|
|
Sequences
The following sequences are available for this feature:
mRNA from alignment at ch4:352429..353606- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_004665-T1 ID=KJC3_004665-T1|Name=KJC3_004665-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1178bp|location=Sequence derived from alignment at ch4:352429..353606- (Aspergillus niger KJC3)
ATGAGTTCCGTCCACATTGCAGTTGTCGGCCTTGGCCGGATGGTACACAT
CTAATTCACGAAGACTTGTGCCACAGTGCTAATATGCTTTAAGGGCAAGC
GTCATGTACATACCTTGCTTTACCGTGTTCCGCGAGCCAAGGTCGTGGCA
GTCTGCAGTACTGATGCTAGCGAGATTGAATGGGCCACAAGCAACCAGGA
GTACAACGAGTTTGGCATCACCGTCTATGACAACTACGACAATATGCTGG
CTCATCCTGGACTTCAGGCAGTTTGGATTTCGAGCAGCACTGACGTCCAT
GCAAGCCAATCTCTGGCAGCTATCGACAAGGACCTGCATGTCCTTTGCGA
AAAGCCACTGAGTACCGACTTGGCCGAGGTCTGCTACCCTTGTCAATATA
TCTGACATTATAGATGCTAATAGCTCGTCACTAGGCCCAATCAGTGGTTG
ATGCAGCGAGAGCCAAGCCTTCACTCAAAGTGATGGCCGGTTTCTCGCGC
AGGTTCGATGCCTCCTACCGGGACGCGAGCCAGAAGATCTTCGATCAAAA
GGCCATTGGATCACCGTTTTTGGTGCGGTCGAACACCTGCGATCTGAAGG
ATGAGACGGGCTTCTTTGTCCGATACGCGTCCCGCAATGGTGGTATCTTT
GTCGACTGTGCCATTCACGATATTGACTTGTCGCTCTGGTTCTTGGATAA
CCCGACGCCCAAAGCTTGCTGGGCAGCTGGAACGCTGCAGCATCACCCAG
AGCTGAAGGACCTGGCGGATGTGGACAACGCAGTCGGTGTTGTCGAGTTC
TGGGGCGGGAAGATTGCATACTTCTACTGCTCACGGACTCAGGCACATGG
ACACGATGTCTGCACCGAGATCACCGGAACCGAGGGTAAGGTAATGGTCA
ACGTTATTCCCCGACAGAACAACATTGTCCTTGCCGATAAACTGGGTATG
CGACACGAGGTGCAGCCGGAATACTGGGAGAGATTCGAGAATGCATTTGC
CGTCGAAGCCAACGAATTTGTGACTGCGGTACTGAAGGACACCGAGGTTC
CGCTGCCGCTAGAGCGAGGAATTATGGTGATGAAGATCGGACAAGCTTTG
CAACGTGCTCTGCTGTCTGGGGAAGTGGTGCGCTTTAACGAGATTGGCGA
GCGGCTGAACTGCAATGATTCACATTAG back to topCoding sequence (CDS) from alignment at ch4:352429..353606- >KJC3_004665-T1 ID=KJC3_004665-T1|Name=KJC3_004665-T1|organism=Aspergillus niger KJC3|type=CDS|length=3213bp|location=Sequence derived from alignment at ch4:352429..353606- (Aspergillus niger KJC3)
GCCCAATCAGTGGTTGATGCAGCGAGAGCCAAGCCTTCACTCAAAGTGAT
GGCCGGTTTCTCGCGCAGGTTCGATGCCTCCTACCGGGACGCGAGCCAGA
AGATCTTCGATCAAAAGGCCATTGGATCACCGTTTTTGGTGCGGTCGAAC
ACCTGCGATCTGAAGGATGAGACGGGCTTCTTTGTCCGATACGCGTCCCG
CAATGGTGGTATCTTTGTCGACTGTGCCATTCACGATATTGACTTGTCGC
TCTGGTTCTTGGATAACCCGACGCCCAAAGCTTGCTGGGCAGCTGGAACG
CTGCAGCATCACCCAGAGCTGAAGGACCTGGCGGATGTGGACAACGCAGT
CGGTGTTGTCGAGTTCTGGGGCGGGAAGATTGCATACTTCTACTGCTCAC
GGACTCAGGCACATGGACACGATGTCTGCACCGAGATCACCGGAACCGAG
GGTAAGGTAATGGTCAACGTTATTCCCCGACAGAACAACATTGTCCTTGC
CGATAAACTGGGTATGCGACACGAGGTGCAGCCGGAATACTGGGAGAGAT
TCGAGAATGCATTTGCCGTCGAAGCCAACGAATTTGTGACTGCGGTACTG
AAGGACACCGAGGTTCCGCTGCCGCTAGAGCGAGGAATTATGGTGATGAA
GATCGGACAAGCTTTGCAACGTGCTCTGCTGTCTGGGGAAGTGGTGCGCT
TTAACGAGATTGGCGAGCGGCTGAACTGCAATGATTCACATTAGGGCAAG
CGTCATGTACATACCTTGCTTTACCGTGTTCCGCGAGCCAAGGTCGTGGC
AGTCTGCAGTACTGATGCTAGCGAGATTGAATGGGCCACAAGCAACCAGG
