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KJC3_004753-T1, KJC3_004753-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_004753-T1
Unique NameKJC3_004753-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch4:606647..607690+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_004753-T1 ID=KJC3_004753-T1|Name=KJC3_004753-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1044bp|location=Sequence derived from alignment at ch4:606647..607690+ (Aspergillus niger KJC3)
CATCTGTATGCCGTAGAGCTGGCATCATGTAGATAAGAGAGGTGCGCCCG
GAGGGTCGCTGTTGAGTCTGTTGGAGTTCAGTGTCAACTCTAGTCTGCAG
TCCGACCTTAACTAGTATATACCGGTGACACAGTACACATGACAATATGT
ATACTGGACAAAAGATGACGATGGCACCTGGTATGGCTTCTACTACAGAT
AGTAAATCTCTACATAGCATACAACTAATATATGCGTACCAGTCAATATC
CCCAGTCAAGTCCCATTGGAGATCCTGCTCCTCCTCTTCGGTCTCTGCAG
ACCAATCGAGCAATACATGCTCCTCTTCTCAGCCCCCGAGCTCATCCATC
GACTTTCCTCCAAGCATCTCATGACACGAGAAGCCAACGGCGACACTCTC
CTGCACATTCTCGCTAAAGACCAAGGTCCATCGCGACAACTGGCGCGGGC
TCTGTTCTCCAGGAAGGACCTGGACGTCAACGTGCAGAACAACAACTGGA
AGATCCCCTTAGTATGTGCCGCGCAATACGGGAATCACTGGCTCGTCAAA
CTACTGCTCGAGCGGGGCGATTTCAACAGCTACATGCTGGACTACTTCTA
CTTCACGCCGCTGGTGTGGGCAGCCAAGAAGCAGGACGAGGGGTTAGTGA
AGATTTTGCTGGCGAACAGGAATGTTCGGCCAAATGAAGTGGACATTTTC
CGGCGAACGGCACTGTCATATGCAGCGGAATATCGAAATGAGGCGATTGT
GCGGTTGTTGCTCGCGGATGAGGATGTTGATGCGGAGTGGAGTGATGAGA
CGGCGCGATCACCGCTGTCTTATGCGGCAGAGGCTGGGAGTAAGAGAATA
GTGGAGTTGCTGTTGGATCGCGAGGAGGTGAATGCACATTCGGTGGATTC
GTTTATGAAGACGCCGTTTGTGTGGGCAGCGGAGTATGGACATTTGGAGA
TTATGATGAGATTGGAGGAGTGTGAGTATTAGCTATCAGCTTTGTTCATA
TTACTTTGTACGTAGTTGATGATGCTTTACTAGTTACTGTCATG
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Coding sequence (CDS) from alignment at ch4:606647..607690+

>KJC3_004753-T1 ID=KJC3_004753-T1|Name=KJC3_004753-T1|organism=Aspergillus niger KJC3|type=CDS|length=1548bp|location=Sequence derived from alignment at ch4:606647..607690+ (Aspergillus niger KJC3)
ATGTATACTGGACAAAAGATGACGATGGCACCTGTCAATATCCCCAGTCA
AGTCCCATTGGAGATCCTGCTCCTCCTCTTCGGTCTCTGCAGACCAATCG
AGCAATACATGCTCCTCTTCTCAGCCCCCGAGCTCATCCATCGACTTTCC
TCCAAGCATCTCATGACACGAGAAGCCAACGGCGACACTCTCCTGCACAT
TCTCGCTAAAGACCAAGGTCCATCGCGACAACTGGCGCGGGCTCTGTTCT
CCAGGAAGGACCTGGACGTCAACGTGCAGAACAACAACTGGAAGATCCCC
TTAGTATGTGCCGCGCAATACGGGAATCACTGGCTCGTCAAACTACTGCT
CGAGCGGGGCGATTTCAACAGCTACATGCTGGACTACTTCTACTTCACGC
CGCTGGTGTGGGCAGCCAAGAAGCAGGACGAGGGGTTAGTGAAGATTTTG
CTGGCGAACAGGAATGTTCGGCCAAATGAAGTGGACATTTTCCGGCGAAC
GGCACTGTCATATGCAGCGGAATATCGAAATGAGGCGATTGTGCGGTTGT
TGCTCGCGGATGAGGATGTTGATGCGGAGTGGAGTGATGAGACGGCGCGA
TCACCGCTGTCTTATGCGGCAGAGGCTGGGAGTAAGAGAATAGTGGAGTT
GCTGTTGGATCGCGAGGAGGTGAATGCACATTCGGTGGATTCGTTTATGA
AGACGCCGTTTGTGTGGGCAGCGGAGTATGGACATTTGGAGATTATGATG
AGATTGGAGGAGTGTGAGTATTAGATGTATACTGGACAAAAGATGACGAT
GGCACCTGTCAATATCCCCAGTCAAGTCCCATTGGAGATCCTGCTCCTCC
TCTTCGGTCTCTGCAGACCAATCGAGCAATACATGCTCCTCTTCTCAGCC
CCCGAGCTCATCCATCGACTTTCCTCCAAGCATCTCATGACACGAGAAGC
CAACGGCGACACTCTCCTGCACATTCTCGCTAAAGACCAAGGTCCATCGC
GACAACTGGCGCGGGCTCTGTTCTCCAGGAAGGACCTGGACGTCAACGTG
CAGAACAACAACTGGAAGATCCCCTTAGTATGTGCCGCGCAATACGGGAA
TCACTGGCTCGTCAAACTACTGCTCGAGCGGGGCGATTTCAACAGCTACA
TGCTGGACTACTTCTACTTCACGCCGCTGGTGTGGGCAGCCAAGAAGCAG
GACGAGGGGTTAGTGAAGATTTTGCTGGCGAACAGGAATGTTCGGCCAAA
TGAAGTGGACATTTTCCGGCGAACGGCACTGTCATATGCAGCGGAATATC
GAAATGAGGCGATTGTGCGGTTGTTGCTCGCGGATGAGGATGTTGATGCG
GAGTGGAGTGATGAGACGGCGCGATCACCGCTGTCTTATGCGGCAGAGGC
TGGGAGTAAGAGAATAGTGGAGTTGCTGTTGGATCGCGAGGAGGTGAATG
CACATTCGGTGGATTCGTTTATGAAGACGCCGTTTGTGTGGGCAGCGGAG
TATGGACATTTGGAGATTATGATGAGATTGGAGGAGTGTGAGTATTAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_004753KJC3_004753Aspergillus niger KJC3gene


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_004753-T1.utr5p1KJC3_004753-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_004753-T1.exon1KJC3_004753-T1.exon1Aspergillus niger KJC3exon
KJC3_004753-T1.exon2KJC3_004753-T1.exon2Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_004753-T1.cdsKJC3_004753-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_004753-T1.utr3p1KJC3_004753-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_004753-T1KJC3_004753-T1-proteinAspergillus niger KJC3polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR036770
DBxrefInterPro:IPR020683
DBxrefInterPro:IPR002110
DBxrefPFAM:PF13637
DBxrefPFAM:PF12796
DBxrefPFAM:PF00023
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch4supercontigch4:606647..607690 +
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