You are here

Home

KJC3_004671-T1, KJC3_004671-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_004671-T1
Unique NameKJC3_004671-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch4:363674..365304+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_004671-T1 ID=KJC3_004671-T1|Name=KJC3_004671-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1631bp|location=Sequence derived from alignment at ch4:363674..365304+ (Aspergillus niger KJC3)
ATGATCATGAATCTCACAACCCGCTTATCAGATGCCCGACAATGGCTTGA
CAAAAATTTGACATATGATCAAGACCAAGATGCGAACACATTCGAGACCA
CGATACGTATGCTCGGAGGACTGCTGTCCGCTCATTACCTATCCACTCAG
CTCCCAGACGCTTCCTCCGAGCGGGACCATGTTTACTTGTCCAAAGCAGT
AGACCTAGCAGACCGACTGCTTGCAGCATATGATTCAGGTTCAGGGATCC
CTTATGCTAGCGTCAACCTAGCAAAACGTGAAGGTATCCGGTCTCATGCT
GATGGCGGCGCTTCATCTACGGCTGAAGCAGCCACAGTGCAGTTGGAGAT
GAAGTATCTATCCGTTACCACAGGTAATGATATTTATTGGCGTAAAGCTG
AAAGGGTGATGGAAGTGTTGGATAGCAACGGCGCGAAAGATGGTCTTGTC
CCCATATATGTGCACCCGGACACTGGGAGGTTTCGGCATAAAACCATCCG
TCTCGGAAGTCGTGGTGATTCGTACTATGGTGTGTCTGTATGGTCATTTC
GCATGCTAGATTTTGGCTCACATAGCTACAGAATACTTGATGAAGCAATA
CCTGCAGACCAACGAATCAATCTACGGGGAGATGTGGGAAGAGGCGCTGA
CTGGGATTCAGAAGAATCTTATTACCTCCACCAAGTACTCAAACCTCCAA
TACATTGCTGAACTTCCAGGCGGCGTTGGCAGCCACCTTTCCCCAAAGAT
GGACCATCTTGTTTGCTTCCTACCAGGATCCATTGCCATTGGGGCTACGG
AAGGACTGACGGAAGCGGAGGCCCGCAGAACGGGACGCTGGAACGCTCAA
AAGGAGGAGCAGATGCATCTGGCAAGGGAGCTGACAAAGACATGCTGGGC
ACAGTACTCAGTAACGGAGACTGGGCTGGCTCCGGAAATTGTGTGGTTTG
AGACAGAAGATGCCAACCTTGAACCATCTACCAAGGCGCCACGAGCCTCA
AGCAGAGATGACTTAAAGTCCTGGATCAAGGACATTAACATCCGGCTGAT
AGATGCCGATAACTTGCAGCGTCCGGAGACTGTGGAAAGCCTCTTCCTAA
TGTACCGTGTCACGAAAGATCCGATATATCGACAATGGGGATGGGAGATT
TTCAAGGCATTTCATAAGCACACGCGAGTTCAAGATGGGGAAGGATACAC
ATCTCTATGTGATGTCACCATAGTTCCACCGAAACGACGGGATAATATGG
AAAGCTTCTGGCTGGTATGCTAAGTATTATCACAGGCATGCGTTGTAGAA
GCTGACATCTACCAGGCCGAAACCTTGAAATACCTCTATCTCCTCTTCTC
ACCAAATGACTTTCTTCCATTGACCGATGTGGTGTTCAACACCGAGGCCC
ATGTATTTCCACGTCTACACCAAGCAAGGTACAAGACTGGCTGGAAAAGA
AGACGGAGGATGTGAGAATCGCAGGTCACTATTTACTTATCGCTAATGCA
GCTAGTGGAAGCTGCTTCAAAACAGGAATTTTGTCTTCCGCCTCGAAGTC
ATCGTATCCACAGATATTCTAGTTGCTTCAGACTTGCTGTGGGATCCAGA
ACGTGTTTATGGTCGGGAAAATCCAGAATAG
back to top

Coding sequence (CDS) from alignment at ch4:363674..365304+

>KJC3_004671-T1 ID=KJC3_004671-T1|Name=KJC3_004671-T1|organism=Aspergillus niger KJC3|type=CDS|length=5700bp|location=Sequence derived from alignment at ch4:363674..365304+ (Aspergillus niger KJC3)
