You are here

Home

KJC3_004619-T1, KJC3_004619-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_004619-T1
Unique NameKJC3_004619-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch4:236719..238760+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_004619-T1 ID=KJC3_004619-T1|Name=KJC3_004619-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2042bp|location=Sequence derived from alignment at ch4:236719..238760+ (Aspergillus niger KJC3)
ATGGCTCAGCCATATTTCGCACATTGCTCACTGCATGATAACAACTCGCA
GCCTTTGATGCAGGCCGAAGATGAACAGGAATTTAGACAATTTCATTCAC
TCCCAAAACCACCTGCTCTTTACCTGAAGGGAGCCTCCCACAGCCATAAT
AGTTGGTACGAAGCGCATCCCCTACTGAAATACTCCTTTTTAACTCATCC
TTCAACAGGTGGCGGCGCTGGCGGCATTGCTGTCGCAGCTCGCCTCGCCA
AAAAAGGTTACAAAGTAACAGTGGTCGAGAAGAATGCAGACATCGGAGGG
CGATGTTCCCTAATGCAGGAGAATGACTACGTGTGTCCATCTATATATCT
CAGTACAATACTAACCGCATCAGCGCTTCGACCAAGGCCCCTCCCTCCTC
CTTATGCCGTCCTTCTTCCACCAGATATTCCACGACCTGGACACCTCCAT
CTCCGCCGAAGGCATCACCCTCCGCAAATGCGACCTCAGCTACCGCATCT
GGTTCCCGGATCACGACCACCTCGACTTATCCACTGATATTCCGTCGATG
AAAGAGCAAATAGAAGCTCACGAAGGGCCGTATGGATTTGAGGGGTTTCT
GCGTTTCCTGGTCGAATCCGGCCGACACTACAACTTATCTTGCGAACATA
TTCTGCACCGTAACTTCGCAACCATTTGGAGTCTACTCCGATGGGACCTC
CTCTTGGCCTTACCCAGACTCCACGTCTTCGAAAGCATATACACCCGTGC
GAGTCGGTACTTCCACTCCGACAAACTCCGCCAGGCATTTACATTCGACA
GTATGTACCTTGGCATGAGCCCGTTTGATGCTCCAGCGACATACTCTCTA
CTACAGTATACCGAGATGACAGATGGGATATGGTATCCTATCGGTGGATT
CAGAACTGTACGTACATCCGTTCCCTCTCCCCCCTTTTCATACTATCCAT
GATTGTATCTGAAATACATAGATCCTCGACGCCCTCGTCAAAATCAGTAT
CCGCCACGGCACCACCTACATCCTCAACACCCCCGTAACCTCCATCGAGC
TCAGCGACGACCATCAACACATAACGGGCGTGCGACTCTCCACCGGAGAA
ACCCTCTCAGCAGATATAGTGATCGTCAACGCCGACATAACCTACGCATA
CAACAACCTCCTCCTCTCCAAAACCACCTACAGCAAATCCCTACAAAACA
AACCTACCTCCTGCAGCAGCATCTCCTTCTACTGGGGACTAGACACCACC
CTCCCCAACCTCCAATCCCACAACATATTCCTCCCAGATTCAACAACATA
CAAATCCAGCTTCGACACCATCTTCAAGAAACACCAAATCCCAGACCATC
CCTCATTCTACCTGCACATCCCAAGCAGAATTGACCCCTCAGCCTCACCC
CCAAACACAGATGCAATAGTAATCCTAGTCCCAGTCCCTCACCTCTTACC
CCCATCACCTTCCTCCTCGTCCTCCTCCTCATCACCAACATCCGCCCTAA
ACCCCCACAATACAACCGCCTACTGGCACGAAACAACCCAAACCATCCGC
TCCCTCATCCCCAGCACTATCCATGACCGCACAGGCAACTCCATCGAATC
ACACATCGTGTGCGAGAGGATCGAGACCCCATTCACCTGGAAAAAGAAAT
ACAATTTGGATCGCGGGGCGATATTAGGTCTTTCGCATTCATTTTTCAAT
GTGTTGTGCTTTAGGCCGAGGATTCAACATGAGAGTATCGGGGGGTTGTT
TTTTGTCGGGGCTAGTACGCATCCGGGGAGTGGAGTGCCGGTTGTGCTTG
GGGGAAGTGGGGTTGTTGTTGGGGTGGTGGAGGAGTGGGTGAGGAGGATG
AAGGGGGGAGATATAAGGATGAGTAAGGGGAGGTTGTGGATGTGGGTTGG
TGGTGTTGTTGTTGTGCTGAGTGTGATTGTAGTGATGGTGATGGGCATGA
