You are here

Home

KJC3_004746-T1, KJC3_004746-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_004746-T1
Unique NameKJC3_004746-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch4:583721..585072-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_004746-T1 ID=KJC3_004746-T1|Name=KJC3_004746-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1352bp|location=Sequence derived from alignment at ch4:583721..585072- (Aspergillus niger KJC3)
CTTGACCACCACCATCATCCCCTCAACCGAAAGAAACCCCATATAGGTAC
ACACACACGAATACAATCATGCTCCTTCCACAGACAAGACTGTCCGCCTT
GCGCGCCCTCCGCGCCACAACAGCACCCCGCTCCAGCATCACCACCACCT
CCGCGCTCGCCCGCCTCCTCTCCACTCTCGCCGTCCTCGAACAGCGCGAT
GGCAAGCTTCAAGCCTCCTCCTTGTCCGCTATCGCTGCGGCTCAGAAGCT
CGGTGGTCCCGTGACGGCCTTTGTGGCGGGTGCTGGCGTGAAGGGCACGT
CTGCTGCCGAGGCGGCGCAGATTAAGGGTCTGGACAAGGTGTTGGCGGTG
GAGAATGAGGCTTATGAGAAGGTATCTTTTATCCTTTATCTACTCATTGA
ACATGAAACTGGGGAGGGTAAGTGCTGACGAAATATGGTATAGGGTCTTC
CCGAGAACTACGCCCCGTTGCTCGTCGAGAACATCAAGAAGGGAGAATTC
ACGCACGTCGTGGCTGGCCACTCGGCGTTCGGAAAGAGTTTGTTGCCTCG
TGTTGCGGCTTTGTTGGATGTGCAGCAGGTTTCGGATATCACGGGCATTG
AGAGTGAAGACAGTATGTTTTAATGACTTCGTCCGGTTTGGGGATGGGAA
TTTGCTCCGGTGTCGGAGACGCACAATTCCTATACAAGTATACTAACAAA
GCAATGAACAGCCTTCGTCCGCCCCATCTACGCCGGCAACGCCATCCTGA
CCGTCCAATCCACCGACCCCATCAAGATCCTCACTGTCCGCGGCACCTCC
TTCCAAGGCGTCGAGACCACCGGCGGCAGCGCCTCCGTCACTGAAGGCGT
CGACCCCAACACCCCCGCCCAAACCGAATGGGTGTCCGAGGAGCTCGCCA
AGTCCGAGCGTCCTGACCTTGGTACCGCTACCCGCGTCGTCTCCGGTGGT
CGTGGTCTCAAGTCCAAGGAGGAGTTTGACCGCGTCATCGTTCCCCTGGC
TGATACATTGGGCGCTGCCATCGGTGCTTCCCGTGCTGCTGTGGACAGTG
GCTTCGCGGATAACAGTCTGCAGGTCGGACAGACGGGTAAGAACGTCGCA
CCGCAGTTGTACCTGTGTGCGGGTATCTCGGGTGCTATTCAGCACTTGGC
GGGTATGAAGGATAGTAAGGTTATTGCTGCGATCAACAAGGATCCCGATG
CGCCGATCTTCCAGGTTGCGGATGTTGGACTGGTTGGGGATCTGTTTGAG
AAGGTGCCTGAGTTGACGGAGAAGTTGAAGCAGTGATTTTTCCATCTTTA
TGTTTTCTTTGTATGATGTGGGTGGGGAGGTGAGGCGATAGATATACCAA
TG
back to top

Coding sequence (CDS) from alignment at ch4:583721..585072-

>KJC3_004746-T1 ID=KJC3_004746-T1|Name=KJC3_004746-T1|organism=Aspergillus niger KJC3|type=CDS|length=3141bp|location=Sequence derived from alignment at ch4:583721..585072- (Aspergillus niger KJC3)
CCTTCGTCCGCCCCATCTACGCCGGCAACGCCATCCTGACCGTCCAATCC
