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KJC3_004653-T1, KJC3_004653-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_004653-T1
Unique NameKJC3_004653-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch4:323773..324700-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_004653-T1 ID=KJC3_004653-T1|Name=KJC3_004653-T1|organism=Aspergillus niger KJC3|type=mRNA|length=928bp|location=Sequence derived from alignment at ch4:323773..324700- (Aspergillus niger KJC3)
ATGATGGCAATGTACTTCTTCCTTGGCCTTCTGTTAACGGCCGTTGGTAC
CAGCAGCAGCAGCAGCAGCGCATCTGATCTAGAAGGAACATGGACAACCA
AGTCCCGCCAGGTTGTGACAGGTCCGGTATGTTTTGCGCCGTGTTGATTG
TTTACCAGCCTCGATGGGCCAGCGCTACCTGTTCGCTAACCGTTCAACCT
CTGATACTCACAGGGCTTTTACGATCCTATTGGTGATAAATTCCTCGAAC
CCAATCTCACTGGTATCTCGTACTCGTTCAGCGCCGATGGACATTATGAA
GAAGCCTACTATCGTGCCATTGCCAATCGTTAGTCCCAGAATTCTTGTAA
CCATGATAGCGCTTGCATTTCCCCGGTTCTGACATGTCATGATCATTAAA
TAGCCCAGGATCCCTCCTGCCCAAAAGGGATTATGCAATGGCAGCACGGT
ACCTATACCGTAAACAGTGATGGATCGGTGGACCTGACCCCGATCGCTGT
CGATGGACGCCAGCTTTTATCAGATCCTTGTCAGTCCTCTACGGGTACCT
ATACCAGATACAACCAGACTGAGCACTTTGAGGTACTTGGCCTCTGCCCC
TTTACTATATGAGAGCTACTGACAGGTATAGTCGTTTGCTGTCTCGGTAG
ATTCATACCATGGTGTCCAACGCCTTGACGTCAAGAATTTCGACGGATCG
CCGATGCATCCAATGTATCTTATATACAAACCGCCACAGATGTTACCCAC
ACAGACGCTCAATCCAAGCTCCTCCAGCAAGAGTAAACGCCAGGTCGAGG
GAGATACTGGAGGTCGCTTTAGCATAAAGGATTTGGTCAGCAGGGAGAAA
GTTGGTGACCCGAATAACTGGCTGTGGCTTGGTATATTCATGACTACACT
AGGAGGGATCACCTTCTTTCGCTCTTAG
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Coding sequence (CDS) from alignment at ch4:323773..324700-

>KJC3_004653-T1 ID=KJC3_004653-T1|Name=KJC3_004653-T1|organism=Aspergillus niger KJC3|type=CDS|length=2868bp|location=Sequence derived from alignment at ch4:323773..324700- (Aspergillus niger KJC3)
TCGTTTGCTGTCTCGGTAGATTCATACCATGGTGTCCAACGCCTTGACGT
CAAGAATTTCGACGGATCGCCGATGCATCCAATGTATCTTATATACAAAC
CGCCACAGATGTTACCCACACAGACGCTCAATCCAAGCTCCTCCAGCAAG
AGTAAACGCCAGGTCGAGGGAGATACTGGAGGTCGCTTTAGCATAAAGGA
TTTGGTCAGCAGGGAGAAAGTTGGTGACCCGAATAACTGGCTGTGGCTTG
GTATATTCATGACTACACTAGGAGGGATCACCTTCTTTCGCTCTTAGCCC
AGGATCCCTCCTGCCCAAAAGGGATTATGCAATGGCAGCACGGTACCTAT
ACCGTAAACAGTGATGGATCGGTGGACCTGACCCCGATCGCTGTCGATGG
ACGCCAGCTTTTATCAGATCCTTGTCAGTCCTCTACGGGTACCTATACCA
GATACAACCAGACTGAGCACTTTGAGGGCTTTTACGATCCTATTGGTGAT
AAATTCCTCGAACCCAATCTCACTGGTATCTCGTACTCGTTCAGCGCCGA
TGGACATTATGAAGAAGCCTACTATCGTGCCATTGCCAATCATGATGGCA
ATGTACTTCTTCCTTGGCCTTCTGTTAACGGCCGTTGGTACCAGCAGCAG
CAGCAGCAGCGCATCTGATCTAGAAGGAACATGGACAACCAAGTCCCGCC
AGGTTGTGACAGGTCCGTCGTTTGCTGTCTCGGTAGATTCATACCATGGT
GTCCAACGCCTTGACGTCAAGAATTTCGACGGATCGCCGATGCATCCAAT
GTATCTTATATACAAACCGCCACAGATGTTACCCACACAGACGCTCAATC
CAAGCTCCTCCAGCAAGAGTAAACGCCAGGTCGAGGGAGATACTGGAGGT
CGCTTTAGCATAAAGGATTTGGTCAGCAGGGAGAAAGTTGGTGACCCGAA
TAACTGGCTGTGGCTTGGTATATTCATGACTACACTAGGAGGGATCACCT
TCTTTCGCTCTTAGCCCAGGATCCCTCCTGCCCAAAAGGGATTATGCAAT
