You are here

Home

KJC3_004727-T1, KJC3_004727-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_004727-T1
Unique NameKJC3_004727-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch4:519913..522101-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_004727-T1 ID=KJC3_004727-T1|Name=KJC3_004727-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2189bp|location=Sequence derived from alignment at ch4:519913..522101- (Aspergillus niger KJC3)
ATGAGCGCGGCAAGACAGGCAGGTGCTCTGGATGGTGGGTTTTATACTCA
GTTCTATTCGATCAAGGTTGCTATTGCCGCATACGGATGCTCGAAGAGTC
ACTCGAGCTTTCGTGAGTGTAAACTCCAGAAGCAAGATCTGATGCGGAGC
GACCTCAAATCGGAATTTGATTTAACTTGAGCAGGCTCGTCCTCCTGTAC
GTCTGTACAGTAGGTACTTTTGTTTCGTGATATTGGTAATGCTAATCGAG
TATCCTGGTTGGCCGTTAATGCTATACTCATACAATGAGTCTTTCTCGGG
AGAAGCTTAGCCTACAGATCTGAAATAAGACAGATTCCTCCTTTAACGAC
AGCCTTGTGGTTCGTCGGCTTGTTATAGGGGGTTGTAAATCCGAGTTTTC
TGTTATTAAGGATTCTTATATCTGAGGAAACCATCGATATATGGAGCCAG
TATCTACTCATGGTGGTGCAAGCCATTGACACGAGAGGCGTATAGCCTTG
CAACCAGCGGAGTTTCTATAAAATTTCTACCAAAATAGGGACTTTATCAG
CAAAAGAACACATAATACCACGGTTGGTCGTTCAGGAGCGGGCTTACCGA
GTCGATAGCCGCAGTTGAGTGTCCTAGCTGAAGTCCAGACAGTATTGGTA
AACAATTACCCCAAGGCCGTCGTAAGCCGGCACTAATTATAGATCTGGAA
TCTTGTGCTGATTTGGCGAACCTCTGTTGCAGATAACAAGGGGGATAAGC
TTGGAGCTCGCTAGACCATAGGATATCGGCAACCGTCGCTGAATTGGCGA
CCAACGTGATGCTACTAGTTGGTTGCCTTGTCGACTAACAGAAGTTTCTT
GTTTCCTTTCCATCGATTGATATGAATAGAAACTACCACCATTCAGAACT
AGTGGCAGTGTAGAATTAGCCACACCACCCGGTAGCTAATAGTAACTGCA
GAAGATACTTTATAAAGTCCCTGTTTGGTATGAATTTTATAGAAACTCCG
CTGGTTGCAAGGCTATACGCCTCTCGTGTGCATTTCGCAGGAATCTGTTC
TGGAGACCCTGGATATACAGGTTTATTTTTTTTTATATTTATTTTATAAA
ATGATGTACCGCTGGCCACTCAGAGAAGCCACAGTGATAGATATTTCAAG
ATATTATCGAAGACATTTTCTATGTATAAGGTTTTGGGGCGACAAAGGCG
AGATAGCCCGTGACTCTCCATGCCATAGCATTGGTCGCACAGAACAGACA
TCTCATCTTGTAAATGAGATAACAAGCGTCTGCCTATGGATCGATTATAG
TACTGCCGAACGCGCCATGAAAGACAAAGCCAGGCAGAGCCTCGAAGCCC
GGGTCTTTGAAGAGCGGTAGGAGACACTGGCCGCACAAGACACATTGCAG
TCACATCATATTTTCCTTGATTATCAACCATATGTCAGCACTCCAACGAA
AGATTATCCAGTAAAGGGAAATTAAGGCGAAGAGTACAAGTGACAGACTC
ACTCGATGTGTCTATTTGGCATAGTAACTGGTATGCTTCAGCAATCAAGT
CGCCGTAGACCCGGAGCAAATGCCTTTGATAGATGCTAGTGACCGGGATA
GCTGTTATGGAGCACCGTCAGAAAGTCGCACAATAGAATCTGGACAATAA
GAAGTACGGTCACTTCTGCGAATTCGTAGTTATTTTACTCCTTTTCTTCA
GCGGCCTCCTTCTTATCAGCAATTGAGTCCGTCACTGGTGACTTTGTTGC
TTCTGTTCAGACTCCTGTGAGTGGCGAACAATTCAATGGCGATGCACAGA
AGGCATCTCTTGCGCCTACCCCAGTTTCAACTTCTGCTCCCCCGGCGCCC
TCTGGATCTGGCCTTGTGGCTGTTGACTCTGCGGTTGCTCTGAATAAGCA
TCTGGAGGCCTTGCAGAGTGCTGTCTCGTCTGAGTTCAGCAAGAGCCTTG
GCCGTGAGGTAGAAGGGTTGTACCAGCGCTTTGATGAAGAGCGTCGTAGC
TGGGATGCGGCCTCAGCAGCCAAGCAGGAACAAGTTCTACGTTTGGTCTC
TAGCACCCTGTCTGACAATGTGGAGAAGAACCTGGCTCGCATCGTATCGA
GGAACATTCAGACCGAGGTCGTGCCTGCTTTGAGCGATCTTACCGTTAAA
ATCGAACCCAAGGGGTCCAGTTGGCGGATCAACTCCTGA
back to top