ACCGACCCCATCAAGATCCTCACTGTCCGCGGCACCTCCTTCCAAGGCGT
CGAGACCACCGGCGGCAGCGCCTCCGTCACTGAAGGCGTCGACCCCAACA
CCCCCGCCCAAACCGAATGGGTGTCCGAGGAGCTCGCCAAGTCCGAGCGT
CCTGACCTTGGTACCGCTACCCGCGTCGTCTCCGGTGGTCGTGGTCTCAA
GTCCAAGGAGGAGTTTGACCGCGTCATCGTTCCCCTGGCTGATACATTGG
GCGCTGCCATCGGTGCTTCCCGTGCTGCTGTGGACAGTGGCTTCGCGGAT
AACAGTCTGCAGGTCGGACAGACGGGTAAGAACGTCGCACCGCAGTTGTA
CCTGTGTGCGGGTATCTCGGGTGCTATTCAGCACTTGGCGGGTATGAAGG
ATAGTAAGGTTATTGCTGCGATCAACAAGGATCCCGATGCGCCGATCTTC
CAGGTTGCGGATGTTGGACTGGTTGGGGATCTGTTTGAGAAGGTGCCTGA
GTTGACGGAGAAGTTGAAGCAGTGAGGTCTTCCCGAGAACTACGCCCCGT
TGCTCGTCGAGAACATCAAGAAGGGAGAATTCACGCACGTCGTGGCTGGC
CACTCGGCGTTCGGAAAGAGTTTGTTGCCTCGTGTTGCGGCTTTGTTGGA
TGTGCAGCAGGTTTCGGATATCACGGGCATTGAGAGTGAAGACAATGCTC
CTTCCACAGACAAGACTGTCCGCCTTGCGCGCCCTCCGCGCCACAACAGC
ACCCCGCTCCAGCATCACCACCACCTCCGCGCTCGCCCGCCTCCTCTCCA
CTCTCGCCGTCCTCGAACAGCGCGATGGCAAGCTTCAAGCCTCCTCCTTG
TCCGCTATCGCTGCGGCTCAGAAGCTCGGTGGTCCCGTGACGGCCTTTGT
GGCGGGTGCTGGCGTGAAGGGCACGTCTGCTGCCGAGGCGGCGCAGATTA
AGGGTCTGGACAAGGTGTTGGCGGTGGAGAATGAGGCTTATGAGAAGCCT
TCGTCCGCCCCATCTACGCCGGCAACGCCATCCTGACCGTCCAATCCACC
GACCCCATCAAGATCCTCACTGTCCGCGGCACCTCCTTCCAAGGCGTCGA
GACCACCGGCGGCAGCGCCTCCGTCACTGAAGGCGTCGACCCCAACACCC
CCGCCCAAACCGAATGGGTGTCCGAGGAGCTCGCCAAGTCCGAGCGTCCT
GACCTTGGTACCGCTACCCGCGTCGTCTCCGGTGGTCGTGGTCTCAAGTC
CAAGGAGGAGTTTGACCGCGTCATCGTTCCCCTGGCTGATACATTGGGCG
CTGCCATCGGTGCTTCCCGTGCTGCTGTGGACAGTGGCTTCGCGGATAAC
AGTCTGCAGGTCGGACAGACGGGTAAGAACGTCGCACCGCAGTTGTACCT
GTGTGCGGGTATCTCGGGTGCTATTCAGCACTTGGCGGGTATGAAGGATA
GTAAGGTTATTGCTGCGATCAACAAGGATCCCGATGCGCCGATCTTCCAG
GTTGCGGATGTTGGACTGGTTGGGGATCTGTTTGAGAAGGTGCCTGAGTT
GACGGAGAAGTTGAAGCAGTGAGGTCTTCCCGAGAACTACGCCCCGTTGC
TCGTCGAGAACATCAAGAAGGGAGAATTCACGCACGTCGTGGCTGGCCAC
TCGGCGTTCGGAAAGAGTTTGTTGCCTCGTGTTGCGGCTTTGTTGGATGT
GCAGCAGGTTTCGGATATCACGGGCATTGAGAGTGAAGACAATGCTCCTT
CCACAGACAAGACTGTCCGCCTTGCGCGCCCTCCGCGCCACAACAGCACC
CCGCTCCAGCATCACCACCACCTCCGCGCTCGCCCGCCTCCTCTCCACTC
TCGCCGTCCTCGAACAGCGCGATGGCAAGCTTCAAGCCTCCTCCTTGTCC
GCTATCGCTGCGGCTCAGAAGCTCGGTGGTCCCGTGACGGCCTTTGTGGC
GGGTGCTGGCGTGAAGGGCACGTCTGCTGCCGAGGCGGCGCAGATTAAGG
GTCTGGACAAGGTGTTGGCGGTGGAGAATGAGGCTTATGAGAAGCCTTCG
TCCGCCCCATCTACGCCGGCAACGCCATCCTGACCGTCCAATCCACCGAC
