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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch4:250867..252797- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_004624-T1 ID=KJC3_004624-T1|Name=KJC3_004624-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1931bp|location=Sequence derived from alignment at ch4:250867..252797- (Aspergillus niger KJC3)
ACTCGGTACTGGAACTTGCGTGGAGGACCTCAAGCCCTCTAAGTCCATTT
AATGTTTTCTCATAGCCGGCTCTTCCATCGTTATTTACCTCGCATAAAAC
CTGTCTCGCTCAAAATTGCAGTCCAATTTGCACATCGGCCCCATGCCTTC
TGCTAGCCCGACACTGTCATTATCCGATCACGATGATGAGAGCCAGGAAG
ATTCTGTACCTCTAATCGTCATGAACGAGGCACAGGAAGAGCTGCAAGAT
ACCAGTCCGCCGGCAGATATCTTCGAAGTACTTGTTCTGGCTAGTGGATT
TGGGACGTGAGTTCTTCACTTGGTGGACAATTGCGGTTTGGGGCTAACAT
GTTATTAGACTACAGCTTGTATTTGCTCTCTTGGCCTCATATGGATCTGT
GATACAGCCCTCCACACTACTTACGTGTACCAGCTAACAGTAATACCCAG
GCACAGCTACTGTCCGTTGGGATCAGCCAAGCGGCAACGGGATTGGCCTG
GCTGGCCGGACCGCTTGCGGGGACTTTCTTTCAGCCTTTGATCGGTATAA
TGAGTGACAAATTTGGTCATCAGAAAACAATCGTCGCTACTGGCGTCATT
GGTCTCGTCGCATCGCTTTTAGGGCTCGGCTGGGCGTCAGATCTGAAAGA
GCAAAGCAGTGAAATAACCAGGGCTTTGGTGTTATTATTTATTTGCACTC
TGAACCTTGCCGTGCAGCCAGTTCAGCTCGGTCTACGGGTACTAATCATA
GAAGTCTGTCGTCCGGAACAGCAGATCATGGCGTCTGCTTGGGTTACGCG
CATGATCGGGATAGGAAATATTCTTGCGCAGCTGGCTGGATCGGTTGACA
CGACGAAGTTACGACCGTTCACGACTGGGAGCCATTTTAAGGATTTATGT
CTGCTGACGTCGATTGGGCTCATTGTTACTGCAATAGGTCTGGGCCTATT
TGTTAGGACCGTGGCGGATCCCATATCTTCATCTGTGAGACGAAAGAATC
AGCAAAGCAGGCTCATAGGGCCGTGGAAGGCCGTAAGGACTGTTTTTCCG
GGTGCAATGAGCGTTTGGAGGGTTCAGGTATTTTCTTGGATGGGGTGGTT
CCAATTTCTCTACTATGCCACTATGTGAGTGATCTCTGTTGTCGTCATAT
AAAGTGAACTAATCGTTCTAAATGATTGATTGCTGCAGGTACATCGATTC
TCTTGGTAAGATTCGAGTGACATGTGTTCGAGCGCTGGAGCTTCTGCTGA
CTCACCTAACAGCTTTACAAGATCTCCTGCAGGATGCAAAGATAACAGAC
GAGGAAGGTCAACATTCCATCAGAACGGAGTCTTTACAGTTCGGGCCCAG
AGCAATGCTTCTAAACGCTTGCGTATCGTTCGTTTCAAGCATGCTACTTC
CCTGGCTATTCAAATACAATGAGCGGTCAAAAGGAAAGTCCAGCAATCAC
CTAACGCTATCAAACATCTGGGCGATATCCCAGGCACTGTTCGGAGCAGG
CATGATACTCACTTTATGGGTATCGTCAGTTATCGGTGCAACATTCATTA
TCAGCATTCTTGGCCTCAGCTGGTGCTGCACGGCCTGGATCCCCTTTACA
TTGATGAGTACGAAAATCTTACAGGAATCGAGGAACGCCTTACGTCCCCA
CAATCCGGGTTTAATAATGAGTTTGCATAATGTGTCTATTGCAGCACCGC
AAATCCTCGCTGCTTTGATTGCAGGGTTGGTTTTTTGGGTTTCTCAGGAT
