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KJC3_004654-T1, KJC3_004654-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_004654-T1
Unique NameKJC3_004654-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch4:325031..325878+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_004654-T1 ID=KJC3_004654-T1|Name=KJC3_004654-T1|organism=Aspergillus niger KJC3|type=mRNA|length=848bp|location=Sequence derived from alignment at ch4:325031..325878+ (Aspergillus niger KJC3)
ATGATGGCTGGGTTGCAAGTCGCAAAGAGGGACCTCCGCCGGAGGATGCG
GGATGCTCTCCAGCAGATCCCCGCCGACTCTATTGCCAATCAATGTCAGG
GATCTCGATTCGCTTCTGCCCAATATGGTCGCGGCATGTACTGACCTCCT
ACAGCCAGAATCGCTACAAATCAGTTACTCTCTCTCCAGGAATATCGGGA
TGCGAAGAGGATCGGTGTCTATCTGTCCATGCCAGCCGGCGAACTCTCTA
CAACTGCTATAGTGCAGGATGCCCTGGCCAATGGCAAAGAAGTCTTCGTA
CCTTACATACACAATCTCGAGTTGTCGTCGCAGCCAAAGACATCAGTCAT
GGATATGTTGCTGTTAGAGTCGATGGATGAGTTCAGATCGCTCAAGCCGG
ACAAGTGGGGAATTCCATCACTTTCGCAAGCAAGTGTACTTAACAAGAGG
AACTGCTTCGGGGGCAAGGGAGTCTCACCCCAGCCGGAAGATTCTACGCA
AGGACCCTACGGGTTGGATTTGATTGTCATGCCAGGAATGGCGTTTGATG
ACGGATTCAGAAGATTAGGCCATGGCAAAGGTTACTATGATCATTTCCTG
ACAAGGTACTCCAAAGGTCCCGAGAGCACAACAACGGCACCGAAGCTGCC
TCTACTGGGTAAGGCATAGTTGTTCCAGATGACAGCAGTCAACCCGAGAA
TATTCCATCGCTAACCCCTCGTACAGTCGCGCTCGCTCTCAAAGAACAAA
TGCTTGACCCGACCGAAAAGATCCCGGTTGCGGATCACGACTGGCTAGTA
GACGTCCTCATGGTCGGCGATGACCGGTGCCTCGTGCGCCAACGCTGA
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Coding sequence (CDS) from alignment at ch4:325031..325878+

>KJC3_004654-T1 ID=KJC3_004654-T1|Name=KJC3_004654-T1|organism=Aspergillus niger KJC3|type=CDS|length=2160bp|location=Sequence derived from alignment at ch4:325031..325878+ (Aspergillus niger KJC3)
ATGATGGCTGGGTTGCAAGTCGCAAAGAGGGACCTCCGCCGGAGGATGCG
GGATGCTCTCCAGCAGATCCCCGCCGACTCTATTGCCAATCAATCCAGAA
TCGCTACAAATCAGTTACTCTCTCTCCAGGAATATCGGGATGCGAAGAGG
ATCGGTGTCTATCTGTCCATGCCAGCCGGCGAACTCTCTACAACTGCTAT
AGTGCAGGATGCCCTGGCCAATGGCAAAGAAGTCTTCGTACCTTACATAC
ACAATCTCGAGTTGTCGTCGCAGCCAAAGACATCAGTCATGGATATGTTG
CTGTTAGAGTCGATGGATGAGTTCAGATCGCTCAAGCCGGACAAGTGGGG
AATTCCATCACTTTCGCAAGCAAGTGTACTTAACAAGAGGAACTGCTTCG
GGGGCAAGGGAGTCTCACCCCAGCCGGAAGATTCTACGCAAGGACCCTAC
GGGTTGGATTTGATTGTCATGCCAGGAATGGCGTTTGATGACGGATTCAG
AAGATTAGGCCATGGCAAAGGTTACTATGATCATTTCCTGACAAGGTACT
CCAAAGGTCCCGAGAGCACAACAACGGCACCGAAGCTGCCTCTACTGGTC
GCGCTCGCTCTCAAAGAACAAATGCTTGACCCGACCGAAAAGATCCCGGT