Coding sequence (CDS) from alignment at ch4:519913..522101-

>KJC3_004727-T1 ID=KJC3_004727-T1|Name=KJC3_004727-T1|organism=Aspergillus niger KJC3|type=CDS|length=1200bp|location=Sequence derived from alignment at ch4:519913..522101- (Aspergillus niger KJC3)
CGGCCTCCTTCTTATCAGCAATTGAGTCCGTCACTGGTGACTTTGTTGCT
TCTGTTCAGACTCCTGTGAGTGGCGAACAATTCAATGGCGATGCACAGAA
GGCATCTCTTGCGCCTACCCCAGTTTCAACTTCTGCTCCCCCGGCGCCCT
CTGGATCTGGCCTTGTGGCTGTTGACTCTGCGGTTGCTCTGAATAAGCAT
CTGGAGGCCTTGCAGAGTGCTGTCTCGTCTGAGTTCAGCAAGAGCCTTGG
CCGTGAGGTAGAAGGGTTGTACCAGCGCTTTGATGAAGAGCGTCGTAGCT
GGGATGCGGCCTCAGCAGCCAAGCAGGAACAAGTTCTACGTTTGGTCTCT
AGCACCCTGTCTGACAATGTGGAGAAGAACCTGGCTCGCATCGTATCGAG
GAACATTCAGACCGAGGTCGTGCCTGCTTTGAGCGATCTTACCGTTAAAA
TCGAACCCAAGGGGTCCAGTTGGCGGATCAACTCCTGAATGAGCGCGGCA
AGACAGGCAGGTGCTCTGGATGGTGGGTTTTATACTCAGTTCTATTCGAT
CAAGGTTGCTATTGCCGCATACGGATGCTCGAAGAGTCACTCGAGCTTTC
CGGCCTCCTTCTTATCAGCAATTGAGTCCGTCACTGGTGACTTTGTTGCT
TCTGTTCAGACTCCTGTGAGTGGCGAACAATTCAATGGCGATGCACAGAA
GGCATCTCTTGCGCCTACCCCAGTTTCAACTTCTGCTCCCCCGGCGCCCT
CTGGATCTGGCCTTGTGGCTGTTGACTCTGCGGTTGCTCTGAATAAGCAT
CTGGAGGCCTTGCAGAGTGCTGTCTCGTCTGAGTTCAGCAAGAGCCTTGG
CCGTGAGGTAGAAGGGTTGTACCAGCGCTTTGATGAAGAGCGTCGTAGCT
GGGATGCGGCCTCAGCAGCCAAGCAGGAACAAGTTCTACGTTTGGTCTCT
AGCACCCTGTCTGACAATGTGGAGAAGAACCTGGCTCGCATCGTATCGAG
GAACATTCAGACCGAGGTCGTGCCTGCTTTGAGCGATCTTACCGTTAAAA
TCGAACCCAAGGGGTCCAGTTGGCGGATCAACTCCTGAATGAGCGCGGCA
AGACAGGCAGGTGCTCTGGATGGTGGGTTTTATACTCAGTTCTATTCGAT
CAAGGTTGCTATTGCCGCATACGGATGCTCGAAGAGTCACTCGAGCTTTC
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_004727KJC3_004727Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_004727-T1KJC3_004727-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_004727-T1.cdsKJC3_004727-T1.cdsAspergillus niger KJC3CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_004727-T1.exon2KJC3_004727-T1.exon2Aspergillus niger KJC3exon
KJC3_004727-T1.exon1KJC3_004727-T1.exon1Aspergillus niger KJC3exon


Properties
Property NameValue
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch4supercontigch4:519913..522101 -
Powered by Drupal