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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch4:507439..509293+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_004723-T1 ID=KJC3_004723-T1|Name=KJC3_004723-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1855bp|location=Sequence derived from alignment at ch4:507439..509293+ (Aspergillus niger KJC3)
ACACTATCCATGCACCGGGAAAATTCTTAAGCTTGGTTGGATTGTTATTG
TTAATCACAGTAATATACGGAATGTGGTACAATTTGCCACGGCTAACAAA
GGATGCGCATATCCTTGTCATCTTGGGAGAGCGTGCATAAGCTTTCGATA
GCACCTTCCGTGTTGGAATCCATCGAGCGTAATCAATACGCTTTTCCATG
AAGAGAAAAAGCAAGAAAAAAACAAAAAATGAACAAATGCAAATTCTTTC
TCCCCATCATGTCTGTGCCATCGACTAGGCCTTCCCATGCCTCAGGGGCC
ACCTCAGAGTATAAGCTCCCTTCTGGAACCCTTCTATGCTTTATGACAGC
GTGAGGCTTCAGTGAGAGGCTGTTGGCCTTCGATGCCACTTGAATATGGC
CATTACTACAATGGCGAATCCTCCTCCGGGGGAGACATACGATTTTGACT
ACTCCCATCGCCATTTGTATACGGCCAATATGGCGGTGATTTCGGCGGGC
TTAATCATCAGCACTAGCTGCTTATTCCTGCGAGTGTATACCAAGGCACA
TTTGCTGCACAAGTTCGGATGGGATGATGGTATGTTGGCTGTATCGATGA
TGAGCGTGTCTGTCTGACTGTTAAAGTGTCAATTATTCTTGCTTGGGTAG
GCTGTCACAGCGATTGGAACTGAAGCTATTCCCCGCTAATCTTGCTCCAG
GTGTTCTCTGTGAGCACCCAAGCATGCTCCATCTGTAAGTGGCTACTGCC
ATTGGCTACTACTCTACTAACATGTCAGATGAATACAAACACGGGGGCAT
GGGAGTCCACTTTTGGAATGTGACGCCTGCAGTCTATGAAGTATATATCA
AGGTTGTCCTCTCCGCAGCCATCGTCTACGTCCCGGCTCTTGCCCTTGCA
AAAATTAGCCTGATTATCCTTTACTACCGCATTTTGTGTCACAAACGGTA
CCAACAATGGATTCTATACGGCATCGCGTTCGTGGTCAGTAGCTACAGCT
TTGCGCTCGTCATGGCCTTCATTTTTGGCTGCCATCCAATTCAAAAAGGG
TGGAATATATCAGTCACGGGGACATGTGTCAACCAATACGCGCTGTATGT
TGCAACAGCCGTGTTGAACATCATCTCCGATATTGCGTTGATTCTGGTGC
CTATCCCAACGGTTTTGGGGCTGAATATGCCGGGAATACAGAAGCTAGGC
CTCTCTCTGATGTTCATGGTTGGCTGCGCGTGAGTATCGTGATCGTCATC
ATTCATGTTACCTGCTGACAATTTAGAACTCTTGTCACGGGCATCATCCG
TCTTATCACTTTGATTCCCTTTCTCAACTCCCCTGACCCAACCTACAATA
TCGGTCGACCGGACTTATGGATGTAAGTATGCCATCATCCCTGCCCTTTT
TGCTATAGTAACATAATTGCTCTAGCAACATCGAAGCAAACTTTGCCATT
ATCTGCAGCTGCCTCCCCTTCCTCCGAAATTTCCTCCGCCGCTACGCCCC