AGTACAACGAGTTTGGCATCACCGTCTATGACAACTACGACAATATGCTG
GCTCATCCTGGACTTCAGGCAGTTTGGATTTCGAGCAGCACTGACGTCCA
TGCAAGCCAATCTCTGGCAGCTATCGACAAGGACCTGCATGTCCTTTGCG
AAAAGCCACTGAGTACCGACTTGGCCGAGATGAGTTCCGTCCACATTGCA
GTTGTCGGCCTTGGCCGGATGGCCCAATCAGTGGTTGATGCAGCGAGAGC
CAAGCCTTCACTCAAAGTGATGGCCGGTTTCTCGCGCAGGTTCGATGCCT
CCTACCGGGACGCGAGCCAGAAGATCTTCGATCAAAAGGCCATTGGATCA
CCGTTTTTGGTGCGGTCGAACACCTGCGATCTGAAGGATGAGACGGGCTT
CTTTGTCCGATACGCGTCCCGCAATGGTGGTATCTTTGTCGACTGTGCCA
TTCACGATATTGACTTGTCGCTCTGGTTCTTGGATAACCCGACGCCCAAA
GCTTGCTGGGCAGCTGGAACGCTGCAGCATCACCCAGAGCTGAAGGACCT
GGCGGATGTGGACAACGCAGTCGGTGTTGTCGAGTTCTGGGGCGGGAAGA
TTGCATACTTCTACTGCTCACGGACTCAGGCACATGGACACGATGTCTGC
ACCGAGATCACCGGAACCGAGGGTAAGGTAATGGTCAACGTTATTCCCCG
ACAGAACAACATTGTCCTTGCCGATAAACTGGGTATGCGACACGAGGTGC
AGCCGGAATACTGGGAGAGATTCGAGAATGCATTTGCCGTCGAAGCCAAC
GAATTTGTGACTGCGGTACTGAAGGACACCGAGGTTCCGCTGCCGCTAGA
GCGAGGAATTATGGTGATGAAGATCGGACAAGCTTTGCAACGTGCTCTGC
TGTCTGGGGAAGTGGTGCGCTTTAACGAGATTGGCGAGCGGCTGAACTGC
AATGATTCACATTAGGGCAAGCGTCATGTACATACCTTGCTTTACCGTGT
TCCGCGAGCCAAGGTCGTGGCAGTCTGCAGTACTGATGCTAGCGAGATTG
AATGGGCCACAAGCAACCAGGAGTACAACGAGTTTGGCATCACCGTCTAT
GACAACTACGACAATATGCTGGCTCATCCTGGACTTCAGGCAGTTTGGAT
TTCGAGCAGCACTGACGTCCATGCAAGCCAATCTCTGGCAGCTATCGACA
AGGACCTGCATGTCCTTTGCGAAAAGCCACTGAGTACCGACTTGGCCGAG
ATGAGTTCCGTCCACATTGCAGTTGTCGGCCTTGGCCGGATGGCCCAATC
AGTGGTTGATGCAGCGAGAGCCAAGCCTTCACTCAAAGTGATGGCCGGTT
TCTCGCGCAGGTTCGATGCCTCCTACCGGGACGCGAGCCAGAAGATCTTC
GATCAAAAGGCCATTGGATCACCGTTTTTGGTGCGGTCGAACACCTGCGA
TCTGAAGGATGAGACGGGCTTCTTTGTCCGATACGCGTCCCGCAATGGTG
GTATCTTTGTCGACTGTGCCATTCACGATATTGACTTGTCGCTCTGGTTC
TTGGATAACCCGACGCCCAAAGCTTGCTGGGCAGCTGGAACGCTGCAGCA
TCACCCAGAGCTGAAGGACCTGGCGGATGTGGACAACGCAGTCGGTGTTG
TCGAGTTCTGGGGCGGGAAGATTGCATACTTCTACTGCTCACGGACTCAG
GCACATGGACACGATGTCTGCACCGAGATCACCGGAACCGAGGGTAAGGT
AATGGTCAACGTTATTCCCCGACAGAACAACATTGTCCTTGCCGATAAAC
TGGGTATGCGACACGAGGTGCAGCCGGAATACTGGGAGAGATTCGAGAAT
GCATTTGCCGTCGAAGCCAACGAATTTGTGACTGCGGTACTGAAGGACAC
CGAGGTTCCGCTGCCGCTAGAGCGAGGAATTATGGTGATGAAGATCGGAC
AAGCTTTGCAACGTGCTCTGCTGTCTGGGGAAGTGGTGCGCTTTAACGAG
ATTGGCGAGCGGCTGAACTGCAATGATTCACATTAGGGCAAGCGTCATGT
ACATACCTTGCTTTACCGTGTTCCGCGAGCCAAGGTCGTGGCAGTCTGCA
GTACTGATGCTAGCGAGATTGAATGGGCCACAAGCAACCAGGAGTACAAC
GAGTTTGGCATCACCGTCTATGACAACTACGACAATATGCTGGCTCATCC
TGGACTTCAGGCAGTTTGGATTTCGAGCAGCACTGACGTCCATGCAAGCC
AATCTCTGGCAGCTATCGACAAGGACCTGCATGTCCTTTGCGAAAAGCCA
CTGAGTACCGACTTGGCCGAGATGAGTTCCGTCCACATTGCAGTTGTCGG
CCTTGGCCGGATG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0016491 | oxidoreductase activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR036291 |
| DBxref | InterPro:IPR000683 |
| DBxref | PFAM:PF01408 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch4 | supercontig | ch4:352429..353606 - |
|