ATGATCATGAATCTCACAACCCGCTTATCAGATGCCCGACAATGGCTTGA
CAAAAATTTGACATATGATCAAGACCAAGATGCGAACACATTCGAGACCA
CGATACGTATGCTCGGAGGACTGCTGTCCGCTCATTACCTATCCACTCAG
CTCCCAGACGCTTCCTCCGAGCGGGACCATGTTTACTTGTCCAAAGCAGT
AGACCTAGCAGACCGACTGCTTGCAGCATATGATTCAGGTTCAGGGATCC
CTTATGCTAGCGTCAACCTAGCAAAACGTGAAGGTATCCGGTCTCATGCT
GATGGCGGCGCTTCATCTACGGCTGAAGCAGCCACAGTGCAGTTGGAGAT
GAAGTATCTATCCGTTACCACAGGTAATGATATTTATTGGCGTAAAGCTG
AAAGGGTGATGGAAGTGTTGGATAGCAACGGCGCGAAAGATGGTCTTGTC
CCCATATATGTGCACCCGGACACTGGGAGGTTTCGGCATAAAACCATCCG
TCTCGGAAGTCGTGGTGATTCGTACTATGAATACTTGATGAAGCAATACC
TGCAGACCAACGAATCAATCTACGGGGAGATGTGGGAAGAGGCGCTGACT
GGGATTCAGAAGAATCTTATTACCTCCACCAAGTACTCAAACCTCCAATA
CATTGCTGAACTTCCAGGCGGCGTTGGCAGCCACCTTTCCCCAAAGATGG
ACCATCTTGTTTGCTTCCTACCAGGATCCATTGCCATTGGGGCTACGGAA
GGACTGACGGAAGCGGAGGCCCGCAGAACGGGACGCTGGAACGCTCAAAA
GGAGGAGCAGATGCATCTGGCAAGGGAGCTGACAAAGACATGCTGGGCAC
AGTACTCAGTAACGGAGACTGGGCTGGCTCCGGAAATTGTGTGGTTTGAG
ACAGAAGATGCCAACCTTGAACCATCTACCAAGGCGCCACGAGCCTCAAG
CAGAGATGACTTAAAGTCCTGGATCAAGGACATTAACATCCGGCTGATAG
ATGCCGATAACTTGCAGCGTCCGGAGACTGTGGAAAGCCTCTTCCTAATG
TACCGTGTCACGAAAGATCCGATATATCGACAATGGGGATGGGAGATTTT
CAAGGCATTTCATAAGCACACGCGAGTTCAAGATGGGGAAGGATACACAT
CTCTATGTGATGTCACCATAGTTCCACCGAAACGACGGGATAATATGGAA
AGCTTCTGGCTGGCCGAAACCTTGAAATACCTCTATCTCCTCTTCTCACC
AAATGACTTTCTTCCATTGACCGATGTGGTGTTCAACACCGAGGCCCATT
GGAAGCTGCTTCAAAACAGGAATTTTGTCTTCCGCCTCGAAGTCATCGTA
TCCACAGATATTCTAGTTGCTTCAGACTTGCTGTGGGATCCAGAACGTGT
TTATGGTCGGGAAAATCCAGAATAGATGATCATGAATCTCACAACCCGCT
TATCAGATGCCCGACAATGGCTTGACAAAAATTTGACATATGATCAAGAC
CAAGATGCGAACACATTCGAGACCACGATACGTATGCTCGGAGGACTGCT
GTCCGCTCATTACCTATCCACTCAGCTCCCAGACGCTTCCTCCGAGCGGG
ACCATGTTTACTTGTCCAAAGCAGTAGACCTAGCAGACCGACTGCTTGCA
GCATATGATTCAGGTTCAGGGATCCCTTATGCTAGCGTCAACCTAGCAAA
ACGTGAAGGTATCCGGTCTCATGCTGATGGCGGCGCTTCATCTACGGCTG
AAGCAGCCACAGTGCAGTTGGAGATGAAGTATCTATCCGTTACCACAGGT
AATGATATTTATTGGCGTAAAGCTGAAAGGGTGATGGAAGTGTTGGATAG
CAACGGCGCGAAAGATGGTCTTGTCCCCATATATGTGCACCCGGACACTG
GGAGGTTTCGGCATAAAACCATCCGTCTCGGAAGTCGTGGTGATTCGTAC
TATGAATACTTGATGAAGCAATACCTGCAGACCAACGAATCAATCTACGG
GGAGATGTGGGAAGAGGCGCTGACTGGGATTCAGAAGAATCTTATTACCT
CCACCAAGTACTCAAACCTCCAATACATTGCTGAACTTCCAGGCGGCGTT
GGCAGCCACCTTTCCCCAAAGATGGACCATCTTGTTTGCTTCCTACCAGG
ATCCATTGCCATTGGGGCTACGGAAGGACTGACGGAAGCGGAGGCCCGCA
