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KJC3_004767-T1, KJC3_004767-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_004767-T1
Unique NameKJC3_004767-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch4:657588..658956+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_004767-T1 ID=KJC3_004767-T1|Name=KJC3_004767-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1369bp|location=Sequence derived from alignment at ch4:657588..658956+ (Aspergillus niger KJC3)
AGATCCCTCAAATATCATAGCATAGCTACAAGAATATTTAAGTTCAGTCA
AATATAAACCATGGCCGACGACAGCGCGGTAAGAGACGTCCCAGAACTGC
CAGGAACCACTCCTGCACAGCACACAGTACACTCTCCGTCGCGATCCCCA
CAGGCGGAGCAGTGCAACTTGCTCCGCTTTTGTTTTACTCTTGAATTCTT
AATTTTGCCCCCATTAACCAAACCAATTCACTCCAATTGATCTCTGCTAT
TCTTTCTATTCTCACTTTTTGACCGCTTTTGAGCATTCACTCATACATCC
CCTCCTACAGCAGGCAACAACATCTCAACCTCAACCTCAGCCTCAAACTA
ATCCTCCACCGCAAACTACTTCTACTACATCTCCCTTCCCTCCCCAGAAC
CAACAACCACCGTCACAACCACACCCATCTCTTAATCCCGACAAAGATAA
AATCATGGCTTCCGACTCAGCTGCAAACACCCCCGGTGCCGACTCCGCCG
CTGCAACCCCCTCCGCCACCACTCAAGTCCGTCCCGGCGGCGCCCCGATA
AGAAGATACATGAATGAGAAGATAGTGCCTCATCTTCTCGATGGGATGAC
GGTCGTTGCGAAGGAGCAGTGCGTACACCACTATTCATTCTGACTGTATT
CTACTCAAGCGAAGTGCCATCGTAAGGAAGCAAGCTGATGGTGTCTATGA
TGTGATTTGAATAGGCCACCCAACCCCCTCCGCGTCCTCGGCGAATACCT
CATCCAGAAGAGCAACGAGGTCGAACAGCAGGGTGTTTCGAAGACTCCGG
AGTAGACGTTCTTGCTTTATCGACTACTTATTGGTGCTGAATGGTAACGT
GTGTTGTGCGCTACACATGAGACAATCATCGGGCCCAGAAACTATCCAAC
GCATGGTGGAATAAGACTGGATGCATACGTACATCAGCATGTACCTTCTG
TACGTGACGCTGATACTTTCAAGGTTAATCTCCATCTGCATAAGAGTAAC
AAGGAGATGAATGCTGATCCGGTCTAGTCTAGTGTTCAGTCGGAGACGCA
CCCCCCACACAGATGAAATAGAATGGTTGGTCTTGGGTAGCTTTGGCATA
TGGAGAGGTTACCTGCTCGCTATGGGTTTCTACTCCTTAGGGCAGTGAGT
GAGTTTATCCTCGGCTCTATGTCTATATTGGATGGAGATAATGCGGTCAT
GAAGTTATGATTTGGATGGATATGTATGAAGAATTGGTTTGGTGGCTAGA
TATCTGTTGTCTTGGGATTATTAGGCACGGATTTTCTCATGGCCAGGCAG
TCATTGTGTGCTGCATGTTGCCTAGATACTAGACACCAGATAAGATTTTT
GCTTCTACGCCTACGTTCT
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Coding sequence (CDS) from alignment at ch4:657588..658956+

>KJC3_004767-T1 ID=KJC3_004767-T1|Name=KJC3_004767-T1|organism=Aspergillus niger KJC3|type=CDS|length=1242bp|location=Sequence derived from alignment at ch4:657588..658956+ (Aspergillus niger KJC3)
ATGGCCGACGACAGCGCGGCAACAACATCTCAACCTCAACCTCAGCCTCA
AACTAATCCTCCACCGCAAACTACTTCTACTACATCTCCCTTCCCTCCCC
AGAACCAACAACCACCGTCACAACCACACCCATCTCTTAATCCCGACAAA
GATAAAATCATGGCTTCCGACTCAGCTGCAAACACCCCCGGTGCCGACTC
CGCCGCTGCAACCCCCTCCGCCACCACTCAAGTCCGTCCCGGCGGCGCCC
CGATAAGAAGATACATGAATGAGAAGATAGTGCCTCATCTTCTCGATGGG
ATGACGGTCGTTGCGAAGGAGCAGCCACCCAACCCCCTCCGCGTCCTCGG
CGAATACCTCATCCAGAAGAGCAACGAGGTCGAACAGCAGGGTGTTTCGA
AGACTCCGGAGTAGATGGCCGACGACAGCGCGGCAACAACATCTCAACCT
CAACCTCAGCCTCAAACTAATCCTCCACCGCAAACTACTTCTACTACATC
TCCCTTCCCTCCCCAGAACCAACAACCACCGTCACAACCACACCCATCTC
TTAATCCCGACAAAGATAAAATCATGGCTTCCGACTCAGCTGCAAACACC
CCCGGTGCCGACTCCGCCGCTGCAACCCCCTCCGCCACCACTCAAGTCCG
TCCCGGCGGCGCCCCGATAAGAAGATACATGAATGAGAAGATAGTGCCTC
ATCTTCTCGATGGGATGACGGTCGTTGCGAAGGAGCAGCCACCCAACCCC
CTCCGCGTCCTCGGCGAATACCTCATCCAGAAGAGCAACGAGGTCGAACA
GCAGGGTGTTTCGAAGACTCCGGAGTAGATGGCCGACGACAGCGCGGCAA
CAACATCTCAACCTCAACCTCAGCCTCAAACTAATCCTCCACCGCAAACT
ACTTCTACTACATCTCCCTTCCCTCCCCAGAACCAACAACCACCGTCACA
ACCACACCCATCTCTTAATCCCGACAAAGATAAAATCATGGCTTCCGACT
CAGCTGCAAACACCCCCGGTGCCGACTCCGCCGCTGCAACCCCCTCCGCC
ACCACTCAAGTCCGTCCCGGCGGCGCCCCGATAAGAAGATACATGAATGA
GAAGATAGTGCCTCATCTTCTCGATGGGATGACGGTCGTTGCGAAGGAGC
AGCCACCCAACCCCCTCCGCGTCCTCGGCGAATACCTCATCCAGAAGAGC
AACGAGGTCGAACAGCAGGGTGTTTCGAAGACTCCGGAGTAG
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_004767KJC3_004767Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_004767-T1KJC3_004767-T1-proteinAspergillus niger KJC3polypeptide


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_004767-T1.utr5p1KJC3_004767-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_004767-T1.exon1KJC3_004767-T1.exon1Aspergillus niger KJC3exon
KJC3_004767-T1.exon2KJC3_004767-T1.exon2Aspergillus niger KJC3exon
KJC3_004767-T1.exon3KJC3_004767-T1.exon3Aspergillus niger KJC3exon
KJC3_004767-T1.exon4KJC3_004767-T1.exon4Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_004767-T1.cdsKJC3_004767-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_004767-T1.utr3p1KJC3_004767-T1.utr3p1Aspergillus niger KJC3three_prime_UTR
KJC3_004767-T1.utr3p2KJC3_004767-T1.utr3p2Aspergillus niger KJC3three_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR007858
DBxrefPFAM:PF05186
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch4supercontigch4:657588..658956 +
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