TGCGGATCACGACTGGCTAGTAGACGTCCTCATGGTCGGCGATGACCGGT
GCCTCGTGCGCCAACGCTGAATGATGGCTGGGTTGCAAGTCGCAAAGAGG
GACCTCCGCCGGAGGATGCGGGATGCTCTCCAGCAGATCCCCGCCGACTC
TATTGCCAATCAATCCAGAATCGCTACAAATCAGTTACTCTCTCTCCAGG
AATATCGGGATGCGAAGAGGATCGGTGTCTATCTGTCCATGCCAGCCGGC
GAACTCTCTACAACTGCTATAGTGCAGGATGCCCTGGCCAATGGCAAAGA
AGTCTTCGTACCTTACATACACAATCTCGAGTTGTCGTCGCAGCCAAAGA
CATCAGTCATGGATATGTTGCTGTTAGAGTCGATGGATGAGTTCAGATCG
CTCAAGCCGGACAAGTGGGGAATTCCATCACTTTCGCAAGCAAGTGTACT
TAACAAGAGGAACTGCTTCGGGGGCAAGGGAGTCTCACCCCAGCCGGAAG
ATTCTACGCAAGGACCCTACGGGTTGGATTTGATTGTCATGCCAGGAATG
GCGTTTGATGACGGATTCAGAAGATTAGGCCATGGCAAAGGTTACTATGA
TCATTTCCTGACAAGGTACTCCAAAGGTCCCGAGAGCACAACAACGGCAC
CGAAGCTGCCTCTACTGGTCGCGCTCGCTCTCAAAGAACAAATGCTTGAC
CCGACCGAAAAGATCCCGGTTGCGGATCACGACTGGCTAGTAGACGTCCT
CATGGTCGGCGATGACCGGTGCCTCGTGCGCCAACGCTGAATGATGGCTG
GGTTGCAAGTCGCAAAGAGGGACCTCCGCCGGAGGATGCGGGATGCTCTC
CAGCAGATCCCCGCCGACTCTATTGCCAATCAATCCAGAATCGCTACAAA
TCAGTTACTCTCTCTCCAGGAATATCGGGATGCGAAGAGGATCGGTGTCT
ATCTGTCCATGCCAGCCGGCGAACTCTCTACAACTGCTATAGTGCAGGAT
GCCCTGGCCAATGGCAAAGAAGTCTTCGTACCTTACATACACAATCTCGA
GTTGTCGTCGCAGCCAAAGACATCAGTCATGGATATGTTGCTGTTAGAGT
CGATGGATGAGTTCAGATCGCTCAAGCCGGACAAGTGGGGAATTCCATCA
CTTTCGCAAGCAAGTGTACTTAACAAGAGGAACTGCTTCGGGGGCAAGGG
AGTCTCACCCCAGCCGGAAGATTCTACGCAAGGACCCTACGGGTTGGATT
TGATTGTCATGCCAGGAATGGCGTTTGATGACGGATTCAGAAGATTAGGC
CATGGCAAAGGTTACTATGATCATTTCCTGACAAGGTACTCCAAAGGTCC
CGAGAGCACAACAACGGCACCGAAGCTGCCTCTACTGGTCGCGCTCGCTC
TCAAAGAACAAATGCTTGACCCGACCGAAAAGATCCCGGTTGCGGATCAC
GACTGGCTAGTAGACGTCCTCATGGTCGGCGATGACCGGTGCCTCGTGCG
CCAACGCTGA
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_004654KJC3_004654Aspergillus niger KJC3gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_004654-T1.exon1KJC3_004654-T1.exon1Aspergillus niger KJC3exon
KJC3_004654-T1.exon2KJC3_004654-T1.exon2Aspergillus niger KJC3exon
KJC3_004654-T1.exon3KJC3_004654-T1.exon3Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_004654-T1.cdsKJC3_004654-T1.cdsAspergillus niger KJC3CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_004654-T1KJC3_004654-T1-proteinAspergillus niger KJC3polypeptide


Properties
Property NameValue
NoteBUSCO:EOG09264PMA
DBxrefInterPro:IPR037171
DBxrefInterPro:IPR024185
DBxrefInterPro:IPR002698
DBxrefPFAM:PF01812
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch4supercontigch4:325031..325878 +
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