GGGGAGAACCAGGCTAGATATGTACTTGCTGTAGGTGGGTTGTTCGGACT
GGGTGCTGCGTGGATGGCAAGGGGTTTAACTATTGAAAAGGAGTTGCATT
AGTTGTTCTCAGCTGGCTTTCACAAAGCGTTGTATATAATGCCATCCTAC
TACAAGGGGCAGAGCAGATAGAAGGCCTGTG back to topCoding sequence (CDS) from alignment at ch4:250867..252797- >KJC3_004624-T1 ID=KJC3_004624-T1|Name=KJC3_004624-T1|organism=Aspergillus niger KJC3|type=CDS|length=7425bp|location=Sequence derived from alignment at ch4:250867..252797- (Aspergillus niger KJC3)
CTTTACAAGATCTCCTGCAGGATGCAAAGATAACAGACGAGGAAGGTCAA
CATTCCATCAGAACGGAGTCTTTACAGTTCGGGCCCAGAGCAATGCTTCT
AAACGCTTGCGTATCGTTCGTTTCAAGCATGCTACTTCCCTGGCTATTCA
AATACAATGAGCGGTCAAAAGGAAAGTCCAGCAATCACCTAACGCTATCA
AACATCTGGGCGATATCCCAGGCACTGTTCGGAGCAGGCATGATACTCAC
TTTATGGGTATCGTCAGTTATCGGTGCAACATTCATTATCAGCATTCTTG
GCCTCAGCTGGTGCTGCACGGCCTGGATCCCCTTTACATTGATGAGTACG
AAAATCTTACAGGAATCGAGGAACGCCTTACGTCCCCACAATCCGGGTTT
AATAATGAGTTTGCATAATGTGTCTATTGCAGCACCGCAAATCCTCGCTG
CTTTGATTGCAGGGTTGGTTTTTTGGGTTTCTCAGGATGGGGAGAACCAG
GCTAGATATGTACTTGCTGTAGGTGGGTTGTTCGGACTGGGTGCTGCGTG
GATGGCAAGGGGTTTAACTATTGAAAAGGAGTTGCATTAGGTACATCGAT
TCTCTTGGCACAGCTACTGTCCGTTGGGATCAGCCAAGCGGCAACGGGAT
TGGCCTGGCTGGCCGGACCGCTTGCGGGGACTTTCTTTCAGCCTTTGATC
GGTATAATGAGTGACAAATTTGGTCATCAGAAAACAATCGTCGCTACTGG
CGTCATTGGTCTCGTCGCATCGCTTTTAGGGCTCGGCTGGGCGTCAGATC
TGAAAGAGCAAAGCAGTGAAATAACCAGGGCTTTGGTGTTATTATTTATT
TGCACTCTGAACCTTGCCGTGCAGCCAGTTCAGCTCGGTCTACGGGTACT
AATCATAGAAGTCTGTCGTCCGGAACAGCAGATCATGGCGTCTGCTTGGG
TTACGCGCATGATCGGGATAGGAAATATTCTTGCGCAGCTGGCTGGATCG
GTTGACACGACGAAGTTACGACCGTTCACGACTGGGAGCCATTTTAAGGA
TTTATGTCTGCTGACGTCGATTGGGCTCATTGTTACTGCAATAGGTCTGG
GCCTATTTGTTAGGACCGTGGCGGATCCCATATCTTCATCTGTGAGACGA
AAGAATCAGCAAAGCAGGCTCATAGGGCCGTGGAAGGCCGTAAGGACTGT
TTTTCCGGGTGCAATGAGCGTTTGGAGGGTTCAGGTATTTTCTTGGATGG
GGTGGTTCCAATTTCTCTACTATGCCACTATACTACAGCTTGTATTTGCT
CTCTTGGCCTCATATGGATCTATGCCTTCTGCTAGCCCGACACTGTCATT
ATCCGATCACGATGATGAGAGCCAGGAAGATTCTGTACCTCTAATCGTCA
TGAACGAGGCACAGGAAGAGCTGCAAGATACCAGTCCGCCGGCAGATATC
TTCGAAGTACTTGTTCTGGCTAGTGGATTTGGGACCTTTACAAGATCTCC
TGCAGGATGCAAAGATAACAGACGAGGAAGGTCAACATTCCATCAGAACG
GAGTCTTTACAGTTCGGGCCCAGAGCAATGCTTCTAAACGCTTGCGTATC
GTTCGTTTCAAGCATGCTACTTCCCTGGCTATTCAAATACAATGAGCGGT
CAAAAGGAAAGTCCAGCAATCACCTAACGCTATCAAACATCTGGGCGATA