GGATGAGGATGGGGATGCGTGAGTGGTTTTGTGGGCTAGAAGACGCGTGG
ATGGAGAGTGGTGATAGGTCGAGTTGGAGGATGTTGCTGTGA
back to top

Coding sequence (CDS) from alignment at ch4:236719..238760+

>KJC3_004619-T1 ID=KJC3_004619-T1|Name=KJC3_004619-T1|organism=Aspergillus niger KJC3|type=CDS|length=5805bp|location=Sequence derived from alignment at ch4:236719..238760+ (Aspergillus niger KJC3)
ATGGCTCAGCCATATTTCGCACATTGCTCACTGCATGATAACAACTCGCA
GCCTTTGATGCAGGCCGAAGATGAACAGGAATTTAGACAATTTCATTCAC
TCCCAAAACCACCTGCTCTTTACCTGAAGGGAGCCTCCCACAGCCATAAT
AGTTGGTACGAAGCGCATCCCCTACTGAAATACTCCTTTTTAACTCATCC
TTCAACAGGTGGCGGCGCTGGCGGCATTGCTGTCGCAGCTCGCCTCGCCA
AAAAAGGTTACAAAGTAACAGTGGTCGAGAAGAATGCAGACATCGGAGGG
CGATGTTCCCTAATGCAGGAGAATGACTACCGCTTCGACCAAGGCCCCTC
CCTCCTCCTTATGCCGTCCTTCTTCCACCAGATATTCCACGACCTGGACA
CCTCCATCTCCGCCGAAGGCATCACCCTCCGCAAATGCGACCTCAGCTAC
CGCATCTGGTTCCCGGATCACGACCACCTCGACTTATCCACTGATATTCC
GTCGATGAAAGAGCAAATAGAAGCTCACGAAGGGCCGTATGGATTTGAGG
GGTTTCTGCGTTTCCTGGTCGAATCCGGCCGACACTACAACTTATCTTGC
GAACATATTCTGCACCGTAACTTCGCAACCATTTGGAGTCTACTCCGATG
GGACCTCCTCTTGGCCTTACCCAGACTCCACGTCTTCGAAAGCATATACA
CCCGTGCGAGTCGGTACTTCCACTCCGACAAACTCCGCCAGGCATTTACA
TTCGACAGTATGTACCTTGGCATGAGCCCGTTTGATGCTCCAGCGACATA
CTCTCTACTACAGTATACCGAGATGACAGATGGGATATGGTATCCTATCG
GTGGATTCAGAACTATCCTCGACGCCCTCGTCAAAATCAGTATCCGCCAC
GGCACCACCTACATCCTCAACACCCCCGTAACCTCCATCGAGCTCAGCGA
CGACCATCAACACATAACGGGCGTGCGACTCTCCACCGGAGAAACCCTCT
CAGCAGATATAGTGATCGTCAACGCCGACATAACCTACGCATACAACAAC
CTCCTCCTCTCCAAAACCACCTACAGCAAATCCCTACAAAACAAACCTAC
CTCCTGCAGCAGCATCTCCTTCTACTGGGGACTAGACACCACCCTCCCCA
ACCTCCAATCCCACAACATATTCCTCCCAGATTCAACAACATACAAATCC
AGCTTCGACACCATCTTCAAGAAACACCAAATCCCAGACCATCCCTCATT
CTACCTGCACATCCCAAGCAGAATTGACCCCTCAGCCTCACCCCCAAACA
CAGATGCAATAGTAATCCTAGTCCCAGTCCCTCACCTCTTACCCCCATCA
CCTTCCTCCTCGTCCTCCTCCTCATCACCAACATCCGCCCTAAACCCCCA
CAATACAACCGCCTACTGGCACGAAACAACCCAAACCATCCGCTCCCTCA
TCCCCAGCACTATCCATGACCGCACAGGCAACTCCATCGAATCACACATC
GTGTGCGAGAGGATCGAGACCCCATTCACCTGGAAAAAGAAATACAATTT
GGATCGCGGGGCGATATTAGGTCTTTCGCATTCATTTTTCAATGTGTTGT
GCTTTAGGCCGAGGATTCAACATGAGAGTATCGGGGGGTTGTTTTTTGTC
GGGGCTAGTACGCATCCGGGGAGTGGAGTGCCGGTTGTGCTTGGGGGAAG
TGGGGTTGTTGTTGGGGTGGTGGAGGAGTGGGTGAGGAGGATGAAGGGGG
GAGATATAAGGATGAGTAAGGGGAGGTTGTGGATGTGGGTTGGTGGTGTT
GTTGTTGTGCTGAGTGTGATTGTAGTGATGGTGATGGGCATGAGGATGAG
GATGGGGATGCGTGAGTGGTTTTGTGGGCTAGAAGACGCGTGGATGGAGA
GTGGTGATAGGTCGAGTTGGAGGATGTTGCTGTGAATGGCTCAGCCATAT
TTCGCACATTGCTCACTGCATGATAACAACTCGCAGCCTTTGATGCAGGC
CGAAGATGAACAGGAATTTAGACAATTTCATTCACTCCCAAAACCACCTG
