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KJC3_004707-T1, KJC3_004707-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_004707-T1
Unique NameKJC3_004707-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch4:468470..469480-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_004707-T1 ID=KJC3_004707-T1|Name=KJC3_004707-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1011bp|location=Sequence derived from alignment at ch4:468470..469480- (Aspergillus niger KJC3)
GCTCCCTGTAACCCCGCGGTCAAGTGAGTGAGTTGGCCTGCAGATTATCG
AATCATGGCACACAGATTCCCTCCCGTGCAAGGAGGAGGCTCCCTCATAG
TCGCCTGGCAGGCGAAAGCGAAACATGTTCTAGTTGTCGGTGGTGGAGAA
GTGAGCCTCCCCTTGCCTAGGCCGTTTAGCCTGAACTTATTACGATATAT
AATTGTTGCTTACCGAGGATTCCGCCTCAGGTGGCTGCAGGTCGCATTCT
CCACGCCCTCAATGCCGATGCCAAAGTAACCGTTGTCTGCCCTACCTCCG
GCCTCAATGATGAAGTGGCTTTTCGGGTAGCAGAGGGACAAGTTAATCAC
ATTGATAGGAACTTTGAGCCTGCCGATCTGGAAGGCGCAGATATGGTGCT
CTGTGCCATTGATGATCCGGACGCCTCGACACAGGTCTGGAAGCTCTGCA
AGGAGAAGCGGATCCCGGCAAACATAGCTGATGTGCCGTCGGAATGTGAT
TTTTACTTTGGTAGCGTCCATCGTGATGGGCCATTGCAGGTCATGGTCAG
TACCAATGGAAACGGACCCAAATTGGCCAGCATTGTCCGCAAGAAGATAG
CGGACACACTCCCCGATAATATGGGCGCAGCTATAGACAACGTGGGTAAA
TTGCGGAGGAAGCTGAGGGATATCGCCCCCAATCCTGACCAAGGCCCGAA
ACGAATGAAATGGTACGCTTGTCCTATTCTCGTCATGCGCTCGGTACGAT
GACCTCCCCCCACTGATCGATGTTATAGGATGTCTGGAGTTTGCGAGTCA
TGGAGCTTAGAGGATCTTGTTCAGATGGATGACAGTGACATGGACGGTCT
TTTGACCCATTACGCATCCGGGAAAATCCCAACCCTGAATGAAGTTCGGT
CCTCTTGACCGGAGCCGCTCAGTAGAGACCCTGTAGCACTTTAAATCTAA
ATTGGCTTCGTGAGGCCTAGGACAGCTCACTCATGTCCAAGGGCACATCC
AAGTTTACTGA
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Coding sequence (CDS) from alignment at ch4:468470..469480-

>KJC3_004707-T1 ID=KJC3_004707-T1|Name=KJC3_004707-T1|organism=Aspergillus niger KJC3|type=CDS|length=2124bp|location=Sequence derived from alignment at ch4:468470..469480- (Aspergillus niger KJC3)
GATGTCTGGAGTTTGCGAGTCATGGAGCTTAGAGGATCTTGTTCAGATGG
ATGACAGTGACATGGACGGTCTTTTGACCCATTACGCATCCGGGAAAATC
CCAACCCTGAATGAAGTTCGGTCCTCTTGAGTGGCTGCAGGTCGCATTCT
CCACGCCCTCAATGCCGATGCCAAAGTAACCGTTGTCTGCCCTACCTCCG
GCCTCAATGATGAAGTGGCTTTTCGGGTAGCAGAGGGACAAGTTAATCAC
ATTGATAGGAACTTTGAGCCTGCCGATCTGGAAGGCGCAGATATGGTGCT
CTGTGCCATTGATGATCCGGACGCCTCGACACAGGTCTGGAAGCTCTGCA
AGGAGAAGCGGATCCCGGCAAACATAGCTGATGTGCCGTCGGAATGTGAT
TTTTACTTTGGTAGCGTCCATCGTGATGGGCCATTGCAGGTCATGGTCAG
TACCAATGGAAACGGACCCAAATTGGCCAGCATTGTCCGCAAGAAGATAG
CGGACACACTCCCCGATAATATGGGCGCAGCTATAGACAACGTGGGTAAA
TTGCGGAGGAAGCTGAGGGATATCGCCCCCAATCCTGACCAAGGCCCGAA
ACGAATGAAATGATGGCACACAGATTCCCTCCCGTGCAAGGAGGAGGCTC
CCTCATAGTCGCCTGGCAGGCGAAAGCGAAACATGTTCTAGTTGTCGGTG
