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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch4:395308..397930- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_004682-T1 ID=KJC3_004682-T1|Name=KJC3_004682-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2623bp|location=Sequence derived from alignment at ch4:395308..397930- (Aspergillus niger KJC3)
AGCTTATATCAGTTCGATCACTTCCCCCCCGCGTCCTCCCACGAACTGGA
TGAGTTCTACTCCGGTCTCATCGGGTTCGTCAGCGAAAGACCCATCGGCC
ACCGGCTATCAGGGGGGAATGCAAGAGATGGATTTCGGCGGAACCCGATC
TGGGGACTGATAAGCGGCCGGGGACGTTACATGAGGGCACCGTGTCAGCC
GTCCGTTCTTATCGGAGGGCCCACAGTAGAAGCCTGAACGAGTGCAGCGT
AATCGCCAGACGAACCAGTCATCGCTAGCGCTGCCCCGGTCTGCAGCAGG
TTGCAGCTCGCTTGGAAATTAGCTCGCGTGTCTGCCACGCCGTCGCGAGA
GATAACCGCTGCCTACCATTATTCGATTGATTCATCCATCATCTTCGCCA
CTGATAGCTGTATCATCCACGCCGGTCCGAGCTTCATTCATCCCGATTCA
TCTTCGAGCTCACGGAGGATGCTGCGTGTATATAGACACCTTGTCCGTCG
ATGTTTGGAATGGTTCTAGTCTATTCCCCAGATCCAACTAGTCATTGCTA
GGAAGCGACCCCTCACTCCACTCGGACTACTTCATCTGGGTCCGGCTTTC
ATCATCGAGATATCTTCCATCTGTCCGCAACTCATCGAGTGTCATCTATA
CTTCTACATCAACATCCTTTACACCTAAGACTGTCTCACATAATGGACGG
TCCTGACCAGATAGGCCCGGACTACCGGCCTAAGCGGACTTGGGGTGACG
TAGGTCGCCGCTTTGTCAAAACCTTCACCACAAGGTCGGTCATGGAAGCT
CGGAACACCAGTCGATGTGCTAATATTCCGTAGGGAGGGTCTCATTGGAG
ACTATGATTATGCCTATTTGTTCACTCCGAACATCCCCTTCATCACAAAG
AAACGAAGTTCTGCACCGTTCTTCGGGCTCGAAGACAAGGTACCTATTGT
ACTAGCTCTACTGCTTGGACTGCAACATGCATTGGCGATGCTGGGTGGAA
GTAAGTTCAGTCCTCTCTGAAACCTGACTAGTGCTGACCCGTCAGTTATT
TCACCTCCTATCCTGATCGGAGGCACATCTGGTGCCAACTTCGGGACAGA
AGACTACCAATACCTCGTCTCAACATCTCTCATCGCTTCCGGTATCTTGT
CCGCCATTCAGATGTTCCGCTTCCACATCTACGGAACGAAATACTACATC
GGTACCGGCTTGACTTCAGTCGTGGGAATTTCCTTCGCCACAATCACCGT
CGCTACTGGTGGCTTCGAACAAATGTACTCTAGTGGATACTGCCCGACCG
CCGAGGATGGAACCAAGCTGCCCTGCCCCAAGGGCTATGGCGCCCTGCTG
GGGACTTCGTGTTTGTGTGCGCTGCTCGAGATTGGTCTTTCCTTCATGAG
CCCTAAAATCCTGAGACGCGTCTTCCCCCCCCTCGTCACTGGTCCTACTG
TTCTCTTGATCGGAGCCAGTCTGATCGAGTCCGCTTTCCAGGACTGGGCA
GGTGGTTCGGGAACCTGCTCTGAGAATCCTGGCAACGGTGCTTTGTGCCC
TAGCGCGGACGCACCGCATGCTCTGCCTTGGGGAAGTGCGGAGTTTATCG
GTCTCGGATTTCTGGTGTATGTCTCGATCATTCTCTGTGAGCGGTTTGGA
GCGCCTATCATGCGATCATGCTCGGTCGTGGTGGGATTGTTGGTAGGATG
TATTGTGGCGGCTGCCTGCGGATACTTTGATCGATCGGGAATTGACGCTG
CGCCGGTGGCCTCCTTTATCTGGGTGAAGACTTTCCCGTTGACCATCTAC
CCGCCCATGATCCTTCCACTGCTGGCAGTGTACATTGTGGTCATGATGGA
ATCGATCGGTGACATTACCGCCACGTGCGATGTATCCCAGGTCGAAGTTG
AAGGGCCCACTTTCGACTCGCGCATTCAGGGTGGTGTGCTGGGCAACGGT