GAACGGGACGCTGGAACGCTCAAAAGGAGGAGCAGATGCATCTGGCAAGG
GAGCTGACAAAGACATGCTGGGCACAGTACTCAGTAACGGAGACTGGGCT
GGCTCCGGAAATTGTGTGGTTTGAGACAGAAGATGCCAACCTTGAACCAT
CTACCAAGGCGCCACGAGCCTCAAGCAGAGATGACTTAAAGTCCTGGATC
AAGGACATTAACATCCGGCTGATAGATGCCGATAACTTGCAGCGTCCGGA
GACTGTGGAAAGCCTCTTCCTAATGTACCGTGTCACGAAAGATCCGATAT
ATCGACAATGGGGATGGGAGATTTTCAAGGCATTTCATAAGCACACGCGA
GTTCAAGATGGGGAAGGATACACATCTCTATGTGATGTCACCATAGTTCC
ACCGAAACGACGGGATAATATGGAAAGCTTCTGGCTGGCCGAAACCTTGA
AATACCTCTATCTCCTCTTCTCACCAAATGACTTTCTTCCATTGACCGAT
GTGGTGTTCAACACCGAGGCCCATTGGAAGCTGCTTCAAAACAGGAATTT
TGTCTTCCGCCTCGAAGTCATCGTATCCACAGATATTCTAGTTGCTTCAG
ACTTGCTGTGGGATCCAGAACGTGTTTATGGTCGGGAAAATCCAGAATAG
ATGATCATGAATCTCACAACCCGCTTATCAGATGCCCGACAATGGCTTGA
CAAAAATTTGACATATGATCAAGACCAAGATGCGAACACATTCGAGACCA
CGATACGTATGCTCGGAGGACTGCTGTCCGCTCATTACCTATCCACTCAG
CTCCCAGACGCTTCCTCCGAGCGGGACCATGTTTACTTGTCCAAAGCAGT
AGACCTAGCAGACCGACTGCTTGCAGCATATGATTCAGGTTCAGGGATCC
CTTATGCTAGCGTCAACCTAGCAAAACGTGAAGGTATCCGGTCTCATGCT
GATGGCGGCGCTTCATCTACGGCTGAAGCAGCCACAGTGCAGTTGGAGAT
GAAGTATCTATCCGTTACCACAGGTAATGATATTTATTGGCGTAAAGCTG
AAAGGGTGATGGAAGTGTTGGATAGCAACGGCGCGAAAGATGGTCTTGTC
CCCATATATGTGCACCCGGACACTGGGAGGTTTCGGCATAAAACCATCCG
TCTCGGAAGTCGTGGTGATTCGTACTATGAATACTTGATGAAGCAATACC
TGCAGACCAACGAATCAATCTACGGGGAGATGTGGGAAGAGGCGCTGACT
GGGATTCAGAAGAATCTTATTACCTCCACCAAGTACTCAAACCTCCAATA
CATTGCTGAACTTCCAGGCGGCGTTGGCAGCCACCTTTCCCCAAAGATGG
ACCATCTTGTTTGCTTCCTACCAGGATCCATTGCCATTGGGGCTACGGAA
GGACTGACGGAAGCGGAGGCCCGCAGAACGGGACGCTGGAACGCTCAAAA
GGAGGAGCAGATGCATCTGGCAAGGGAGCTGACAAAGACATGCTGGGCAC
AGTACTCAGTAACGGAGACTGGGCTGGCTCCGGAAATTGTGTGGTTTGAG
ACAGAAGATGCCAACCTTGAACCATCTACCAAGGCGCCACGAGCCTCAAG
CAGAGATGACTTAAAGTCCTGGATCAAGGACATTAACATCCGGCTGATAG
ATGCCGATAACTTGCAGCGTCCGGAGACTGTGGAAAGCCTCTTCCTAATG
TACCGTGTCACGAAAGATCCGATATATCGACAATGGGGATGGGAGATTTT
CAAGGCATTTCATAAGCACACGCGAGTTCAAGATGGGGAAGGATACACAT
CTCTATGTGATGTCACCATAGTTCCACCGAAACGACGGGATAATATGGAA
AGCTTCTGGCTGGCCGAAACCTTGAAATACCTCTATCTCCTCTTCTCACC
AAATGACTTTCTTCCATTGACCGATGTGGTGTTCAACACCGAGGCCCATT
GGAAGCTGCTTCAAAACAGGAATTTTGTCTTCCGCCTCGAAGTCATCGTA
TCCACAGATATTCTAGTTGCTTCAGACTTGCTGTGGGATCCAGAACGTGT
TTATGGTCGGGAAAATCCAGAATAGATGATCATGAATCTCACAACCCGCT
TATCAGATGCCCGACAATGGCTTGACAAAAATTTGACATATGATCAAGAC
CAAGATGCGAACACATTCGAGACCACGATACGTATGCTCGGAGGACTGCT
GTCCGCTCATTACCTATCCACTCAGCTCCCAGACGCTTCCTCCGAGCGGG
ACCATGTTTACTTGTCCAAAGCAGTAGACCTAGCAGACCGACTGCTTGCA