GGCAGCACGGTACCTATACCGTAAACAGTGATGGATCGGTGGACCTGACC
CCGATCGCTGTCGATGGACGCCAGCTTTTATCAGATCCTTGTCAGTCCTC
TACGGGTACCTATACCAGATACAACCAGACTGAGCACTTTGAGGGCTTTT
ACGATCCTATTGGTGATAAATTCCTCGAACCCAATCTCACTGGTATCTCG
TACTCGTTCAGCGCCGATGGACATTATGAAGAAGCCTACTATCGTGCCAT
TGCCAATCATGATGGCAATGTACTTCTTCCTTGGCCTTCTGTTAACGGCC
GTTGGTACCAGCAGCAGCAGCAGCAGCGCATCTGATCTAGAAGGAACATG
GACAACCAAGTCCCGCCAGGTTGTGACAGGTCCGTCGTTTGCTGTCTCGG
TAGATTCATACCATGGTGTCCAACGCCTTGACGTCAAGAATTTCGACGGA
TCGCCGATGCATCCAATGTATCTTATATACAAACCGCCACAGATGTTACC
CACACAGACGCTCAATCCAAGCTCCTCCAGCAAGAGTAAACGCCAGGTCG
AGGGAGATACTGGAGGTCGCTTTAGCATAAAGGATTTGGTCAGCAGGGAG
AAAGTTGGTGACCCGAATAACTGGCTGTGGCTTGGTATATTCATGACTAC
ACTAGGAGGGATCACCTTCTTTCGCTCTTAGCCCAGGATCCCTCCTGCCC
AAAAGGGATTATGCAATGGCAGCACGGTACCTATACCGTAAACAGTGATG
GATCGGTGGACCTGACCCCGATCGCTGTCGATGGACGCCAGCTTTTATCA
GATCCTTGTCAGTCCTCTACGGGTACCTATACCAGATACAACCAGACTGA
GCACTTTGAGGGCTTTTACGATCCTATTGGTGATAAATTCCTCGAACCCA
ATCTCACTGGTATCTCGTACTCGTTCAGCGCCGATGGACATTATGAAGAA
GCCTACTATCGTGCCATTGCCAATCATGATGGCAATGTACTTCTTCCTTG
GCCTTCTGTTAACGGCCGTTGGTACCAGCAGCAGCAGCAGCAGCGCATCT
GATCTAGAAGGAACATGGACAACCAAGTCCCGCCAGGTTGTGACAGGTCC
GTCGTTTGCTGTCTCGGTAGATTCATACCATGGTGTCCAACGCCTTGACG
TCAAGAATTTCGACGGATCGCCGATGCATCCAATGTATCTTATATACAAA
CCGCCACAGATGTTACCCACACAGACGCTCAATCCAAGCTCCTCCAGCAA
GAGTAAACGCCAGGTCGAGGGAGATACTGGAGGTCGCTTTAGCATAAAGG
ATTTGGTCAGCAGGGAGAAAGTTGGTGACCCGAATAACTGGCTGTGGCTT
GGTATATTCATGACTACACTAGGAGGGATCACCTTCTTTCGCTCTTAGCC
CAGGATCCCTCCTGCCCAAAAGGGATTATGCAATGGCAGCACGGTACCTA
TACCGTAAACAGTGATGGATCGGTGGACCTGACCCCGATCGCTGTCGATG
GACGCCAGCTTTTATCAGATCCTTGTCAGTCCTCTACGGGTACCTATACC
AGATACAACCAGACTGAGCACTTTGAGGGCTTTTACGATCCTATTGGTGA
TAAATTCCTCGAACCCAATCTCACTGGTATCTCGTACTCGTTCAGCGCCG
ATGGACATTATGAAGAAGCCTACTATCGTGCCATTGCCAATCATGATGGC
AATGTACTTCTTCCTTGGCCTTCTGTTAACGGCCGTTGGTACCAGCAGCA
GCAGCAGCAGCGCATCTGATCTAGAAGGAACATGGACAACCAAGTCCCGC
CAGGTTGTGACAGGTCCG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005783endoplasmic reticulum
Vocabulary: Biological Process
TermDefinition
GO:0006458'de novo' protein folding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ROT1KJC3_004653Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_004653-T1KJC3_004653-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_004653-T1.cdsKJC3_004653-T1.cdsAspergillus niger KJC3CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_004653-T1.exon4KJC3_004653-T1.exon4Aspergillus niger KJC3exon
KJC3_004653-T1.exon3KJC3_004653-T1.exon3Aspergillus niger KJC3exon
KJC3_004653-T1.exon2KJC3_004653-T1.exon2Aspergillus niger KJC3exon
KJC3_004653-T1.exon1KJC3_004653-T1.exon1Aspergillus niger KJC3exon


Properties
Property NameValue
NoteSECRETED:SignalP(1-19)
DBxrefInterPro:IPR019623
DBxrefPFAM:PF10681
ProductReversal of tor2 lethality
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch4supercontigch4:323773..324700 -
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