TCCCAGGCACTGTTCGGAGCAGGCATGATACTCACTTTATGGGTATCGTC
AGTTATCGGTGCAACATTCATTATCAGCATTCTTGGCCTCAGCTGGTGCT
GCACGGCCTGGATCCCCTTTACATTGATGAGTACGAAAATCTTACAGGAA
TCGAGGAACGCCTTACGTCCCCACAATCCGGGTTTAATAATGAGTTTGCA
TAATGTGTCTATTGCAGCACCGCAAATCCTCGCTGCTTTGATTGCAGGGT
TGGTTTTTTGGGTTTCTCAGGATGGGGAGAACCAGGCTAGATATGTACTT
GCTGTAGGTGGGTTGTTCGGACTGGGTGCTGCGTGGATGGCAAGGGGTTT
AACTATTGAAAAGGAGTTGCATTAGGTACATCGATTCTCTTGGCACAGCT
ACTGTCCGTTGGGATCAGCCAAGCGGCAACGGGATTGGCCTGGCTGGCCG
GACCGCTTGCGGGGACTTTCTTTCAGCCTTTGATCGGTATAATGAGTGAC
AAATTTGGTCATCAGAAAACAATCGTCGCTACTGGCGTCATTGGTCTCGT
CGCATCGCTTTTAGGGCTCGGCTGGGCGTCAGATCTGAAAGAGCAAAGCA
GTGAAATAACCAGGGCTTTGGTGTTATTATTTATTTGCACTCTGAACCTT
GCCGTGCAGCCAGTTCAGCTCGGTCTACGGGTACTAATCATAGAAGTCTG
TCGTCCGGAACAGCAGATCATGGCGTCTGCTTGGGTTACGCGCATGATCG
GGATAGGAAATATTCTTGCGCAGCTGGCTGGATCGGTTGACACGACGAAG
TTACGACCGTTCACGACTGGGAGCCATTTTAAGGATTTATGTCTGCTGAC
GTCGATTGGGCTCATTGTTACTGCAATAGGTCTGGGCCTATTTGTTAGGA
CCGTGGCGGATCCCATATCTTCATCTGTGAGACGAAAGAATCAGCAAAGC
AGGCTCATAGGGCCGTGGAAGGCCGTAAGGACTGTTTTTCCGGGTGCAAT
GAGCGTTTGGAGGGTTCAGGTATTTTCTTGGATGGGGTGGTTCCAATTTC
TCTACTATGCCACTATACTACAGCTTGTATTTGCTCTCTTGGCCTCATAT
GGATCTATGCCTTCTGCTAGCCCGACACTGTCATTATCCGATCACGATGA
TGAGAGCCAGGAAGATTCTGTACCTCTAATCGTCATGAACGAGGCACAGG
AAGAGCTGCAAGATACCAGTCCGCCGGCAGATATCTTCGAAGTACTTGTT
CTGGCTAGTGGATTTGGGACCTTTACAAGATCTCCTGCAGGATGCAAAGA
TAACAGACGAGGAAGGTCAACATTCCATCAGAACGGAGTCTTTACAGTTC
GGGCCCAGAGCAATGCTTCTAAACGCTTGCGTATCGTTCGTTTCAAGCAT
GCTACTTCCCTGGCTATTCAAATACAATGAGCGGTCAAAAGGAAAGTCCA
GCAATCACCTAACGCTATCAAACATCTGGGCGATATCCCAGGCACTGTTC
GGAGCAGGCATGATACTCACTTTATGGGTATCGTCAGTTATCGGTGCAAC
ATTCATTATCAGCATTCTTGGCCTCAGCTGGTGCTGCACGGCCTGGATCC
CCTTTACATTGATGAGTACGAAAATCTTACAGGAATCGAGGAACGCCTTA
CGTCCCCACAATCCGGGTTTAATAATGAGTTTGCATAATGTGTCTATTGC
AGCACCGCAAATCCTCGCTGCTTTGATTGCAGGGTTGGTTTTTTGGGTTT
CTCAGGATGGGGAGAACCAGGCTAGATATGTACTTGCTGTAGGTGGGTTG
TTCGGACTGGGTGCTGCGTGGATGGCAAGGGGTTTAACTATTGAAAAGGA
GTTGCATTAGGTACATCGATTCTCTTGGCACAGCTACTGTCCGTTGGGAT
CAGCCAAGCGGCAACGGGATTGGCCTGGCTGGCCGGACCGCTTGCGGGGA
CTTTCTTTCAGCCTTTGATCGGTATAATGAGTGACAAATTTGGTCATCAG
AAAACAATCGTCGCTACTGGCGTCATTGGTCTCGTCGCATCGCTTTTAGG
GCTCGGCTGGGCGTCAGATCTGAAAGAGCAAAGCAGTGAAATAACCAGGG