CTCACTAGTGTACTGGCCGGCCTCATGACCATGACGCCGATGTCGGTTTT
TGCCCAGAACAACGGTGTCATCGCGCTGACCAAGTGCGCCAACCGCACGG
CTGGTTACTGCTGCTGCTTCTTCCTCATCATTATGGGAATTTTTGCCAAG
TTTGCCGCTGCACTGGTTGCCATTCCCAGTAGTGTTCTTGGTGGTATGAC
CACGTTCCTTTTCTCATCGGTGGCTATCTCTGGTGTCCGCATTATCACCA
ATGTGCCATTCACGCGTCGCAACCGATTCATCCTGACCGCTTCGTTTGCA
GTCGGCATGGGAGCCACCTTGGTATCCGACTGGTTCGACTACGTCTTTAC
CTACAGCGGTAACAACCGTGGTTTGACAGGATTGCTCGACGCGATTGATC
TCGTGATGGAGAACGGGTTCGCCATTACCGCTCTAATCGGGTTAATCCTG
AATCTGATCCTTCCGGAGGACCCAGAGGAGGAAGCGGCTATCCTGGAGGC
ACGGGGTGTTTACCGACGAAGCGAGGAGGTGATGACATCGAGGGAGAGCA
CGCAGTACACCAAGGGCGAGCCCTCGAGTGTTTAATCTGTTTTCTATTCT
GTTTGATTTGATTTGGCGATACTATTATATTTGGATACCCTGGCCTAGAT
GGTCACATGAATTAATACATACA back to topCoding sequence (CDS) from alignment at ch4:395308..397930- >KJC3_004682-T1 ID=KJC3_004682-T1|Name=KJC3_004682-T1|organism=Aspergillus niger KJC3|type=CDS|length=5247bp|location=Sequence derived from alignment at ch4:395308..397930- (Aspergillus niger KJC3)
TTATTTCACCTCCTATCCTGATCGGAGGCACATCTGGTGCCAACTTCGGG
ACAGAAGACTACCAATACCTCGTCTCAACATCTCTCATCGCTTCCGGTAT
CTTGTCCGCCATTCAGATGTTCCGCTTCCACATCTACGGAACGAAATACT
ACATCGGTACCGGCTTGACTTCAGTCGTGGGAATTTCCTTCGCCACAATC
ACCGTCGCTACTGGTGGCTTCGAACAAATGTACTCTAGTGGATACTGCCC
GACCGCCGAGGATGGAACCAAGCTGCCCTGCCCCAAGGGCTATGGCGCCC
TGCTGGGGACTTCGTGTTTGTGTGCGCTGCTCGAGATTGGTCTTTCCTTC
ATGAGCCCTAAAATCCTGAGACGCGTCTTCCCCCCCCTCGTCACTGGTCC
TACTGTTCTCTTGATCGGAGCCAGTCTGATCGAGTCCGCTTTCCAGGACT
GGGCAGGTGGTTCGGGAACCTGCTCTGAGAATCCTGGCAACGGTGCTTTG
TGCCCTAGCGCGGACGCACCGCATGCTCTGCCTTGGGGAAGTGCGGAGTT
TATCGGTCTCGGATTTCTGGTGTATGTCTCGATCATTCTCTGTGAGCGGT
TTGGAGCGCCTATCATGCGATCATGCTCGGTCGTGGTGGGATTGTTGGTA
GGATGTATTGTGGCGGCTGCCTGCGGATACTTTGATCGATCGGGAATTGA
CGCTGCGCCGGTGGCCTCCTTTATCTGGGTGAAGACTTTCCCGTTGACCA
TCTACCCGCCCATGATCCTTCCACTGCTGGCAGTGTACATTGTGGTCATG
ATGGAATCGATCGGTGACATTACCGCCACGTGCGATGTATCCCAGGTCGA
AGTTGAAGGGCCCACTTTCGACTCGCGCATTCAGGGTGGTGTGCTGGGCA
ACGGTCTCACTAGTGTACTGGCCGGCCTCATGACCATGACGCCGATGTCG
GTTTTTGCCCAGAACAACGGTGTCATCGCGCTGACCAAGTGCGCCAACCG
CACGGCTGGTTACTGCTGCTGCTTCTTCCTCATCATTATGGGAATTTTTG
CCAAGTTTGCCGCTGCACTGGTTGCCATTCCCAGTAGTGTTCTTGGTGGT
ATGACCACGTTCCTTTTCTCATCGGTGGCTATCTCTGGTGTCCGCATTAT
CACCAATGTGCCATTCACGCGTCGCAACCGATTCATCCTGACCGCTTCGT
TTGCAGTCGGCATGGGAGCCACCTTGGTATCCGACTGGTTCGACTACGTC
TTTACCTACAGCGGTAACAACCGTGGTTTGACAGGATTGCTCGACGCGAT
TGATCTCGTGATGGAGAACGGGTTCGCCATTACCGCTCTAATCGGGTTAA