CTCTTTACCTGAAGGGAGCCTCCCACAGCCATAATAGTTGGTACGAAGCG
CATCCCCTACTGAAATACTCCTTTTTAACTCATCCTTCAACAGGTGGCGG
CGCTGGCGGCATTGCTGTCGCAGCTCGCCTCGCCAAAAAAGGTTACAAAG
TAACAGTGGTCGAGAAGAATGCAGACATCGGAGGGCGATGTTCCCTAATG
CAGGAGAATGACTACCGCTTCGACCAAGGCCCCTCCCTCCTCCTTATGCC
GTCCTTCTTCCACCAGATATTCCACGACCTGGACACCTCCATCTCCGCCG
AAGGCATCACCCTCCGCAAATGCGACCTCAGCTACCGCATCTGGTTCCCG
GATCACGACCACCTCGACTTATCCACTGATATTCCGTCGATGAAAGAGCA
AATAGAAGCTCACGAAGGGCCGTATGGATTTGAGGGGTTTCTGCGTTTCC
TGGTCGAATCCGGCCGACACTACAACTTATCTTGCGAACATATTCTGCAC
CGTAACTTCGCAACCATTTGGAGTCTACTCCGATGGGACCTCCTCTTGGC
CTTACCCAGACTCCACGTCTTCGAAAGCATATACACCCGTGCGAGTCGGT
ACTTCCACTCCGACAAACTCCGCCAGGCATTTACATTCGACAGTATGTAC
CTTGGCATGAGCCCGTTTGATGCTCCAGCGACATACTCTCTACTACAGTA
TACCGAGATGACAGATGGGATATGGTATCCTATCGGTGGATTCAGAACTA
TCCTCGACGCCCTCGTCAAAATCAGTATCCGCCACGGCACCACCTACATC
CTCAACACCCCCGTAACCTCCATCGAGCTCAGCGACGACCATCAACACAT
AACGGGCGTGCGACTCTCCACCGGAGAAACCCTCTCAGCAGATATAGTGA
TCGTCAACGCCGACATAACCTACGCATACAACAACCTCCTCCTCTCCAAA
ACCACCTACAGCAAATCCCTACAAAACAAACCTACCTCCTGCAGCAGCAT
CTCCTTCTACTGGGGACTAGACACCACCCTCCCCAACCTCCAATCCCACA
ACATATTCCTCCCAGATTCAACAACATACAAATCCAGCTTCGACACCATC
TTCAAGAAACACCAAATCCCAGACCATCCCTCATTCTACCTGCACATCCC
AAGCAGAATTGACCCCTCAGCCTCACCCCCAAACACAGATGCAATAGTAA
TCCTAGTCCCAGTCCCTCACCTCTTACCCCCATCACCTTCCTCCTCGTCC
TCCTCCTCATCACCAACATCCGCCCTAAACCCCCACAATACAACCGCCTA
CTGGCACGAAACAACCCAAACCATCCGCTCCCTCATCCCCAGCACTATCC
ATGACCGCACAGGCAACTCCATCGAATCACACATCGTGTGCGAGAGGATC
GAGACCCCATTCACCTGGAAAAAGAAATACAATTTGGATCGCGGGGCGAT
ATTAGGTCTTTCGCATTCATTTTTCAATGTGTTGTGCTTTAGGCCGAGGA
TTCAACATGAGAGTATCGGGGGGTTGTTTTTTGTCGGGGCTAGTACGCAT
CCGGGGAGTGGAGTGCCGGTTGTGCTTGGGGGAAGTGGGGTTGTTGTTGG
GGTGGTGGAGGAGTGGGTGAGGAGGATGAAGGGGGGAGATATAAGGATGA
GTAAGGGGAGGTTGTGGATGTGGGTTGGTGGTGTTGTTGTTGTGCTGAGT
GTGATTGTAGTGATGGTGATGGGCATGAGGATGAGGATGGGGATGCGTGA
GTGGTTTTGTGGGCTAGAAGACGCGTGGATGGAGAGTGGTGATAGGTCGA
GTTGGAGGATGTTGCTGTGAATGGCTCAGCCATATTTCGCACATTGCTCA
CTGCATGATAACAACTCGCAGCCTTTGATGCAGGCCGAAGATGAACAGGA
ATTTAGACAATTTCATTCACTCCCAAAACCACCTGCTCTTTACCTGAAGG
GAGCCTCCCACAGCCATAATAGTTGGTACGAAGCGCATCCCCTACTGAAA
TACTCCTTTTTAACTCATCCTTCAACAGGTGGCGGCGCTGGCGGCATTGC
TGTCGCAGCTCGCCTCGCCAAAAAAGGTTACAAAGTAACAGTGGTCGAGA
AGAATGCAGACATCGGAGGGCGATGTTCCCTAATGCAGGAGAATGACTAC
CGCTTCGACCAAGGCCCCTCCCTCCTCCTTATGCCGTCCTTCTTCCACCA
GATATTCCACGACCTGGACACCTCCATCTCCGCCGAAGGCATCACCCTCC
GCAAATGCGACCTCAGCTACCGCATCTGGTTCCCGGATCACGACCACCTC
GACTTATCCACTGATATTCCGTCGATGAAAGAGCAAATAGAAGCTCACGA