CCCATCAAGATCCTCACTGTCCGCGGCACCTCCTTCCAAGGCGTCGAGAC
CACCGGCGGCAGCGCCTCCGTCACTGAAGGCGTCGACCCCAACACCCCCG
CCCAAACCGAATGGGTGTCCGAGGAGCTCGCCAAGTCCGAGCGTCCTGAC
CTTGGTACCGCTACCCGCGTCGTCTCCGGTGGTCGTGGTCTCAAGTCCAA
GGAGGAGTTTGACCGCGTCATCGTTCCCCTGGCTGATACATTGGGCGCTG
CCATCGGTGCTTCCCGTGCTGCTGTGGACAGTGGCTTCGCGGATAACAGT
CTGCAGGTCGGACAGACGGGTAAGAACGTCGCACCGCAGTTGTACCTGTG
TGCGGGTATCTCGGGTGCTATTCAGCACTTGGCGGGTATGAAGGATAGTA
AGGTTATTGCTGCGATCAACAAGGATCCCGATGCGCCGATCTTCCAGGTT
GCGGATGTTGGACTGGTTGGGGATCTGTTTGAGAAGGTGCCTGAGTTGAC
GGAGAAGTTGAAGCAGTGAGGTCTTCCCGAGAACTACGCCCCGTTGCTCG
TCGAGAACATCAAGAAGGGAGAATTCACGCACGTCGTGGCTGGCCACTCG
GCGTTCGGAAAGAGTTTGTTGCCTCGTGTTGCGGCTTTGTTGGATGTGCA
GCAGGTTTCGGATATCACGGGCATTGAGAGTGAAGACAATGCTCCTTCCA
CAGACAAGACTGTCCGCCTTGCGCGCCCTCCGCGCCACAACAGCACCCCG
CTCCAGCATCACCACCACCTCCGCGCTCGCCCGCCTCCTCTCCACTCTCG
CCGTCCTCGAACAGCGCGATGGCAAGCTTCAAGCCTCCTCCTTGTCCGCT
ATCGCTGCGGCTCAGAAGCTCGGTGGTCCCGTGACGGCCTTTGTGGCGGG
TGCTGGCGTGAAGGGCACGTCTGCTGCCGAGGCGGCGCAGATTAAGGGTC
TGGACAAGGTGTTGGCGGTGGAGAATGAGGCTTATGAGAAG
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0050660flavin adenine dinucleotide binding
GO:0009055electron transfer activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_004746KJC3_004746Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_004746-T1KJC3_004746-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_004746-T1.cdsKJC3_004746-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_004746-T1.utr3p1KJC3_004746-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_004746-T1.exon3KJC3_004746-T1.exon3Aspergillus niger KJC3exon
KJC3_004746-T1.exon2KJC3_004746-T1.exon2Aspergillus niger KJC3exon
KJC3_004746-T1.exon1KJC3_004746-T1.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_004746-T1.utr5p1KJC3_004746-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
NoteBUSCO:EOG092649VG
DBxrefInterPro:IPR029035
DBxrefInterPro:IPR033947
DBxrefInterPro:IPR014729
DBxrefInterPro:IPR014731
DBxrefInterPro:IPR001308
DBxrefInterPro:IPR014730
DBxrefPFAM:PF00766
DBxrefPFAM:PF01012
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch4supercontigch4:583721..585072 -
Powered by Drupal