TCCTGAATCTGATCCTTCCGGAGGACCCAGAGGAGGAAGCGGCTATCCTG
GAGGCACGGGGTGTTTACCGACGAAGCGAGGAGGTGATGACATCGAGGGA
GAGCACGCAGTACACCAAGGGCGAGCCCTCGAGTGTTTAAGGAGGGTCTC
ATTGGAGACTATGATTATGCCTATTTGTTCACTCCGAACATCCCCTTCAT
CACAAAGAAACGAAGTTCTGCACCGTTCTTCGGGCTCGAAGACAAGGTAC
CTATTGTACTAGCTCTACTGCTTGGACTGCAACATGCATTGGCGATGCTG
GGTGGAAATGGACGGTCCTGACCAGATAGGCCCGGACTACCGGCCTAAGC
GGACTTGGGGTGACGTAGGTCGCCGCTTTGTCAAAACCTTCACCACAAGT
TATTTCACCTCCTATCCTGATCGGAGGCACATCTGGTGCCAACTTCGGGA
CAGAAGACTACCAATACCTCGTCTCAACATCTCTCATCGCTTCCGGTATC
TTGTCCGCCATTCAGATGTTCCGCTTCCACATCTACGGAACGAAATACTA
CATCGGTACCGGCTTGACTTCAGTCGTGGGAATTTCCTTCGCCACAATCA
CCGTCGCTACTGGTGGCTTCGAACAAATGTACTCTAGTGGATACTGCCCG
ACCGCCGAGGATGGAACCAAGCTGCCCTGCCCCAAGGGCTATGGCGCCCT
GCTGGGGACTTCGTGTTTGTGTGCGCTGCTCGAGATTGGTCTTTCCTTCA
TGAGCCCTAAAATCCTGAGACGCGTCTTCCCCCCCCTCGTCACTGGTCCT
ACTGTTCTCTTGATCGGAGCCAGTCTGATCGAGTCCGCTTTCCAGGACTG
GGCAGGTGGTTCGGGAACCTGCTCTGAGAATCCTGGCAACGGTGCTTTGT
GCCCTAGCGCGGACGCACCGCATGCTCTGCCTTGGGGAAGTGCGGAGTTT
ATCGGTCTCGGATTTCTGGTGTATGTCTCGATCATTCTCTGTGAGCGGTT
TGGAGCGCCTATCATGCGATCATGCTCGGTCGTGGTGGGATTGTTGGTAG
GATGTATTGTGGCGGCTGCCTGCGGATACTTTGATCGATCGGGAATTGAC
GCTGCGCCGGTGGCCTCCTTTATCTGGGTGAAGACTTTCCCGTTGACCAT
CTACCCGCCCATGATCCTTCCACTGCTGGCAGTGTACATTGTGGTCATGA
TGGAATCGATCGGTGACATTACCGCCACGTGCGATGTATCCCAGGTCGAA
GTTGAAGGGCCCACTTTCGACTCGCGCATTCAGGGTGGTGTGCTGGGCAA
CGGTCTCACTAGTGTACTGGCCGGCCTCATGACCATGACGCCGATGTCGG
TTTTTGCCCAGAACAACGGTGTCATCGCGCTGACCAAGTGCGCCAACCGC
ACGGCTGGTTACTGCTGCTGCTTCTTCCTCATCATTATGGGAATTTTTGC
CAAGTTTGCCGCTGCACTGGTTGCCATTCCCAGTAGTGTTCTTGGTGGTA
TGACCACGTTCCTTTTCTCATCGGTGGCTATCTCTGGTGTCCGCATTATC
ACCAATGTGCCATTCACGCGTCGCAACCGATTCATCCTGACCGCTTCGTT
TGCAGTCGGCATGGGAGCCACCTTGGTATCCGACTGGTTCGACTACGTCT
TTACCTACAGCGGTAACAACCGTGGTTTGACAGGATTGCTCGACGCGATT
GATCTCGTGATGGAGAACGGGTTCGCCATTACCGCTCTAATCGGGTTAAT
CCTGAATCTGATCCTTCCGGAGGACCCAGAGGAGGAAGCGGCTATCCTGG
AGGCACGGGGTGTTTACCGACGAAGCGAGGAGGTGATGACATCGAGGGAG
AGCACGCAGTACACCAAGGGCGAGCCCTCGAGTGTTTAAGGAGGGTCTCA
TTGGAGACTATGATTATGCCTATTTGTTCACTCCGAACATCCCCTTCATC
ACAAAGAAACGAAGTTCTGCACCGTTCTTCGGGCTCGAAGACAAGGTACC
TATTGTACTAGCTCTACTGCTTGGACTGCAACATGCATTGGCGATGCTGG
GTGGAAATGGACGGTCCTGACCAGATAGGCCCGGACTACCGGCCTAAGCG
GACTTGGGGTGACGTAGGTCGCCGCTTTGTCAAAACCTTCACCACAAGTT
ATTTCACCTCCTATCCTGATCGGAGGCACATCTGGTGCCAACTTCGGGAC
AGAAGACTACCAATACCTCGTCTCAACATCTCTCATCGCTTCCGGTATCT
TGTCCGCCATTCAGATGTTCCGCTTCCACATCTACGGAACGAAATACTAC
