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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch4:430010..431092- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_004693-T1 ID=KJC3_004693-T1|Name=KJC3_004693-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1083bp|location=Sequence derived from alignment at ch4:430010..431092- (Aspergillus niger KJC3)
AAATCAGTTACGGTCAGGCTACCCATTCCCGCCCCGTGGGACCTAAACTA
AAGTATACCTGCAAGTCCAGCCCGACGTTTATGACCTATCCACCACGACC
ATCGAATGTAGTAAGTGTACATACTTTAATCCATATAAACATACCTACAT
CCTCGAACTTACTGCACGCCATGCAGAAACAATCCTTCAGCCAACTCACT
CAAACACCTACAACTCGTTATCACTAAATCTCCGAAATCAATAAACCCTG
CACCTTGCGCCAAAAAAAAAATGCCAAAAATACCAAGAACCAACACCATT
GACAAATTCACCTTCACACGCCCCGGCGACGTTGTCTACGAATTCCCCAA
ATACACCTCCGCCTCCTGCAAAGTCCGCATCACTCTGCCCCCGGGCAGCA
CCTGGACCTCAGGCCCACACTGGCACGAAAAGCGCGTCGAATACTTCCGC
GTCGTGCAAGGCGCCGCCTGGTTTACTCTCAACGGGGAATACAAAGTCTA
TCGGCCGTCCGACGGCAATGTGCCGATCCCACTATTCACGGTCCACGAAT
GGGGTCGGGCTCCCGAGCAAGAAGAGGGGGATTTAATCGTCGATGAATGG
ACCGCACCGGCCGATTCGTTCAAGATTGCGTTTTTCCGTAACTTGAATAG
TGTCATTCTGGATGAAACGAGTGACGGGAAGACACCGCCGAGGAGTGAGT
GGTGGTTAACGCTGCAGCTGTGGGTGATTTGCCATGGGCTGGATAATTGG
CCGGTTTTTTGTAGAGGGTTGTTTGGCGTGCAGTGGGTTGTCACGCATGT
GTTCTTGGCTTTGGTTGCGTTGGTAGGTTGGGCGGTCTGGGGGTTGAGGG
CCGCTTATGATGAGTATACGGCGCAGAGCATCAAGGATGTCATTAGAGCT
GCTAAGGAGGGGAAGAGGGTGAAGAGACATTGATTGATTGCATACTGCTT
TGTGTATAGTGTTTGCCACGTCAAGCTTGGACGTGGGATGAACGTTAGGC
CTCCTGCATGAATTTGATACTATCGGTTGCCAAGCTATGCAGTTCTAGTA
GTTCACATCAACTACACAGTCGGTATTAGTCAA back to topCoding sequence (CDS) from alignment at ch4:430010..431092- >KJC3_004693-T1 ID=KJC3_004693-T1|Name=KJC3_004693-T1|organism=Aspergillus niger KJC3|type=CDS|length=663bp|location=Sequence derived from alignment at ch4:430010..431092- (Aspergillus niger KJC3)
ATGCCAAAAATACCAAGAACCAACACCATTGACAAATTCACCTTCACACG
CCCCGGCGACGTTGTCTACGAATTCCCCAAATACACCTCCGCCTCCTGCA
AAGTCCGCATCACTCTGCCCCCGGGCAGCACCTGGACCTCAGGCCCACAC
TGGCACGAAAAGCGCGTCGAATACTTCCGCGTCGTGCAAGGCGCCGCCTG
GTTTACTCTCAACGGGGAATACAAAGTCTATCGGCCGTCCGACGGCAATG
TGCCGATCCCACTATTCACGGTCCACGAATGGGGTCGGGCTCCCGAGCAA
GAAGAGGGGGATTTAATCGTCGATGAATGGACCGCACCGGCCGATTCGTT
CAAGATTGCGTTTTTCCGTAACTTGAATAGTGTCATTCTGGATGAAACGA
GTGACGGGAAGACACCGCCGAGGAGTGAGTGGTGGTTAACGCTGCAGCTG
TGGGTGATTTGCCATGGGCTGGATAATTGGCCGGTTTTTTGTAGAGGGTT
GTTTGGCGTGCAGTGGGTTGTCACGCATGTGTTCTTGGCTTTGGTTGCGT
TGGTAGGTTGGGCGGTCTGGGGGTTGAGGGCCGCTTATGATGAGTATACG
GCGCAGAGCATCAAGGATGTCATTAGAGCTGCTAAGGAGGGGAAGAGGGT
GAAGAGACATTGA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_004693-T1.utr3p1 | KJC3_004693-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR011051 |
| DBxref | InterPro:IPR014710 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch4 | supercontig | ch4:430010..431092 - |
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