GCATATGATTCAGGTTCAGGGATCCCTTATGCTAGCGTCAACCTAGCAAA
ACGTGAAGGTATCCGGTCTCATGCTGATGGCGGCGCTTCATCTACGGCTG
AAGCAGCCACAGTGCAGTTGGAGATGAAGTATCTATCCGTTACCACAGGT
AATGATATTTATTGGCGTAAAGCTGAAAGGGTGATGGAAGTGTTGGATAG
CAACGGCGCGAAAGATGGTCTTGTCCCCATATATGTGCACCCGGACACTG
GGAGGTTTCGGCATAAAACCATCCGTCTCGGAAGTCGTGGTGATTCGTAC
TATGAATACTTGATGAAGCAATACCTGCAGACCAACGAATCAATCTACGG
GGAGATGTGGGAAGAGGCGCTGACTGGGATTCAGAAGAATCTTATTACCT
CCACCAAGTACTCAAACCTCCAATACATTGCTGAACTTCCAGGCGGCGTT
GGCAGCCACCTTTCCCCAAAGATGGACCATCTTGTTTGCTTCCTACCAGG
ATCCATTGCCATTGGGGCTACGGAAGGACTGACGGAAGCGGAGGCCCGCA
GAACGGGACGCTGGAACGCTCAAAAGGAGGAGCAGATGCATCTGGCAAGG
GAGCTGACAAAGACATGCTGGGCACAGTACTCAGTAACGGAGACTGGGCT
GGCTCCGGAAATTGTGTGGTTTGAGACAGAAGATGCCAACCTTGAACCAT
CTACCAAGGCGCCACGAGCCTCAAGCAGAGATGACTTAAAGTCCTGGATC
AAGGACATTAACATCCGGCTGATAGATGCCGATAACTTGCAGCGTCCGGA
GACTGTGGAAAGCCTCTTCCTAATGTACCGTGTCACGAAAGATCCGATAT
ATCGACAATGGGGATGGGAGATTTTCAAGGCATTTCATAAGCACACGCGA
GTTCAAGATGGGGAAGGATACACATCTCTATGTGATGTCACCATAGTTCC
ACCGAAACGACGGGATAATATGGAAAGCTTCTGGCTGGCCGAAACCTTGA
AATACCTCTATCTCCTCTTCTCACCAAATGACTTTCTTCCATTGACCGAT
GTGGTGTTCAACACCGAGGCCCATTGGAAGCTGCTTCAAAACAGGAATTT
TGTCTTCCGCCTCGAAGTCATCGTATCCACAGATATTCTAGTTGCTTCAG
ACTTGCTGTGGGATCCAGAACGTGTTTATGGTCGGGAAAATCCAGAATAG
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Vocabulary: Molecular Function
TermDefinition
GO:0003824catalytic activity
GO:0004571mannosyl-oligosaccharide 1,2-alpha-mannosidase activity
GO:0005509calcium ion binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_004671KJC3_004671Aspergillus niger KJC3gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_004671-T1.exon1KJC3_004671-T1.exon1Aspergillus niger KJC3exon
KJC3_004671-T1.exon2KJC3_004671-T1.exon2Aspergillus niger KJC3exon
KJC3_004671-T1.exon3KJC3_004671-T1.exon3Aspergillus niger KJC3exon
KJC3_004671-T1.exon4KJC3_004671-T1.exon4Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_004671-T1.cdsKJC3_004671-T1.cdsAspergillus niger KJC3CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_004671-T1KJC3_004671-T1-proteinAspergillus niger KJC3polypeptide


Properties
Property NameValue
NoteCAZy:GH47
DBxrefInterPro:IPR036026
DBxrefInterPro:IPR012341
DBxrefInterPro:IPR001382
DBxrefPFAM:PF01532
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch4supercontigch4:363674..365304 +
Powered by Drupal