CTTTGGTGTTATTATTTATTTGCACTCTGAACCTTGCCGTGCAGCCAGTT
CAGCTCGGTCTACGGGTACTAATCATAGAAGTCTGTCGTCCGGAACAGCA
GATCATGGCGTCTGCTTGGGTTACGCGCATGATCGGGATAGGAAATATTC
TTGCGCAGCTGGCTGGATCGGTTGACACGACGAAGTTACGACCGTTCACG
ACTGGGAGCCATTTTAAGGATTTATGTCTGCTGACGTCGATTGGGCTCAT
TGTTACTGCAATAGGTCTGGGCCTATTTGTTAGGACCGTGGCGGATCCCA
TATCTTCATCTGTGAGACGAAAGAATCAGCAAAGCAGGCTCATAGGGCCG
TGGAAGGCCGTAAGGACTGTTTTTCCGGGTGCAATGAGCGTTTGGAGGGT
TCAGGTATTTTCTTGGATGGGGTGGTTCCAATTTCTCTACTATGCCACTA
TACTACAGCTTGTATTTGCTCTCTTGGCCTCATATGGATCTATGCCTTCT
GCTAGCCCGACACTGTCATTATCCGATCACGATGATGAGAGCCAGGAAGA
TTCTGTACCTCTAATCGTCATGAACGAGGCACAGGAAGAGCTGCAAGATA
CCAGTCCGCCGGCAGATATCTTCGAAGTACTTGTTCTGGCTAGTGGATTT
GGGACCTTTACAAGATCTCCTGCAGGATGCAAAGATAACAGACGAGGAAG
GTCAACATTCCATCAGAACGGAGTCTTTACAGTTCGGGCCCAGAGCAATG
CTTCTAAACGCTTGCGTATCGTTCGTTTCAAGCATGCTACTTCCCTGGCT
ATTCAAATACAATGAGCGGTCAAAAGGAAAGTCCAGCAATCACCTAACGC
TATCAAACATCTGGGCGATATCCCAGGCACTGTTCGGAGCAGGCATGATA
CTCACTTTATGGGTATCGTCAGTTATCGGTGCAACATTCATTATCAGCAT
TCTTGGCCTCAGCTGGTGCTGCACGGCCTGGATCCCCTTTACATTGATGA
GTACGAAAATCTTACAGGAATCGAGGAACGCCTTACGTCCCCACAATCCG
GGTTTAATAATGAGTTTGCATAATGTGTCTATTGCAGCACCGCAAATCCT
CGCTGCTTTGATTGCAGGGTTGGTTTTTTGGGTTTCTCAGGATGGGGAGA
ACCAGGCTAGATATGTACTTGCTGTAGGTGGGTTGTTCGGACTGGGTGCT
GCGTGGATGGCAAGGGGTTTAACTATTGAAAAGGAGTTGCATTAGGTACA
TCGATTCTCTTGGCACAGCTACTGTCCGTTGGGATCAGCCAAGCGGCAAC
GGGATTGGCCTGGCTGGCCGGACCGCTTGCGGGGACTTTCTTTCAGCCTT
TGATCGGTATAATGAGTGACAAATTTGGTCATCAGAAAACAATCGTCGCT
ACTGGCGTCATTGGTCTCGTCGCATCGCTTTTAGGGCTCGGCTGGGCGTC
AGATCTGAAAGAGCAAAGCAGTGAAATAACCAGGGCTTTGGTGTTATTAT
TTATTTGCACTCTGAACCTTGCCGTGCAGCCAGTTCAGCTCGGTCTACGG
GTACTAATCATAGAAGTCTGTCGTCCGGAACAGCAGATCATGGCGTCTGC
TTGGGTTACGCGCATGATCGGGATAGGAAATATTCTTGCGCAGCTGGCTG
GATCGGTTGACACGACGAAGTTACGACCGTTCACGACTGGGAGCCATTTT
AAGGATTTATGTCTGCTGACGTCGATTGGGCTCATTGTTACTGCAATAGG
TCTGGGCCTATTTGTTAGGACCGTGGCGGATCCCATATCTTCATCTGTGA
GACGAAAGAATCAGCAAAGCAGGCTCATAGGGCCGTGGAAGGCCGTAAGG
ACTGTTTTTCCGGGTGCAATGAGCGTTTGGAGGGTTCAGGTATTTTCTTG
GATGGGGTGGTTCCAATTTCTCTACTATGCCACTATACTACAGCTTGTAT
TTGCTCTCTTGGCCTCATATGGATCTATGCCTTCTGCTAGCCCGACACTG
TCATTATCCGATCACGATGATGAGAGCCAGGAAGATTCTGTACCTCTAAT
CGTCATGAACGAGGCACAGGAAGAGCTGCAAGATACCAGTCCGCCGGCAG