ATCGGTACCGGCTTGACTTCAGTCGTGGGAATTTCCTTCGCCACAATCAC
CGTCGCTACTGGTGGCTTCGAACAAATGTACTCTAGTGGATACTGCCCGA
CCGCCGAGGATGGAACCAAGCTGCCCTGCCCCAAGGGCTATGGCGCCCTG
CTGGGGACTTCGTGTTTGTGTGCGCTGCTCGAGATTGGTCTTTCCTTCAT
GAGCCCTAAAATCCTGAGACGCGTCTTCCCCCCCCTCGTCACTGGTCCTA
CTGTTCTCTTGATCGGAGCCAGTCTGATCGAGTCCGCTTTCCAGGACTGG
GCAGGTGGTTCGGGAACCTGCTCTGAGAATCCTGGCAACGGTGCTTTGTG
CCCTAGCGCGGACGCACCGCATGCTCTGCCTTGGGGAAGTGCGGAGTTTA
TCGGTCTCGGATTTCTGGTGTATGTCTCGATCATTCTCTGTGAGCGGTTT
GGAGCGCCTATCATGCGATCATGCTCGGTCGTGGTGGGATTGTTGGTAGG
ATGTATTGTGGCGGCTGCCTGCGGATACTTTGATCGATCGGGAATTGACG
CTGCGCCGGTGGCCTCCTTTATCTGGGTGAAGACTTTCCCGTTGACCATC
TACCCGCCCATGATCCTTCCACTGCTGGCAGTGTACATTGTGGTCATGAT
GGAATCGATCGGTGACATTACCGCCACGTGCGATGTATCCCAGGTCGAAG
TTGAAGGGCCCACTTTCGACTCGCGCATTCAGGGTGGTGTGCTGGGCAAC
GGTCTCACTAGTGTACTGGCCGGCCTCATGACCATGACGCCGATGTCGGT
TTTTGCCCAGAACAACGGTGTCATCGCGCTGACCAAGTGCGCCAACCGCA
CGGCTGGTTACTGCTGCTGCTTCTTCCTCATCATTATGGGAATTTTTGCC
AAGTTTGCCGCTGCACTGGTTGCCATTCCCAGTAGTGTTCTTGGTGGTAT
GACCACGTTCCTTTTCTCATCGGTGGCTATCTCTGGTGTCCGCATTATCA
CCAATGTGCCATTCACGCGTCGCAACCGATTCATCCTGACCGCTTCGTTT
GCAGTCGGCATGGGAGCCACCTTGGTATCCGACTGGTTCGACTACGTCTT
TACCTACAGCGGTAACAACCGTGGTTTGACAGGATTGCTCGACGCGATTG
ATCTCGTGATGGAGAACGGGTTCGCCATTACCGCTCTAATCGGGTTAATC
CTGAATCTGATCCTTCCGGAGGACCCAGAGGAGGAAGCGGCTATCCTGGA
GGCACGGGGTGTTTACCGACGAAGCGAGGAGGTGATGACATCGAGGGAGA
GCACGCAGTACACCAAGGGCGAGCCCTCGAGTGTTTAAGGAGGGTCTCAT
TGGAGACTATGATTATGCCTATTTGTTCACTCCGAACATCCCCTTCATCA
CAAAGAAACGAAGTTCTGCACCGTTCTTCGGGCTCGAAGACAAGGTACCT
ATTGTACTAGCTCTACTGCTTGGACTGCAACATGCATTGGCGATGCTGGG
TGGAAATGGACGGTCCTGACCAGATAGGCCCGGACTACCGGCCTAAGCGG
ACTTGGGGTGACGTAGGTCGCCGCTTTGTCAAAACCTTCACCACAAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0016020 | membrane |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0055085 | transmembrane transport |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0022857 | transmembrane transporter activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_004682-T1.utr3p1 | KJC3_004682-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_004682-T1.utr5p1 | KJC3_004682-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR006043 |
| DBxref | InterPro:IPR006042 |
| DBxref | PFAM:PF00860 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch4 | supercontig | ch4:395308..397930 - |
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