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KJC3_004604-T1, KJC3_004604-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_004604-T1
Unique NameKJC3_004604-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch4:202913..203641-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_004604-T1 ID=KJC3_004604-T1|Name=KJC3_004604-T1|organism=Aspergillus niger KJC3|type=mRNA|length=729bp|location=Sequence derived from alignment at ch4:202913..203641- (Aspergillus niger KJC3)
ATGAACCAGGAAGCTCGCAATATCAGCATTATCCAGGGCAACAACATCGC
CTTTATCAAAACGTATCCTGGAGGGTCTGGTTACGTCAAAGACGTCACCT
TCGAAAATTTCCGCTCTTTGAACAGCCTGTACGGATTGGACATCAACCAA
TACTGGCAAAACACATGGGAGCCTGATACCGGTTCCGTGACATTGAGCAA
CCTTGTCTTCAAGAACTTCTCAGGTAATCTCGGCTCGTGTATCCAGTGAA
TGCAGCCCTCGTACTGATGCACAAACATAGGATCGGTTGCCGATGGAGCA
CTCCGCCCGCCATTGTATCTGTTTGCAAGTGACTTGACATTTGCAACGAA
CGTCACCGTGGAGGAATTCTCTGTCTGGACTGAGACTGGTACAACAGTCG
TCAACAAGATCAGCAATATCTTCGGCACTGGGGATGATAGCTATGGAGAG
AATGATGGCATTGAGAGCCTCCAATCTGGAGAGTCGCCGTATACGTATAC
TAGCACCTATACTATTACGGCTTCTCCCACCAATTGGCAAGCTCCATCAA
CCCCAACCTGGGCTTTACCGAGCACTGGATATGGAAGTAAGTTCAACGAG
AATTGTTCTGGTTATTTTTACATAGCTAACTTATCTACAGCTGCGTCACC
TATTCCAGTCTATACTCCCGCACCTCTTTGGCGCCCTGGTGGAATTGACT
ATAACCTCCATTATTGGGGAAGCTTTTAG
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Coding sequence (CDS) from alignment at ch4:202913..203641-

>KJC3_004604-T1 ID=KJC3_004604-T1|Name=KJC3_004604-T1|organism=Aspergillus niger KJC3|type=CDS|length=1854bp|location=Sequence derived from alignment at ch4:202913..203641- (Aspergillus niger KJC3)
CTGCGTCACCTATTCCAGTCTATACTCCCGCACCTCTTTGGCGCCCTGGT
GGAATTGACTATAACCTCCATTATTGGGGAAGCTTTTAGGATCGGTTGCC
GATGGAGCACTCCGCCCGCCATTGTATCTGTTTGCAAGTGACTTGACATT
TGCAACGAACGTCACCGTGGAGGAATTCTCTGTCTGGACTGAGACTGGTA
CAACAGTCGTCAACAAGATCAGCAATATCTTCGGCACTGGGGATGATAGC
TATGGAGAGAATGATGGCATTGAGAGCCTCCAATCTGGAGAGTCGCCGTA
TACGTATACTAGCACCTATACTATTACGGCTTCTCCCACCAATTGGCAAG
CTCCATCAACCCCAACCTGGGCTTTACCGAGCACTGGATATGGAAATGAA
CCAGGAAGCTCGCAATATCAGCATTATCCAGGGCAACAACATCGCCTTTA
TCAAAACGTATCCTGGAGGGTCTGGTTACGTCAAAGACGTCACCTTCGAA
AATTTCCGCTCTTTGAACAGCCTGTACGGATTGGACATCAACCAATACTG
GCAAAACACATGGGAGCCTGATACCGGTTCCGTGACATTGAGCAACCTTG
TCTTCAAGAACTTCTCAGCTGCGTCACCTATTCCAGTCTATACTCCCGCA
CCTCTTTGGCGCCCTGGTGGAATTGACTATAACCTCCATTATTGGGGAAG
CTTTTAGGATCGGTTGCCGATGGAGCACTCCGCCCGCCATTGTATCTGTT
TGCAAGTGACTTGACATTTGCAACGAACGTCACCGTGGAGGAATTCTCTG
TCTGGACTGAGACTGGTACAACAGTCGTCAACAAGATCAGCAATATCTTC
GGCACTGGGGATGATAGCTATGGAGAGAATGATGGCATTGAGAGCCTCCA
ATCTGGAGAGTCGCCGTATACGTATACTAGCACCTATACTATTACGGCTT
CTCCCACCAATTGGCAAGCTCCATCAACCCCAACCTGGGCTTTACCGAGC
ACTGGATATGGAAATGAACCAGGAAGCTCGCAATATCAGCATTATCCAGG
GCAACAACATCGCCTTTATCAAAACGTATCCTGGAGGGTCTGGTTACGTC
AAAGACGTCACCTTCGAAAATTTCCGCTCTTTGAACAGCCTGTACGGATT
GGACATCAACCAATACTGGCAAAACACATGGGAGCCTGATACCGGTTCCG
TGACATTGAGCAACCTTGTCTTCAAGAACTTCTCAGCTGCGTCACCTATT
CCAGTCTATACTCCCGCACCTCTTTGGCGCCCTGGTGGAATTGACTATAA
CCTCCATTATTGGGGAAGCTTTTAGGATCGGTTGCCGATGGAGCACTCCG
CCCGCCATTGTATCTGTTTGCAAGTGACTTGACATTTGCAACGAACGTCA
CCGTGGAGGAATTCTCTGTCTGGACTGAGACTGGTACAACAGTCGTCAAC
AAGATCAGCAATATCTTCGGCACTGGGGATGATAGCTATGGAGAGAATGA
TGGCATTGAGAGCCTCCAATCTGGAGAGTCGCCGTATACGTATACTAGCA
CCTATACTATTACGGCTTCTCCCACCAATTGGCAAGCTCCATCAACCCCA
ACCTGGGCTTTACCGAGCACTGGATATGGAAATGAACCAGGAAGCTCGCA
ATATCAGCATTATCCAGGGCAACAACATCGCCTTTATCAAAACGTATCCT
GGAGGGTCTGGTTACGTCAAAGACGTCACCTTCGAAAATTTCCGCTCTTT
GAACAGCCTGTACGGATTGGACATCAACCAATACTGGCAAAACACATGGG
AGCCTGATACCGGTTCCGTGACATTGAGCAACCTTGTCTTCAAGAACTTC
TCAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0004650polygalacturonase activity
Vocabulary: Biological Process
TermDefinition
GO:0005975carbohydrate metabolic process
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_004604KJC3_004604Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_004604-T1KJC3_004604-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_004604-T1.cdsKJC3_004604-T1.cdsAspergillus niger KJC3CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_004604-T1.exon3KJC3_004604-T1.exon3Aspergillus niger KJC3exon
KJC3_004604-T1.exon2KJC3_004604-T1.exon2Aspergillus niger KJC3exon
KJC3_004604-T1.exon1KJC3_004604-T1.exon1Aspergillus niger KJC3exon


Properties
Property NameValue
NoteantiSMASH:Cluster_4.4
DBxrefInterPro:IPR011050
DBxrefInterPro:IPR000743
DBxrefInterPro:IPR012334
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch4supercontigch4:202913..203641 -
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