AGGGCCGTATGGATTTGAGGGGTTTCTGCGTTTCCTGGTCGAATCCGGCC
GACACTACAACTTATCTTGCGAACATATTCTGCACCGTAACTTCGCAACC
ATTTGGAGTCTACTCCGATGGGACCTCCTCTTGGCCTTACCCAGACTCCA
CGTCTTCGAAAGCATATACACCCGTGCGAGTCGGTACTTCCACTCCGACA
AACTCCGCCAGGCATTTACATTCGACAGTATGTACCTTGGCATGAGCCCG
TTTGATGCTCCAGCGACATACTCTCTACTACAGTATACCGAGATGACAGA
TGGGATATGGTATCCTATCGGTGGATTCAGAACTATCCTCGACGCCCTCG
TCAAAATCAGTATCCGCCACGGCACCACCTACATCCTCAACACCCCCGTA
ACCTCCATCGAGCTCAGCGACGACCATCAACACATAACGGGCGTGCGACT
CTCCACCGGAGAAACCCTCTCAGCAGATATAGTGATCGTCAACGCCGACA
TAACCTACGCATACAACAACCTCCTCCTCTCCAAAACCACCTACAGCAAA
TCCCTACAAAACAAACCTACCTCCTGCAGCAGCATCTCCTTCTACTGGGG
ACTAGACACCACCCTCCCCAACCTCCAATCCCACAACATATTCCTCCCAG
ATTCAACAACATACAAATCCAGCTTCGACACCATCTTCAAGAAACACCAA
ATCCCAGACCATCCCTCATTCTACCTGCACATCCCAAGCAGAATTGACCC
CTCAGCCTCACCCCCAAACACAGATGCAATAGTAATCCTAGTCCCAGTCC
CTCACCTCTTACCCCCATCACCTTCCTCCTCGTCCTCCTCCTCATCACCA
ACATCCGCCCTAAACCCCCACAATACAACCGCCTACTGGCACGAAACAAC
CCAAACCATCCGCTCCCTCATCCCCAGCACTATCCATGACCGCACAGGCA
ACTCCATCGAATCACACATCGTGTGCGAGAGGATCGAGACCCCATTCACC
TGGAAAAAGAAATACAATTTGGATCGCGGGGCGATATTAGGTCTTTCGCA
TTCATTTTTCAATGTGTTGTGCTTTAGGCCGAGGATTCAACATGAGAGTA
TCGGGGGGTTGTTTTTTGTCGGGGCTAGTACGCATCCGGGGAGTGGAGTG
CCGGTTGTGCTTGGGGGAAGTGGGGTTGTTGTTGGGGTGGTGGAGGAGTG
GGTGAGGAGGATGAAGGGGGGAGATATAAGGATGAGTAAGGGGAGGTTGT
GGATGTGGGTTGGTGGTGTTGTTGTTGTGCTGAGTGTGATTGTAGTGATG
GTGATGGGCATGAGGATGAGGATGGGGATGCGTGAGTGGTTTTGTGGGCT
AGAAGACGCGTGGATGGAGAGTGGTGATAGGTCGAGTTGGAGGATGTTGC
TGTGA
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0016491oxidoreductase activity
Vocabulary: Biological Process
TermDefinition
GO:0055114oxidation-reduction process
GO:0016117carotenoid biosynthetic process
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_004619KJC3_004619Aspergillus niger KJC3gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_004619-T1.exon1KJC3_004619-T1.exon1Aspergillus niger KJC3exon
KJC3_004619-T1.exon2KJC3_004619-T1.exon2Aspergillus niger KJC3exon
KJC3_004619-T1.exon3KJC3_004619-T1.exon3Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_004619-T1.cdsKJC3_004619-T1.cdsAspergillus niger KJC3CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_004619-T1KJC3_004619-T1-proteinAspergillus niger KJC3polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR008150
DBxrefInterPro:IPR036188
DBxrefInterPro:IPR002937
DBxrefInterPro:IPR014105
DBxrefPFAM:PF13450
DBxrefPFAM:PF01593
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch4supercontigch4:236719..238760 +
Powered by Drupal