ATATCTTCGAAGTACTTGTTCTGGCTAGTGGATTTGGGACCTTTACAAGA
TCTCCTGCAGGATGCAAAGATAACAGACGAGGAAGGTCAACATTCCATCA
GAACGGAGTCTTTACAGTTCGGGCCCAGAGCAATGCTTCTAAACGCTTGC
GTATCGTTCGTTTCAAGCATGCTACTTCCCTGGCTATTCAAATACAATGA
GCGGTCAAAAGGAAAGTCCAGCAATCACCTAACGCTATCAAACATCTGGG
CGATATCCCAGGCACTGTTCGGAGCAGGCATGATACTCACTTTATGGGTA
TCGTCAGTTATCGGTGCAACATTCATTATCAGCATTCTTGGCCTCAGCTG
GTGCTGCACGGCCTGGATCCCCTTTACATTGATGAGTACGAAAATCTTAC
AGGAATCGAGGAACGCCTTACGTCCCCACAATCCGGGTTTAATAATGAGT
TTGCATAATGTGTCTATTGCAGCACCGCAAATCCTCGCTGCTTTGATTGC
AGGGTTGGTTTTTTGGGTTTCTCAGGATGGGGAGAACCAGGCTAGATATG
TACTTGCTGTAGGTGGGTTGTTCGGACTGGGTGCTGCGTGGATGGCAAGG
GGTTTAACTATTGAAAAGGAGTTGCATTAGGTACATCGATTCTCTTGGCA
CAGCTACTGTCCGTTGGGATCAGCCAAGCGGCAACGGGATTGGCCTGGCT
GGCCGGACCGCTTGCGGGGACTTTCTTTCAGCCTTTGATCGGTATAATGA
GTGACAAATTTGGTCATCAGAAAACAATCGTCGCTACTGGCGTCATTGGT
CTCGTCGCATCGCTTTTAGGGCTCGGCTGGGCGTCAGATCTGAAAGAGCA
AAGCAGTGAAATAACCAGGGCTTTGGTGTTATTATTTATTTGCACTCTGA
ACCTTGCCGTGCAGCCAGTTCAGCTCGGTCTACGGGTACTAATCATAGAA
GTCTGTCGTCCGGAACAGCAGATCATGGCGTCTGCTTGGGTTACGCGCAT
GATCGGGATAGGAAATATTCTTGCGCAGCTGGCTGGATCGGTTGACACGA
CGAAGTTACGACCGTTCACGACTGGGAGCCATTTTAAGGATTTATGTCTG
CTGACGTCGATTGGGCTCATTGTTACTGCAATAGGTCTGGGCCTATTTGT
TAGGACCGTGGCGGATCCCATATCTTCATCTGTGAGACGAAAGAATCAGC
AAAGCAGGCTCATAGGGCCGTGGAAGGCCGTAAGGACTGTTTTTCCGGGT
GCAATGAGCGTTTGGAGGGTTCAGGTATTTTCTTGGATGGGGTGGTTCCA
ATTTCTCTACTATGCCACTATACTACAGCTTGTATTTGCTCTCTTGGCCT
CATATGGATCTATGCCTTCTGCTAGCCCGACACTGTCATTATCCGATCAC
GATGATGAGAGCCAGGAAGATTCTGTACCTCTAATCGTCATGAACGAGGC
ACAGGAAGAGCTGCAAGATACCAGTCCGCCGGCAGATATCTTCGAAGTAC
TTGTTCTGGCTAGTGGATTTGGGAC back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0055085 | transmembrane transport |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0022857 | transmembrane transporter activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_004624-T1.utr3p1 | KJC3_004624-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_004624-T1.utr5p1 | KJC3_004624-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR036259 |
| DBxref | InterPro:IPR011701 |
| DBxref | PFAM:PF07690 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch4 | supercontig | ch4:250867..252797 - |
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