GTGGAGAAGATGTCTGGAGTTTGCGAGTCATGGAGCTTAGAGGATCTTGT
TCAGATGGATGACAGTGACATGGACGGTCTTTTGACCCATTACGCATCCG
GGAAAATCCCAACCCTGAATGAAGTTCGGTCCTCTTGAGTGGCTGCAGGT
CGCATTCTCCACGCCCTCAATGCCGATGCCAAAGTAACCGTTGTCTGCCC
TACCTCCGGCCTCAATGATGAAGTGGCTTTTCGGGTAGCAGAGGGACAAG
TTAATCACATTGATAGGAACTTTGAGCCTGCCGATCTGGAAGGCGCAGAT
ATGGTGCTCTGTGCCATTGATGATCCGGACGCCTCGACACAGGTCTGGAA
GCTCTGCAAGGAGAAGCGGATCCCGGCAAACATAGCTGATGTGCCGTCGG
AATGTGATTTTTACTTTGGTAGCGTCCATCGTGATGGGCCATTGCAGGTC
ATGGTCAGTACCAATGGAAACGGACCCAAATTGGCCAGCATTGTCCGCAA
GAAGATAGCGGACACACTCCCCGATAATATGGGCGCAGCTATAGACAACG
TGGGTAAATTGCGGAGGAAGCTGAGGGATATCGCCCCCAATCCTGACCAA
GGCCCGAAACGAATGAAATGATGGCACACAGATTCCCTCCCGTGCAAGGA
GGAGGCTCCCTCATAGTCGCCTGGCAGGCGAAAGCGAAACATGTTCTAGT
TGTCGGTGGTGGAGAAGATGTCTGGAGTTTGCGAGTCATGGAGCTTAGAG
GATCTTGTTCAGATGGATGACAGTGACATGGACGGTCTTTTGACCCATTA
CGCATCCGGGAAAATCCCAACCCTGAATGAAGTTCGGTCCTCTTGAGTGG
CTGCAGGTCGCATTCTCCACGCCCTCAATGCCGATGCCAAAGTAACCGTT
GTCTGCCCTACCTCCGGCCTCAATGATGAAGTGGCTTTTCGGGTAGCAGA
GGGACAAGTTAATCACATTGATAGGAACTTTGAGCCTGCCGATCTGGAAG
GCGCAGATATGGTGCTCTGTGCCATTGATGATCCGGACGCCTCGACACAG
GTCTGGAAGCTCTGCAAGGAGAAGCGGATCCCGGCAAACATAGCTGATGT
GCCGTCGGAATGTGATTTTTACTTTGGTAGCGTCCATCGTGATGGGCCAT
TGCAGGTCATGGTCAGTACCAATGGAAACGGACCCAAATTGGCCAGCATT
GTCCGCAAGAAGATAGCGGACACACTCCCCGATAATATGGGCGCAGCTAT
AGACAACGTGGGTAAATTGCGGAGGAAGCTGAGGGATATCGCCCCCAATC
CTGACCAAGGCCCGAAACGAATGAAATGATGGCACACAGATTCCCTCCCG
TGCAAGGAGGAGGCTCCCTCATAGTCGCCTGGCAGGCGAAAGCGAAACAT
GTTCTAGTTGTCGGTGGTGGAGAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0006779porphyrin-containing compound biosynthetic process
GO:0055114oxidation-reduction process
GO:0019354siroheme biosynthetic process
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_004707KJC3_004707Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_004707-T1KJC3_004707-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_004707-T1.cdsKJC3_004707-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_004707-T1.utr3p1KJC3_004707-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_004707-T1.exon3KJC3_004707-T1.exon3Aspergillus niger KJC3exon
KJC3_004707-T1.exon2KJC3_004707-T1.exon2Aspergillus niger KJC3exon
KJC3_004707-T1.exon1KJC3_004707-T1.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_004707-T1.utr5p1KJC3_004707-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR036291
DBxrefInterPro:IPR028281
DBxrefInterPro:IPR006367
DBxrefInterPro:IPR028162
DBxrefPFAM:PF14824
DBxrefPFAM:PF14823
DBxrefPFAM:PF13241
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch4supercontigch4:468470..469480 -
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