiSMASH:Cluster_4.4
DBxrefInterPro:IPR007568
DBxrefPFAM:PF04479
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch4supercontigch4:197915..199458 -
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