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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch4:293911..295310+ Legend: five_prime_UTRexonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_004641-T2 ID=KJC3_004641-T2|Name=KJC3_004641-T2|organism=Aspergillus niger KJC3|type=mRNA|length=1400bp|location=Sequence derived from alignment at ch4:293911..295310+ (Aspergillus niger KJC3)
ATGTGCAATAATGGCGACCCGGATTCCACCGGGGATCAACCAGCTATAGG
CAGAAGAGTTTTACGAGCACGCGTCTTCCCGGTCAGCCAGATTGGCAACT
AAAAGGGATGGACCCTCGCGATGACCAGTGAGGTTGCCTATCAATTGCTT
TTGGACCCTTACAGCGTGCTCGGGATGTGGAGGCACTCAGCCGAGGCCCC
TTCCTCGCTCCCATCCACCATCATCCATCGCCTCCAGTTACCAACAGGGC
CCGACTAGTCCAAGTCCAATTACTCCTCAGTCTGTCGTTAGAAGTGGTAT
CACCCCCACAAGGACAATGAAAGCCGAAGCCGGACGGCACAAAACGGGTA
TGACTGCACAACCCCGACCAGACCCCATACGCATAGACCCCGCCAACTAT
AGCAGATCCACTCACGCCGCTAGCTAGGCCTCACCCCGGTCCACTTGTTC
TCCCATGGCTCTCCGCTGATGATATACGAAACGACCGAATGCTCCAAGTA
CTGGCGCAAATGTGGCGACGAAGCACGAGCACACAATGTGAAAGGAATAG
TGATGCTGGTGCGTATACCACAAACACCCCGGATCCACCCGGTACTCTAC
ACTACCCACATTGGGGAAGGTACTTTGTACTCACGGACACTAACTCCAAA
GGATGACCAAACCAGAGCTCCCACTGGGCGACACTAGGAGACGGCATCGA
AGTGGCCACGAACCCCGCTCCCCAGATCTGCCCCATGGGTATCGTCCCGA
GCAACGACTACAAGACCTACAAAATGACTTCTGACTTGGCCACCGCACAA
CAATGCATCGACCTCCTTCAAGCAGAGGGGTTCAACGTATCTGGCAACCC
GCAGTACAACTGGATAGTAGACGTGTACACCATTATCCAAAAGATGTTCC
CAGAGGGCAACCCCCCTCCGGTAACAGTGGTATCCAGTAACGCGCGATAC
GATCCCCACTACCATCTGAAGATAGGCAAGACACTGCGCCAACTCCGAAA
GGAGAACTACCTCCTTATCGGCACAGGAGGATCAGTACATAATCTCTACC
GCAATCGGTGGGGGTCCATGGTCAAATATCGCGACTCCCTAGCCCAGGAG
ATCCCACCAGAGGAGTGGGCACTAGAGTTCAAGCAATCTCTGGAGGATGT
GATGACGAAGACATCGGGATTGCAGCTGCAGCGGGCGGTAACTAGGCTTA
TGAAGCATCCACAGTTTCGTGACGCGCATGGTACAGATGATCATTTCGTG
CCGGCAGCTTTTGTGGCGGGGGCGGCGGGGGATGCTGAGGATGAAGGCTG
TCATGGGGTCTTGGGCGCCGAGACTTGGGAGTTGAGTAATATGGCTAATC
TGCAGTTTACGTTTGGGAAGTGGCCGAAGCAGCCGCTTGTGGCTGCTTAA
back to topCoding sequence (CDS) from alignment at ch4:293911..295310+ >KJC3_004641-T2 ID=KJC3_004641-T2|Name=KJC3_004641-T2|organism=Aspergillus niger KJC3|type=CDS|length=666bp|location=Sequence derived from alignment at ch4:293911..295310+ (Aspergillus niger KJC3)
ATGGGTATCGTCCCGAGCAACGACTACAAGACCTACAAAATGACTTCTGA
CTTGGCCACCGCACAACAATGCATCGACCTCCTTCAAGCAGAGGGGTTCA
ACGTATCTGGCAACCCGCAGTACAACTGGATAGTAGACGTGTACACCATT
ATCCAAAAGATGTTCCCAGAGGGCAACCCCCCTCCGGTAACAGTGGTATC
CAGTAACGCGCGATACGATCCCCACTACCATCTGAAGATAGGCAAGACAC
TGCGCCAACTCCGAAAGGAGAACTACCTCCTTATCGGCACAGGAGGATCA
GTACATAATCTCTACCGCAATCGGTGGGGGTCCATGGTCAAATATCGCGA
CTCCCTAGCCCAGGAGATCCCACCAGAGGAGTGGGCACTAGAGTTCAAGC
AATCTCTGGAGGATGTGATGACGAAGACATCGGGATTGCAGCTGCAGCGG
GCGGTAACTAGGCTTATGAAGCATCCACAGTTTCGTGACGCGCATGGTAC
AGATGATCATTTCGTGCCGGCAGCTTTTGTGGCGGGGGCGGCGGGGGATG
CTGAGGATGAAGGCTGTCATGGGGTCTTGGGCGCCGAGACTTGGGAGTTG
AGTAATATGGCTAATCTGCAGTTTACGTTTGGGAAGTGGCCGAAGCAGCC
GCTTGTGGCTGCTTAA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0055114 | oxidation-reduction process |
| GO:0006725 | cellular aromatic compound metabolic process |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0008270 | zinc ion binding |
| GO:0016701 | oxidoreductase activity, acting on single donors with incorporation of molecular oxygen |
| GO:0008198 | ferrous iron binding |
| GO:0016491 | oxidoreductase activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR014436 |
| DBxref | InterPro:IPR004183 |
| DBxref | PFAM:PF02900 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch4 | supercontig | ch4:293911..295310 + |
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