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KJC3_004718-T1, KJC3_004718-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_004718-T1
Unique NameKJC3_004718-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch4:498111..498776-

Legend: CDSpolypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_004718-T1 ID=KJC3_004718-T1|Name=KJC3_004718-T1|organism=Aspergillus niger KJC3|type=mRNA|length=666bp|location=Sequence derived from alignment at ch4:498111..498776- (Aspergillus niger KJC3)
ATGTCTCTTAAACCCATTACCCTCTACGGCCACACCATGGGCCCCAACCC
CTGGAAAGTGGCCATGGTACTCGAAGAGCTCGAAATTCCCTACAAGACGA
TATACATAGCTGCTGCAGACGTCAAGAAAGAACCATTAACCTTGGTCAAC
CCCAATGGCCGCGTGCCCGCTATCGAGGACCCCAACACAGGAATCACCCT
GTGGGAGTCAGGCGCCATTATCGAATATCTCTCCGAAACCTACGACAAAG
ACAATAAGATCAGTTTCCCAGCTGGTACCCCTGAGTACTTCCAAACAAAA
CAATGGCTCCACTTCCAGATGAGTGGGCAGGGCCCGTACTTTGGTCAGGC
TGTTTGGTTCCGGCGACACCACCCTGAAGTGGTTCCTAGTGCTCAGGAGA
GATACAAGAACGAGGTTCTTCGGGTGTCATGGGTGCTAGACAACGTTCTT
AAAGATAGGGAGTACCTAGTTGGCGGACGGTGTAGCTACGCGGACATCTC
GTTCGTGCAGTGGTTTAATGTCTTTGGAATCGCCACGGATAATGATGTTG
ACATGGAGAAGGAGTACCCAAATCTTTACTCTTGGCTCGAAAAGATCAAA
GCAAGGCCGGCTATCACCAGAACTGCCGAACTACAGAAGGAAGCAATTGC
GAATGAGAAGCACTGA
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Coding sequence (CDS) from alignment at ch4:498111..498776-

>KJC3_004718-T1 ID=KJC3_004718-T1|Name=KJC3_004718-T1|organism=Aspergillus niger KJC3|type=CDS|length=666bp|location=Sequence derived from alignment at ch4:498111..498776- (Aspergillus niger KJC3)
ATGTCTCTTAAACCCATTACCCTCTACGGCCACACCATGGGCCCCAACCC
CTGGAAAGTGGCCATGGTACTCGAAGAGCTCGAAATTCCCTACAAGACGA
TATACATAGCTGCTGCAGACGTCAAGAAAGAACCATTAACCTTGGTCAAC
CCCAATGGCCGCGTGCCCGCTATCGAGGACCCCAACACAGGAATCACCCT
GTGGGAGTCAGGCGCCATTATCGAATATCTCTCCGAAACCTACGACAAAG
ACAATAAGATCAGTTTCCCAGCTGGTACCCCTGAGTACTTCCAAACAAAA
CAATGGCTCCACTTCCAGATGAGTGGGCAGGGCCCGTACTTTGGTCAGGC
TGTTTGGTTCCGGCGACACCACCCTGAAGTGGTTCCTAGTGCTCAGGAGA
GATACAAGAACGAGGTTCTTCGGGTGTCATGGGTGCTAGACAACGTTCTT
AAAGATAGGGAGTACCTAGTTGGCGGACGGTGTAGCTACGCGGACATCTC
GTTCGTGCAGTGGTTTAATGTCTTTGGAATCGCCACGGATAATGATGTTG
ACATGGAGAAGGAGTACCCAAATCTTTACTCTTGGCTCGAAAAGATCAAA
GCAAGGCCGGCTATCACCAGAACTGCCGAACTACAGAAGGAAGCAATTGC
GAATGAGAAGCACTGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_004718KJC3_004718Aspergillus niger KJC3gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_004718-T1.cdsKJC3_004718-T1.cdsAspergillus niger KJC3CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_004718-T1.exon1KJC3_004718-T1.exon1Aspergillus niger KJC3exon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_004718-T1KJC3_004718-T1-proteinAspergillus niger KJC3polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR036282
DBxrefInterPro:IPR010987
DBxrefInterPro:IPR004045
DBxrefInterPro:IPR036249
DBxrefInterPro:IPR004046
DBxrefPFAM:PF13417
DBxrefPFAM:PF13409
DBxrefPFAM:PF02798
DBxrefPFAM:PF14497
DBxrefPFAM:PF00043
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch4supercontigch4:498111..498776 -
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