CCGCTTGATCGGTGAAAACAGCAGTCTTGCGCGTCGTTATAAGAGCTACA
CTTATGATTATACTGGGGGAAGCCGAGGCCGTCGAAAGGAGGGTCTCACG
CAGCTACAGGATGATATTGAGCTTGCTGAGAATGGAGCAAGTATGCATAG
CGGAGTTAGGATATTTAAGGATGTCAAGGTGGAGATTACCACGGAGACGA
TGCCGGATGTAAATGAAAGTAGAGATGGATATAGATGAGTGTTAATCGCG
TTATCGTTTATAGTATAAGACATATGATATTGCTCATCTAGATGAGTCAG
GAAAGTCCGATTTATGGCTTGTTTCATTGCATATTTGTCGTTCACACACA
TGACT back to topCoding sequence (CDS) from alignment at ch4:507439..509293+ >KJC3_004723-T1 ID=KJC3_004723-T1|Name=KJC3_004723-T1|organism=Aspergillus niger KJC3|type=CDS|length=6588bp|location=Sequence derived from alignment at ch4:507439..509293+ (Aspergillus niger KJC3)
ATGGCCATTACTACAATGGCGAATCCTCCTCCGGGGGAGACATACGATTT
TGACTACTCCCATCGCCATTTGTATACGGCCAATATGGCGGTGATTTCGG
CGGGCTTAATCATCAGCACTAGCTGCTTATTCCTGCGAGTGTATACCAAG
GCACATTTGCTGCACAAGTTCGGATGGGATGATGTGTCAATTATTCTTGC
TTGGGTGTTCTCTGTGAGCACCCAAGCATGCTCCATCTATGAATACAAAC
ACGGGGGCATGGGAGTCCACTTTTGGAATGTGACGCCTGCAGTCTATGAA
GTATATATCAAGGTTGTCCTCTCCGCAGCCATCGTCTACGTCCCGGCTCT
TGCCCTTGCAAAAATTAGCCTGATTATCCTTTACTACCGCATTTTGTGTC
ACAAACGGTACCAACAATGGATTCTATACGGCATCGCGTTCGTGGTCAGT
AGCTACAGCTTTGCGCTCGTCATGGCCTTCATTTTTGGCTGCCATCCAAT
TCAAAAAGGGTGGAATATATCAGTCACGGGGACATGTGTCAACCAATACG
CGCTGTATGTTGCAACAGCCGTGTTGAACATCATCTCCGATATTGCGTTG
ATTCTGGTGCCTATCCCAACGGTTTTGGGGCTGAATATGCCGGGAATACA
GAAGCTAGGCCTCTCTCTGATGTTCATGGTTGGCTGCGCAACTCTTGTCA
CGGGCATCATCCGTCTTATCACTTTGATTCCCTTTCTCAACTCCCCTGAC
CCAACCTACAATATCGGTCGACCGGACTTATGGATCAACATCGAAGCAAA
CTTTGCCATTATCTGCAGCTGCCTCCCCTTCCTCCGAAATTTCCTCCGCC
GCTACGCCCCCCGCTTGATCGGTGAAAACAGCAGTCTTGCGCGTCGTTAT
AAGAGCTACACTTATGATTATACTGGGGGAAGCCGAGGCCGTCGAAAGGA
GGGTCTCACGCAGCTACAGGATGATATTGAGCTTGCTGAGAATGGAGCAA
GTATGCATAGCGGAGTTAGGATATTTAAGGATGTCAAGGTGGAGATTACC
ACGGAGACGATGCCGGATGTAAATGAAAGTAGAGATGGATATAGATGAAT
GGCCATTACTACAATGGCGAATCCTCCTCCGGGGGAGACATACGATTTTG
ACTACTCCCATCGCCATTTGTATACGGCCAATATGGCGGTGATTTCGGCG
GGCTTAATCATCAGCACTAGCTGCTTATTCCTGCGAGTGTATACCAAGGC
ACATTTGCTGCACAAGTTCGGATGGGATGATGTGTCAATTATTCTTGCTT
GGGTGTTCTCTGTGAGCACCCAAGCATGCTCCATCTATGAATACAAACAC
GGGGGCATGGGAGTCCACTTTTGGAATGTGACGCCTGCAGTCTATGAAGT
ATATATCAAGGTTGTCCTCTCCGCAGCCATCGTCTACGTCCCGGCTCTTG
CCCTTGCAAAAATTAGCCTGATTATCCTTTACTACCGCATTTTGTGTCAC
AAACGGTACCAACAATGGATTCTATACGGCATCGCGTTCGTGGTCAGTAG
CTACAGCTTTGCGCTCGTCATGGCCTTCATTTTTGGCTGCCATCCAATTC
AAAAAGGGTGGAATATATCAGTCACGGGGACATGTGTCAACCAATACGCG
CTGTATGTTGCAACAGCCGTGTTGAACATCATCTCCGATATTGCGTTGAT
TCTGGTGCCTATCCCAACGGTTTTGGGGCTGAATATGCCGGGAATACAGA
AGCTAGGCCTCTCTCTGATGTTCATGGTTGGCTGCGCAACTCTTGTCACG
GGCATCATCCGTCTTATCACTTTGATTCCCTTTCTCAACTCCCCTGACCC
AACCTACAATATCGGTCGACCGGACTTATGGATCAACATCGAAGCAAACT
TTGCCATTATCTGCAGCTGCCTCCCCTTCCTCCGAAATTTCCTCCGCCGC
TACGCCCCCCGCTTGATCGGTGAAAACAGCAGTCTTGCGCGTCGTTATAA
GAGCTACACTTATGATTATACTGGGGGAAGCCGAGGCCGTCGAAAGGAGG
GTCTCACGCAGCTACAGGATGATATTGAGCTTGCTGAGAATGGAGCAAGT
ATGCATAGCGGAGTTAGGATATTTAAGGATGTCAAGGTGGAGATTACCAC
GGAGACGATGCCGGATGTAAATGAAAGTAGAGATGGATATAGATGAATGG
CCATTACTACAATGGCGAATCCTCCTCCGGGGGAGACATACGATTTTGAC
TACTCCCATCGCCATTTGTATACGGCCAATATGGCGGTGATTTCGGCGGG
CTTAATCATCAGCACTAGCTGCTTATTCCTGCGAGTGTATACCAAGGCAC
ATTTGCTGCACAAGTTCGGATGGGATGATGTGTCAATTATTCTTGCTTGG
GTGTTCTCTGTGAGCACCCAAGCATGCTCCATCTATGAATACAAACACGG
GGGCATGGGAGTCCACTTTTGGAATGTGACGCCTGCAGTCTATGAAGTAT
ATATCAAGGTTGTCCTCTCCGCAGCCATCGTCTACGTCCCGGCTCTTGCC
CTTGCAAAAATTAGCCTGATTATCCTTTACTACCGCATTTTGTGTCACAA
ACGGTACCAACAATGGATTCTATACGGCATCGCGTTCGTGGTCAGTAGCT
ACAGCTTTGCGCTCGTCATGGCCTTCATTTTTGGCTGCCATCCAATTCAA
AAAGGGTGGAATATATCAGTCACGGGGACATGTGTCAACCAATACGCGCT
GTATGTTGCAACAGCCGTGTTGAACATCATCTCCGATATTGCGTTGATTC
TGGTGCCTATCCCAACGGTTTTGGGGCTGAATATGCCGGGAATACAGAAG
CTAGGCCTCTCTCTGATGTTCATGGTTGGCTGCGCAACTCTTGTCACGGG
CATCATCCGTCTTATCACTTTGATTCCCTTTCTCAACTCCCCTGACCCAA
CCTACAATATCGGTCGACCGGACTTATGGATCAACATCGAAGCAAACTTT
GCCATTATCTGCAGCTGCCTCCCCTTCCTCCGAAATTTCCTCCGCCGCTA
CGCCCCCCGCTTGATCGGTGAAAACAGCAGTCTTGCGCGTCGTTATAAGA
GCTACACTTATGATTATACTGGGGGAAGCCGAGGCCGTCGAAAGGAGGGT
CTCACGCAGCTACAGGATGATATTGAGCTTGCTGAGAATGGAGCAAGTAT
GCATAGCGGAGTTAGGATATTTAAGGATGTCAAGGTGGAGATTACCACGG
AGACGATGCCGGATGTAAATGAAAGTAGAGATGGATATAGATGAATGGCC
ATTACTACAATGGCGAATCCTCCTCCGGGGGAGACATACGATTTTGACTA
CTCCCATCGCCATTTGTATACGGCCAATATGGCGGTGATTTCGGCGGGCT
TAATCATCAGCACTAGCTGCTTATTCCTGCGAGTGTATACCAAGGCACAT
TTGCTGCACAAGTTCGGATGGGATGATGTGTCAATTATTCTTGCTTGGGT
GTTCTCTGTGAGCACCCAAGCATGCTCCATCTATGAATACAAACACGGGG
GCATGGGAGTCCACTTTTGGAATGTGACGCCTGCAGTCTATGAAGTATAT
ATCAAGGTTGTCCTCTCCGCAGCCATCGTCTACGTCCCGGCTCTTGCCCT
TGCAAAAATTAGCCTGATTATCCTTTACTACCGCATTTTGTGTCACAAAC
GGTACCAACAATGGATTCTATACGGCATCGCGTTCGTGGTCAGTAGCTAC
AGCTTTGCGCTCGTCATGGCCTTCATTTTTGGCTGCCATCCAATTCAAAA
AGGGTGGAATATATCAGTCACGGGGACATGTGTCAACCAATACGCGCTGT
ATGTTGCAACAGCCGTGTTGAACATCATCTCCGATATTGCGTTGATTCTG
GTGCCTATCCCAACGGTTTTGGGGCTGAATATGCCGGGAATACAGAAGCT
AGGCCTCTCTCTGATGTTCATGGTTGGCTGCGCAACTCTTGTCACGGGCA
TCATCCGTCTTATCACTTTGATTCCCTTTCTCAACTCCCCTGACCCAACC
TACAATATCGGTCGACCGGACTTATGGATCAACATCGAAGCAAACTTTGC
CATTATCTGCAGCTGCCTCCCCTTCCTCCGAAATTTCCTCCGCCGCTACG
CCCCCCGCTTGATCGGTGAAAACAGCAGTCTTGCGCGTCGTTATAAGAGC
TACACTTATGATTATACTGGGGGAAGCCGAGGCCGTCGAAAGGAGGGTCT
CACGCAGCTACAGGATGATATTGAGCTTGCTGAGAATGGAGCAAGTATGC
ATAGCGGAGTTAGGATATTTAAGGATGTCAAGGTGGAGATTACCACGGAG
ACGATGCCGGATGTAAATGAAAGTAGAGATGGATATAGATGAATGGCCAT
TACTACAATGGCGAATCCTCCTCCGGGGGAGACATACGATTTTGACTACT
CCCATCGCCATTTGTATACGGCCAATATGGCGGTGATTTCGGCGGGCTTA
ATCATCAGCACTAGCTGCTTATTCCTGCGAGTGTATACCAAGGCACATTT
GCTGCACAAGTTCGGATGGGATGATGTGTCAATTATTCTTGCTTGGGTGT
TCTCTGTGAGCACCCAAGCATGCTCCATCTATGAATACAAACACGGGGGC
ATGGGAGTCCACTTTTGGAATGTGACGCCTGCAGTCTATGAAGTATATAT
CAAGGTTGTCCTCTCCGCAGCCATCGTCTACGTCCCGGCTCTTGCCCTTG
CAAAAATTAGCCTGATTATCCTTTACTACCGCATTTTGTGTCACAAACGG
TACCAACAATGGATTCTATACGGCATCGCGTTCGTGGTCAGTAGCTACAG
CTTTGCGCTCGTCATGGCCTTCATTTTTGGCTGCCATCCAATTCAAAAAG
GGTGGAATATATCAGTCACGGGGACATGTGTCAACCAATACGCGCTGTAT
GTTGCAACAGCCGTGTTGAACATCATCTCCGATATTGCGTTGATTCTGGT
GCCTATCCCAACGGTTTTGGGGCTGAATATGCCGGGAATACAGAAGCTAG
GCCTCTCTCTGATGTTCATGGTTGGCTGCGCAACTCTTGTCACGGGCATC
ATCCGTCTTATCACTTTGATTCCCTTTCTCAACTCCCCTGACCCAACCTA
CAATATCGGTCGACCGGACTTATGGATCAACATCGAAGCAAACTTTGCCA
TTATCTGCAGCTGCCTCCCCTTCCTCCGAAATTTCCTCCGCCGCTACGCC
CCCCGCTTGATCGGTGAAAACAGCAGTCTTGCGCGTCGTTATAAGAGCTA
CACTTATGATTATACTGGGGGAAGCCGAGGCCGTCGAAAGGAGGGTCTCA
CGCAGCTACAGGATGATATTGAGCTTGCTGAGAATGGAGCAAGTATGCAT
AGCGGAGTTAGGATATTTAAGGATGTCAAGGTGGAGATTACCACGGAGAC
GATGCCGGATGTAAATGAAAGTAGAGATGGATATAGATGAATGGCCATTA
CTACAATGGCGAATCCTCCTCCGGGGGAGACATACGATTTTGACTACTCC
CATCGCCATTTGTATACGGCCAATATGGCGGTGATTTCGGCGGGCTTAAT
CATCAGCACTAGCTGCTTATTCCTGCGAGTGTATACCAAGGCACATTTGC
TGCACAAGTTCGGATGGGATGATGTGTCAATTATTCTTGCTTGGGTGTTC
TCTGTGAGCACCCAAGCATGCTCCATCTATGAATACAAACACGGGGGCAT
GGGAGTCCACTTTTGGAATGTGACGCCTGCAGTCTATGAAGTATATATCA
AGGTTGTCCTCTCCGCAGCCATCGTCTACGTCCCGGCTCTTGCCCTTGCA
AAAATTAGCCTGATTATCCTTTACTACCGCATTTTGTGTCACAAACGGTA
CCAACAATGGATTCTATACGGCATCGCGTTCGTGGTCAGTAGCTACAGCT
TTGCGCTCGTCATGGCCTTCATTTTTGGCTGCCATCCAATTCAAAAAGGG
TGGAATATATCAGTCACGGGGACATGTGTCAACCAATACGCGCTGTATGT
TGCAACAGCCGTGTTGAACATCATCTCCGATATTGCGTTGATTCTGGTGC
CTATCCCAACGGTTTTGGGGCTGAATATGCCGGGAATACAGAAGCTAGGC
CTCTCTCTGATGTTCATGGTTGGCTGCGCAACTCTTGTCACGGGCATCAT
CCGTCTTATCACTTTGATTCCCTTTCTCAACTCCCCTGACCCAACCTACA
ATATCGGTCGACCGGACTTATGGATCAACATCGAAGCAAACTTTGCCATT
ATCTGCAGCTGCCTCCCCTTCCTCCGAAATTTCCTCCGCCGCTACGCCCC
CCGCTTGATCGGTGAAAACAGCAGTCTTGCGCGTCGTTATAAGAGCTACA
CTTATGATTATACTGGGGGAAGCCGAGGCCGTCGAAAGGAGGGTCTCACG
CAGCTACAGGATGATATTGAGCTTGCTGAGAATGGAGCAAGTATGCATAG
CGGAGTTAGGATATTTAAGGATGTCAAGGTGGAGATTACCACGGAGACGA
TGCCGGATGTAAATGAAAGTAGAGATGGATATAGATGA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_004723-T1.utr5p1 | KJC3_004723-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_004723-T1.utr3p1 | KJC3_004723-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch4 | supercontig | ch4:507439..509293 + |
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